| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452039
Identifier: 126452039
GI number: 126452039
Start: 906290
End: 906613
Strand: Direct
Name: 126452039
Synonym: BURPS1106A_0922
Alternate gene names: NA
Gene position: 906290-906613 (Clockwise)
Preceding gene: 126454230
Following gene: 126454372
Centisome position: 22.72
GC content: 59.88
Gene sequence:
>324_bases ATGGCTGAAACTCTCCCGACCGAATATTTCATTCAGGGCATCACGAAAGATGGGAAGAAGTTTCGGCCGAGCGACTGGTC CGAGCGTCTCGCCGGTGTGATGTCGTGTTACGGTCCGGGGGCGAGCGGGCCCAATGCCCGCCTTCAGTATTCGCGCTACG TGCGGCCGACGTTGCTCGGCGATCTGAAATGCGTGATCGTCGATGCCCGGCTGCGCGACGTCGAGCCGATGGCGTTCGAT TTCGTGATGAATTTCGCGAAGGACAACAACCTCGTCGTCACCGAGGCGTGCGAGCTGCCCGATTACGGCAAGACGCAAGA GTAG
Upstream 100 bases:
>100_bases CGCGCTCGTCGCGAGCCGTCGCGAAACCGCTTCCATTGTGTTCGAAGTGTCCAGGCGCGGCTGCGCCGGTGCACTGCTGG GCCGTCACTTGGGTACCCTC
Downstream 100 bases:
>100_bases CGGGCGCACCCGCGGCGCGGCGCGCGGCTTTCCGGCGTCGGCGGGTGTGGGCGGTGTCGGGCGATCGGGCGGCGGGACAT CGCGGCGAAGCGCGAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MAETLPTEYFIQGITKDGKKFRPSDWSERLAGVMSCYGPGASGPNARLQYSRYVRPTLLGDLKCVIVDARLRDVEPMAFD FVMNFAKDNNLVVTEACELPDYGKTQE
Sequences:
>Translated_107_residues MAETLPTEYFIQGITKDGKKFRPSDWSERLAGVMSCYGPGASGPNARLQYSRYVRPTLLGDLKCVIVDARLRDVEPMAFD FVMNFAKDNNLVVTEACELPDYGKTQE >Mature_106_residues AETLPTEYFIQGITKDGKKFRPSDWSERLAGVMSCYGPGASGPNARLQYSRYVRPTLLGDLKCVIVDARLRDVEPMAFDF VMNFAKDNNLVVTEACELPDYGKTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12016; Mature: 11885
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETLPTEYFIQGITKDGKKFRPSDWSERLAGVMSCYGPGASGPNARLQYSRYVRPTLLG CCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHC DLKCVIVDARLRDVEPMAFDFVMNFAKDNNLVVTEACELPDYGKTQE CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure AETLPTEYFIQGITKDGKKFRPSDWSERLAGVMSCYGPGASGPNARLQYSRYVRPTLLG CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHC DLKCVIVDARLRDVEPMAFDFVMNFAKDNNLVVTEACELPDYGKTQE CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA