| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451984
Identifier: 126451984
GI number: 126451984
Start: 3404981
End: 3405637
Strand: Direct
Name: 126451984
Synonym: BURPS1106A_3500
Alternate gene names: NA
Gene position: 3404981-3405637 (Clockwise)
Preceding gene: 126452033
Following gene: 126453410
Centisome position: 85.37
GC content: 64.38
Gene sequence:
>657_bases ATGTCTCGCAAAACCCTACTCGATCCGCGACGCGTACGTGACGAAATCGCGCTCGCGGCAGCACGCCTGATCGCCGAAGA CGGGCTCGATTACGCCGGCGCGAAGCGCAAGGCCGCGCGCCAAGTGCTTGGCGACAGCCGGATTGCCGGCGAATGGCTGC CGGATAACGACCAGATCGAAGAAGAACTGCACGAATACCTCGCGCTGTTCCAGAGCGACACGCAGCCCGCCGAACTGCGA CGGCTGCGCCTCGTCGCGCTCGCATGGATGGAGCGGCTCGCGGCGTTCAATCCGTACGTCGCGGGCGCGGTGCTGAACGG CACGGCGAACGCGCATTCCGACATCCATCTGCAGACCTTCTGCGACAACCATAAGGATGTCGCGATCTATCTGCTGAACC AGAACATTCAGTACGACGTCTCCGAAACCCGCCATTTCGCGGGGCGCGGCGACATCGAAACGCTCAGCTTCCTGTGGCGC GAAGCGCGCGGCGCGGAACCCGTCGGCATTCACGTCGCACTGTATACCAGCGACGACCTGCGCGGCGCCGTGAAAGCGGA CGCCCGCGGTCGTCTATCACGCGCCGACGCGCAAACGCTACGTGCGCTCGTCGACGCGGCGCCGTCCTCACCAACCGAAT CTCGAACCGATGAATAG
Upstream 100 bases:
>100_bases GCCGCGCAAAGAGGGCTATTGTAACTGACGCCCCCGGCACGAACGACGCTTGACGCAACCGCCGGGTCGCTCCGCACCGA TCTAGTATGATTGCCGGATC
Downstream 100 bases:
>100_bases CAAAGGCATTTTCGCCGGCATCGTGGTCGCGGCCGTCGCGGTCGCGGGCGGCCTCGCCGCCGGCCATTGGATGCGCGGCA ACCCGGCGAGCGGCCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRKTLLDPRRVRDEIALAAARLIAEDGLDYAGAKRKAARQVLGDSRIAGEWLPDNDQIEEELHEYLALFQSDTQPAELR RLRLVALAWMERLAAFNPYVAGAVLNGTANAHSDIHLQTFCDNHKDVAIYLLNQNIQYDVSETRHFAGRGDIETLSFLWR EARGAEPVGIHVALYTSDDLRGAVKADARGRLSRADAQTLRALVDAAPSSPTESRTDE
Sequences:
>Translated_218_residues MSRKTLLDPRRVRDEIALAAARLIAEDGLDYAGAKRKAARQVLGDSRIAGEWLPDNDQIEEELHEYLALFQSDTQPAELR RLRLVALAWMERLAAFNPYVAGAVLNGTANAHSDIHLQTFCDNHKDVAIYLLNQNIQYDVSETRHFAGRGDIETLSFLWR EARGAEPVGIHVALYTSDDLRGAVKADARGRLSRADAQTLRALVDAAPSSPTESRTDE >Mature_217_residues SRKTLLDPRRVRDEIALAAARLIAEDGLDYAGAKRKAARQVLGDSRIAGEWLPDNDQIEEELHEYLALFQSDTQPAELRR LRLVALAWMERLAAFNPYVAGAVLNGTANAHSDIHLQTFCDNHKDVAIYLLNQNIQYDVSETRHFAGRGDIETLSFLWRE ARGAEPVGIHVALYTSDDLRGAVKADARGRLSRADAQTLRALVDAAPSSPTESRTDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24234; Mature: 24103
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKTLLDPRRVRDEIALAAARLIAEDGLDYAGAKRKAARQVLGDSRIAGEWLPDNDQIE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH EELHEYLALFQSDTQPAELRRLRLVALAWMERLAAFNPYVAGAVLNGTANAHSDIHLQTF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCEEEEEE CDNHKDVAIYLLNQNIQYDVSETRHFAGRGDIETLSFLWREARGAEPVGIHVALYTSDDL CCCCCCEEEEEECCCCEECHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC RGAVKADARGRLSRADAQTLRALVDAAPSSPTESRTDE CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRKTLLDPRRVRDEIALAAARLIAEDGLDYAGAKRKAARQVLGDSRIAGEWLPDNDQIE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH EELHEYLALFQSDTQPAELRRLRLVALAWMERLAAFNPYVAGAVLNGTANAHSDIHLQTF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCEEEEEE CDNHKDVAIYLLNQNIQYDVSETRHFAGRGDIETLSFLWREARGAEPVGIHVALYTSDDL CCCCCCEEEEEECCCCEECHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC RGAVKADARGRLSRADAQTLRALVDAAPSSPTESRTDE CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA