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The map label for this gene is yedZ [H]

Identifier: 126452046

GI number: 126452046

Start: 3680190

End: 3680915

Strand: Reverse

Name: yedZ [H]

Synonym: BURPS1106A_3768

Alternate gene names: 126452046

Gene position: 3680915-3680190 (Counterclockwise)

Preceding gene: 126452306

Following gene: 126455360

Centisome position: 92.29

GC content: 69.7

Gene sequence:

>726_bases
ATGGAGAACGACATGCAATCCTCGACATTTGCCGGCTCGGCAAGCCCGGGCGCCGGCGCGCGCGGCCGCGCACCGCGCCG
GGATGCCGGCCGCGCGGGCGGCGCGCCCGGCTGGCTCGCGCCCGTGAAGATCGCCGCGTTCGTCGCGGCGCTGTATCCGC
TCGCGCGTATCGTGTTCTTCGGCGTGACGGACCGGCTCGGCGCGAACCCGATCGAGTTCGTCACGCGCTCGACGGGGCTC
TGGACGCTCGTGTTCCTGTGCATCACGCTCGCCGTCACGCCGCTGCGCCGGCTGACGGGCATCAACGCGCTGCTGCGGTT
GCGGCGCATGCTCGGGCTCTACGCATTCTTCTACGCGGTGCTGCACTTCACGACCTACATCTGGTTCGACAAGTGGTTCG
ATGTGGTGGAGATCGCGAAGGACGTCGTGAAGCGTCCGTTCATCACCGTCGGCTTCGCCGCGTTCGTGCTGCTGATTCCG
CTTGCCGCGACGTCGCCGCGCGCGATCGCGAGGCGGCTCGGCCGGCACTGGCAGACGCTGCACAAGGCGATCTATGCGAT
CGCCGCGTTCGGCATCCTGCATTTCTGGTGGATGAGGGCGGGCAAGCACGATCTCGCACTGCCGAAGCTGTACGGCGCGA
TCGTGCTCGTGCTGCTCGGCTGGCGCGTGCTCGTGTGGGCGCGGCAACGCTGGGGCGCAGCGGCGGCGGGCGGACGCGCG
CCGTAG

Upstream 100 bases:

>100_bases
CACGCCGAAGCGCAAGACGCTGATGTTCAACGGCTATGGCGATTGGGTCGCGTCGATGTATCGCGGGATGGATCTGAAGA
AATACTTCTGAGTACGACAG

Downstream 100 bases:

>100_bases
CGCGAGGGGCGGGCGCGCTCGGGGCGCGCGCGTTGCACGATGTGGTTACGGCTGCGGCTGCGGCTGCGGCGCGGGTTGGC
CCGGCCGCGTTGGCCGCCTG

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MENDMQSSTFAGSASPGAGARGRAPRRDAGRAGGAPGWLAPVKIAAFVAALYPLARIVFFGVTDRLGANPIEFVTRSTGL
WTLVFLCITLAVTPLRRLTGINALLRLRRMLGLYAFFYAVLHFTTYIWFDKWFDVVEIAKDVVKRPFITVGFAAFVLLIP
LAATSPRAIARRLGRHWQTLHKAIYAIAAFGILHFWWMRAGKHDLALPKLYGAIVLVLLGWRVLVWARQRWGAAAAGGRA
P

Sequences:

>Translated_241_residues
MENDMQSSTFAGSASPGAGARGRAPRRDAGRAGGAPGWLAPVKIAAFVAALYPLARIVFFGVTDRLGANPIEFVTRSTGL
WTLVFLCITLAVTPLRRLTGINALLRLRRMLGLYAFFYAVLHFTTYIWFDKWFDVVEIAKDVVKRPFITVGFAAFVLLIP
LAATSPRAIARRLGRHWQTLHKAIYAIAAFGILHFWWMRAGKHDLALPKLYGAIVLVLLGWRVLVWARQRWGAAAAGGRA
P
>Mature_241_residues
MENDMQSSTFAGSASPGAGARGRAPRRDAGRAGGAPGWLAPVKIAAFVAALYPLARIVFFGVTDRLGANPIEFVTRSTGL
WTLVFLCITLAVTPLRRLTGINALLRLRRMLGLYAFFYAVLHFTTYIWFDKWFDVVEIAKDVVKRPFITVGFAAFVLLIP
LAATSPRAIARRLGRHWQTLHKAIYAIAAFGILHFWWMRAGKHDLALPKLYGAIVLVLLGWRVLVWARQRWGAAAAGGRA
P

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=157, Percent_Identity=36.3057324840764, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 26617; Mature: 26617

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA