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The map label for this gene is hrpA [H]

Identifier: 126451994

GI number: 126451994

Start: 2663805

End: 2667932

Strand: Reverse

Name: hrpA [H]

Synonym: BURPS1106A_2698

Alternate gene names: 126451994

Gene position: 2667932-2663805 (Counterclockwise)

Preceding gene: 126454775

Following gene: 126455341

Centisome position: 66.89

GC content: 71.32

Gene sequence:

>4128_bases
ATGTCGAATGTACCTAAAAGTCCCGCGCAAAAACGTGCGGGCACGCCGGGCGAGCCGCAGCCCGCCGGCGCCGCTGCGCC
GCGGCCGCCGCGCCCCCGGCAGGCGCCGCCCGCGCAGGCGCGCGCGCCGCGCACCGAGCGCCGCGACGCGGGTCCCGAAG
CCGCCCGCGCGCCGCATGCGCCGCGCACGCGGTGCGCGCCGAATCCCGTTCCGCCGATCACGTTTGCCGAAAGCCTGCCC
GTGTCGGGCAAGCGCGACGAGATCGCGCGCGCGATCGCCGCTCACCCGGTCGTGATCGTCTGCGGCGAGACGGGCTCGGG
CAAGACCACCCAGTTGCCGAAGATCTGCCTGGCGCTCGGCCGCGGCCTCGGCGCGGGCGGCGCGGGCCTGATCGGCCACA
CGCAGCCGCGCCGGCTCGCGGCGTCGTCGACGGGCCGCCGGATCGCCGAGGAGCTCGGCACGCCGTTCGGCGAGGTGGTC
GGCTACAAGGTGCGCTTCACCGACAACCTCGCCCCGGGCGCCTCGGTCAAGCTGATGACGGACGGGATCCTGCTCGCCGA
GACGCAGACCGACCCGCTGCTGAAGGCGTACGACACCCTCATCATCGACGAGGCGCACGAGCGCAGCCTGAACATCGATT
TCCTGCTCGGCTACCTCCGGCAGATCCTGCCGAGGCGGCCGGACCTGAAGCTGATCGTCACGTCGGCGACGATCGACGCC
GAGCGCTTCGCGCGCCATTTCGGCAGCGACGAGCGGCCCGCGCCGGTGATCGAGGTGAGCGGGCGGCTGTATCCGGTCGA
GGTGCGCTACCGGCCGATCGCCGACGACCGGCCGGCCGCCGTCCGGCACGCGGAAGGCGCGAGCTCGGGCCGCGATCGCG
CGAAGAGCGCGCGCGAGGCCGAGCGCGACCTGATGGACGGCATCGTCGACGCGGTCGACGAGCTGTGCCGCGAGGGCCCC
GGCGACGTGCTCGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACGCGGCCGAGGCGCTGCGCAAGCACCATCCGCCGCA
CACCGAGATCCTGCCGCTGTTCGCGCGGCTGTCCGCGGCCGAGCAGGAGCGCGTGTTCAAGGCGTCGAACGCGCGGCGGA
TCGTGCTCGCGACGAACGTCGCCGAAACGTCGCTGACCGTGCCGGGCATCCGCTATGTCGTCGACACGGGCTTGGCGCGC
GTGAAGCGCTATTCGTACCGGAACAAGGTCGAGCAGTTGCAGATCGAGCCGATCTCGCAGGCGGCCGCGAACCAGCGCGC
GGGCCGCTGCGGCCGCGTCGCCGACGGCGTCTGCATCCGCCTCTACGAGGAAAGCGATTTCGCCGGCCGCGCACGCTTCA
CCGATCCGGAAATCCTGCGCTCGTCGCTCGCGTCGGTGATCCTGCGGATGAAATCGCTGCATCTGTCGGCGATCGAATCG
TTTCCGTTCATCGAGCCGCCGCCGGGCCGCGCGATCGCGGACGGCTATCAACTGCTCAACGAGCTCGGCGCGGTCGACGA
CGAGAACGCGCTCACGCCGCTCGGCCGCGAGCTCGCGCGGCTGCCGCTCGATCCGCGCGTCGGCCGGATGATCCTCGCCG
CGCGCGACCAGCAGGCGCTGCGCGAAGTGCTCGTGATCGCGAGCGCGCTGTCCGTGCAGGACCCGCGCGAGCGCCCGGTC
GACGCGCAGGAGCAGGCCGACCAGGCGCACCGGCGCTTCGCCGACGAGCGCTCCGAGTTCCTTCAGTGGCTGCGGATCTG
GGCGTGGTTCGAGGAGGCGGTCGCGCACAAGAAGTCGAACCGGCAACTCGTCGACGCGTGCCGGCAGCATTTCCTGTCGC
ACCTGCGGCTGCGCGAATGGCGCGATGTCCACTCGCAGCTCCTGACCGTCGTGCGCGAGCACGGCTGGCGGCTGAACGAA
GCCGATGCGACGTTCGAGCAGATCCATCTGTCGCTGTTGACGGGCCTGCTCGGCAACATCGGCTTCAAGGCCGAGGACGA
GCCGCACTACCTCGGCGCGCGCGGCATCAAGTTCCATCTGTGGCCGGGCTCCGCGCTCGTGAAGAAGGCGGGGCGCTGGG
TGATGGCGGCCGAGCTCGTCGAGACGAGCCGCCTCTATGCGCGCTGCATCGCGAAGATCGAGCCCGAATGGATCGAGCGG
ATCGGCGCGCATCTGCTGAAGAAATCGCTGTCCGAGCCGCACTGGGAGAAGCGGCCCGCGCAGGTCGCCGCGTTCGAGCG
CGCGACGCTGTACGGGCTCACCATCTATCACCGGCGGCGCGTCGCGTTCGGCCGGCAGGACCCGGCGCGCGCGCGCGAGC
TGTTCATCCGCGGCGCGCTCGTCGACGGCGAATTCGACACGAAGCTCGCGTTCTTCGCGCACAACCGCAAGCTGCTCGCC
GACATCGAGCAGCTCGAGCACAAATCGCGCCGCCAGGACGTGCTCGTCGACGACGAGCTGATTCACGCGTTCTACGATCA
GGCGATTCCGGCCGGCATTCACACGGGCGCCGCGTTCGAGCGCTGGTATCGCGACGAGGTGAGCAAGAGCGGGCAGCCGG
AAGACAAGCTGCGCCTGCTGTATCTGTCGCGCGACGATCTGATGCGCCACGAGGCGGCGGGCGTGACGACCGAGCTGTTT
CCGAAGCGCGTGACGATGGCGGGCGTCGAGATGGCGCTCGCGTACCACTTCGAGCCGGGCTCGCCGCGCGACGGCGTGAC
GCTCGCGGTGCCGCTCTTCGCGCTGAACCAGGTCGACGCGCGCCGCGCCGAATGGCTCGTGCCCGGCATGCTCAAGGAGA
AGGCGCATCTGCTGCTGAAATCGCTGCCGCAGAAGCTGCGCCGCCATTGCGTGCCGCTGCCGGAGTACGCGGCGGGCTTC
GTCGAGCGCGCCGGGCGCGAGCGCTTCGGCGCGGGCGGCCTCGTCGACGCGCTGATCGCCGACGTTCGCGAGCAGACGCA
GGTCGCGACGAAAACGTCCGATTTCAAGCTGGAGACGCTGCCCGCGCACCTGTTCATGAACTTCAAGGTGATCGACGAGC
ACGGCCGGCAACTCGCGATGGGGCGCAATCTCGCGCAACTGCGCGCGGAACTGGGCGCGCAGGCGCAGCAGCACTTCCAG
AAGATCGCCGCCGCGGCGACGCTCGCGCCGGCGGGCGAGCCCGCCGCGGCGGCCGCCGGCGCGAGCGGCGCGCGGGCACG
GCGCGCGCCGCTCGGCGCGCCGCCGCGGGCGGCCGAGCCGGCGGCGCAAGCGGGCGCGGCCGCCGGCGCGACCGCGCTCT
ACGAGCACCTGACGACGTGGAACTTCGGCAAGCTGCCGGAACTCCTCGAAATCCGCCGGCGCGGCGAGACGCTGTTCGGC
TACCCGGCGCTCGTCGATCGCGGCACGCATTGCGACGTCGAGGTGTTCGATTCGCCCGACGAGGCGGCGCGGATCCACCG
CGCGGGCCTGCGGCGCCTGTTCGCGCTGCAACTGAAGGAGCCGATCAAGTATCTGGAGAAGAACCTGCCGGGGCTGCGCG
AGATGGCGATGCAGTACATGTCGCTCGGCACGCAGGACGAGCTGCGCGACCAGCTGATCGCGACCGCGCTCGACCGCGCG
TGCCTGCAGGAACCGCTGCCCGCCGACGACGCGAGCTTCCACGCGCGCCGCGACGAGGGCAGGAGCCGCCTGAATCTGCT
CGCGCAGGAGATCGCGCGGCTCGTCGGGCAGATCCTCGCCGAGTACGCGGGGCTCGCGAAGAAGCTCGCGCAGGCCAAGC
CGTTCCCGGCCGCGCACGCGGACATGCAGGGCCAGCTCGCCGCGCTCGTCGGCAAGCGCTTCGTCGTCGATACGCCTTAC
GCGCAGCTTGCGCACTTCCCGCGCTACCTGAAGGGAATCGCGCTGCGCATCGACAAGCTGAAGGCCGATCCCGCGCGCGA
CGCGCGGCAGGCGGCCGAGCTGCAGCCGCTCGCGCAGCATTATCAGCGCTCGGTTGCGCAGCGCGGCGGCGTCGCGGACG
CGCGGCTCGCCGAATTCCGCTGGCTGCTCGAGGAGCTGCGGATCTCGCTTTTCGCGCAGGAGCTGCGCACGCCGATGCCG
GTATCGGTCAAGCGGCTCTACAAAGTGTGGGAGTCGATGCAGCGCTGA

Upstream 100 bases:

>100_bases
TGATGGACGGCTTCGTCGACGGACGGCTGGGGCGCGGCGCCCGACTGGGCGGCGGGAAGGTCGGTTTGGGAATTCATGGG
CGGGATTATAATGCGCCCCC

Downstream 100 bases:

>100_bases
GCGCCGTTCAAGGTATGCGGGTTCACACTCGGGCGCGAGACGTCAACCGGCGGCGTTCTCGCGCGTTTTACAATCACGCC
AGTCCCACGACGTGAGTCTT

Product: ATP-dependent helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1375; Mature: 1374

Protein sequence:

>1375_residues
MSNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRTERRDAGPEAARAPHAPRTRCAPNPVPPITFAESLP
VSGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALGRGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVV
GYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDA
ERFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREAERDLMDGIVDAVDELCREGP
GDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLAR
VKRYSYRNKVEQLQIEPISQAAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES
FPFIEPPPGRAIADGYQLLNELGAVDDENALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRERPV
DAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNE
ADATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER
IGAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLA
DIEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFERWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELF
PKRVTMAGVEMALAYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF
VERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQ
KIAAAATLAPAGEPAAAAAGASGARARRAPLGAPPRAAEPAAQAGAAAGATALYEHLTTWNFGKLPELLEIRRRGETLFG
YPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRA
CLQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHADMQGQLAALVGKRFVVDTPY
AQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMP
VSVKRLYKVWESMQR

Sequences:

>Translated_1375_residues
MSNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRTERRDAGPEAARAPHAPRTRCAPNPVPPITFAESLP
VSGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALGRGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVV
GYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDA
ERFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREAERDLMDGIVDAVDELCREGP
GDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLAR
VKRYSYRNKVEQLQIEPISQAAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES
FPFIEPPPGRAIADGYQLLNELGAVDDENALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRERPV
DAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNE
ADATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER
IGAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLA
DIEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFERWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELF
PKRVTMAGVEMALAYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF
VERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQ
KIAAAATLAPAGEPAAAAAGASGARARRAPLGAPPRAAEPAAQAGAAAGATALYEHLTTWNFGKLPELLEIRRRGETLFG
YPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRA
CLQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHADMQGQLAALVGKRFVVDTPY
AQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMP
VSVKRLYKVWESMQR
>Mature_1374_residues
SNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRTERRDAGPEAARAPHAPRTRCAPNPVPPITFAESLPV
SGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALGRGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVG
YKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDAE
RFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREAERDLMDGIVDAVDELCREGPG
DVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARV
KRYSYRNKVEQLQIEPISQAAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIESF
PFIEPPPGRAIADGYQLLNELGAVDDENALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRERPVD
AQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEA
DATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIERI
GAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLAD
IEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFERWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELFP
KRVTMAGVEMALAYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGFV
ERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQK
IAAAATLAPAGEPAAAAAGASGARARRAPLGAPPRAAEPAAQAGAAAGATALYEHLTTWNFGKLPELLEIRRRGETLFGY
PALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRAC
LQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHADMQGQLAALVGKRFVVDTPYA
QLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMPV
SVKRLYKVWESMQR

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=664, Percent_Identity=35.8433734939759, Blast_Score=406, Evalue=1e-113,
Organism=Homo sapiens, GI68509926, Length=666, Percent_Identity=35.4354354354354, Blast_Score=393, Evalue=1e-109,
Organism=Homo sapiens, GI17999539, Length=662, Percent_Identity=35.1963746223565, Blast_Score=388, Evalue=1e-107,
Organism=Homo sapiens, GI256000749, Length=684, Percent_Identity=34.7953216374269, Blast_Score=370, Evalue=1e-102,
Organism=Homo sapiens, GI255982614, Length=683, Percent_Identity=34.6998535871157, Blast_Score=370, Evalue=1e-102,
Organism=Homo sapiens, GI20544129, Length=681, Percent_Identity=33.920704845815, Blast_Score=370, Evalue=1e-102,
Organism=Homo sapiens, GI38158022, Length=564, Percent_Identity=36.8794326241135, Blast_Score=349, Evalue=1e-95,
Organism=Homo sapiens, GI299829255, Length=628, Percent_Identity=34.0764331210191, Blast_Score=346, Evalue=1e-94,
Organism=Homo sapiens, GI20336302, Length=671, Percent_Identity=31.1475409836066, Blast_Score=334, Evalue=4e-91,
Organism=Homo sapiens, GI261878478, Length=674, Percent_Identity=32.0474777448071, Blast_Score=321, Evalue=4e-87,
Organism=Homo sapiens, GI20336294, Length=530, Percent_Identity=34.5283018867924, Blast_Score=279, Evalue=2e-74,
Organism=Homo sapiens, GI20336290, Length=530, Percent_Identity=34.5283018867924, Blast_Score=279, Evalue=2e-74,
Organism=Homo sapiens, GI167830433, Length=611, Percent_Identity=32.4058919803601, Blast_Score=278, Evalue=2e-74,
Organism=Homo sapiens, GI167830436, Length=608, Percent_Identity=32.0723684210526, Blast_Score=271, Evalue=2e-72,
Organism=Homo sapiens, GI39777586, Length=640, Percent_Identity=31.09375, Blast_Score=270, Evalue=6e-72,
Organism=Homo sapiens, GI100913206, Length=600, Percent_Identity=31.3333333333333, Blast_Score=246, Evalue=8e-65,
Organism=Homo sapiens, GI261878481, Length=578, Percent_Identity=30.2768166089965, Blast_Score=246, Evalue=1e-64,
Organism=Homo sapiens, GI166851804, Length=521, Percent_Identity=31.8618042226488, Blast_Score=212, Evalue=2e-54,
Organism=Homo sapiens, GI20336300, Length=667, Percent_Identity=25.7871064467766, Blast_Score=206, Evalue=1e-52,
Organism=Homo sapiens, GI67782362, Length=432, Percent_Identity=30.3240740740741, Blast_Score=171, Evalue=4e-42,
Organism=Homo sapiens, GI163914394, Length=506, Percent_Identity=30.6324110671937, Blast_Score=166, Evalue=1e-40,
Organism=Homo sapiens, GI29029601, Length=273, Percent_Identity=36.996336996337, Blast_Score=160, Evalue=8e-39,
Organism=Homo sapiens, GI269847874, Length=541, Percent_Identity=26.0628465804067, Blast_Score=154, Evalue=4e-37,
Organism=Escherichia coli, GI145693127, Length=1315, Percent_Identity=46.0836501901141, Blast_Score=1108, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=462, Percent_Identity=33.982683982684, Blast_Score=218, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17535281, Length=662, Percent_Identity=33.987915407855, Blast_Score=381, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI17554326, Length=659, Percent_Identity=35.9635811836115, Blast_Score=381, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI17556386, Length=738, Percent_Identity=34.4173441734417, Blast_Score=373, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI17531507, Length=667, Percent_Identity=34.3328335832084, Blast_Score=367, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI25144243, Length=669, Percent_Identity=32.2869955156951, Blast_Score=359, Evalue=6e-99,
Organism=Caenorhabditis elegans, GI32565154, Length=663, Percent_Identity=32.2775263951735, Blast_Score=353, Evalue=4e-97,
Organism=Caenorhabditis elegans, GI71990212, Length=682, Percent_Identity=30.058651026393, Blast_Score=302, Evalue=8e-82,
Organism=Caenorhabditis elegans, GI71996313, Length=490, Percent_Identity=34.8979591836735, Blast_Score=258, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI86562256, Length=706, Percent_Identity=28.4702549575071, Blast_Score=224, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=28.6103542234332, Blast_Score=152, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17552054, Length=275, Percent_Identity=33.0909090909091, Blast_Score=143, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6320850, Length=672, Percent_Identity=34.077380952381, Blast_Score=404, Evalue=1e-113,
Organism=Saccharomyces cerevisiae, GI6321318, Length=678, Percent_Identity=34.9557522123894, Blast_Score=397, Evalue=1e-111,
Organism=Saccharomyces cerevisiae, GI6322939, Length=674, Percent_Identity=35.0148367952522, Blast_Score=351, Evalue=5e-97,
Organism=Saccharomyces cerevisiae, GI6322772, Length=675, Percent_Identity=32.2962962962963, Blast_Score=319, Evalue=2e-87,
Organism=Saccharomyces cerevisiae, GI6324338, Length=674, Percent_Identity=30.7121661721068, Blast_Score=303, Evalue=1e-82,
Organism=Saccharomyces cerevisiae, GI6323451, Length=485, Percent_Identity=29.0721649484536, Blast_Score=202, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6323776, Length=212, Percent_Identity=42.9245283018868, Blast_Score=178, Evalue=4e-45,
Organism=Drosophila melanogaster, GI20129977, Length=653, Percent_Identity=36.7534456355283, Blast_Score=405, Evalue=1e-113,
Organism=Drosophila melanogaster, GI19921728, Length=662, Percent_Identity=33.987915407855, Blast_Score=390, Evalue=1e-108,
Organism=Drosophila melanogaster, GI18859729, Length=661, Percent_Identity=35.5521936459909, Blast_Score=376, Evalue=1e-104,
Organism=Drosophila melanogaster, GI19921526, Length=685, Percent_Identity=33.7226277372263, Blast_Score=367, Evalue=1e-101,
Organism=Drosophila melanogaster, GI19920696, Length=667, Percent_Identity=33.5832083958021, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI45550174, Length=663, Percent_Identity=32.1266968325792, Blast_Score=343, Evalue=5e-94,
Organism=Drosophila melanogaster, GI24643238, Length=568, Percent_Identity=32.3943661971831, Blast_Score=291, Evalue=3e-78,
Organism=Drosophila melanogaster, GI24585491, Length=605, Percent_Identity=30.9090909090909, Blast_Score=283, Evalue=5e-76,
Organism=Drosophila melanogaster, GI24585920, Length=502, Percent_Identity=34.2629482071713, Blast_Score=254, Evalue=4e-67,
Organism=Drosophila melanogaster, GI17136342, Length=502, Percent_Identity=34.2629482071713, Blast_Score=253, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24642763, Length=638, Percent_Identity=30.564263322884, Blast_Score=247, Evalue=4e-65,
Organism=Drosophila melanogaster, GI24641139, Length=632, Percent_Identity=31.3291139240506, Blast_Score=244, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24641942, Length=502, Percent_Identity=30.4780876494024, Blast_Score=229, Evalue=1e-59,
Organism=Drosophila melanogaster, GI17136508, Length=509, Percent_Identity=32.6129666011788, Blast_Score=207, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17136242, Length=319, Percent_Identity=33.2288401253918, Blast_Score=159, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 152541; Mature: 152409

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRTERRDAGPEAARAPHA
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCC
PRTRCAPNPVPPITFAESLPVSGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH
RGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCEEEEE
DGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDA
CCEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH
ERFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREA
HHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHH
ERDLMDGIVDAVDELCREGPGDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIEPISQ
HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
FPFIEPPPGRAIADGYQLLNELGAVDDENALTPLGRELARLPLDPRVGRMILAARDQQAL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH
REVLVIASALSVQDPRERPVDAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSN
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEADATFEQIHLSLLTGLLGNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER
CCCCCCCCCEECCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IGAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGAL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
VDGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFE
ECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
RWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELFPKRVTMAGVEMALAYHFEPG
HHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHEEEECCC
SPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF
CCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHEECHHHHEEEEEEHHCCHHHHH
GRNLAQLRAELGAQAQQHFQKIAAAATLAPAGEPAAAAAGASGARARRAPLGAPPRAAEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCC
AAQAGAAAGATALYEHLTTWNFGKLPELLEIRRRGETLFGYPALVDRGTHCDVEVFDSPD
HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCHHHHCCCCCCCEEEECCCH
EAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CLQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DMQGQLAALVGKRFVVDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQH
CHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRTERRDAGPEAARAPHA
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCC
PRTRCAPNPVPPITFAESLPVSGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH
RGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCEEEEE
DGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDA
CCEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH
ERFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREA
HHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHH
ERDLMDGIVDAVDELCREGPGDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIEPISQ
HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
FPFIEPPPGRAIADGYQLLNELGAVDDENALTPLGRELARLPLDPRVGRMILAARDQQAL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH
REVLVIASALSVQDPRERPVDAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSN
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEADATFEQIHLSLLTGLLGNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER
CCCCCCCCCEECCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IGAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGAL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
VDGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFE
ECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
RWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELFPKRVTMAGVEMALAYHFEPG
HHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHEEHEEEECCC
SPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF
CCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAM
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHEECHHHHEEEEEEHHCCHHHHH
GRNLAQLRAELGAQAQQHFQKIAAAATLAPAGEPAAAAAGASGARARRAPLGAPPRAAEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCC
AAQAGAAAGATALYEHLTTWNFGKLPELLEIRRRGETLFGYPALVDRGTHCDVEVFDSPD
HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCHHHHCCCCCCCEEEECCCH
EAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CLQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DMQGQLAALVGKRFVVDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQH
CHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]