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The map label for this gene is thiO [H]

Identifier: 126451980

GI number: 126451980

Start: 3648379

End: 3649512

Strand: Reverse

Name: thiO [H]

Synonym: BURPS1106A_3739

Alternate gene names: 126451980

Gene position: 3649512-3648379 (Counterclockwise)

Preceding gene: 126453556

Following gene: 126455368

Centisome position: 91.5

GC content: 73.63

Gene sequence:

>1134_bases
ATGAACATGCGTGCGTCTGAACCCGATTTCGCGGTGCTGGGCGGCGGCCTCGTCGGCCGCCTGATCGCGTGGCGCCTCGC
GGGCGCGGGATACCGCGTGTCGCTCTACGAGCGCGGCGACGCGGCGGGCTCGGGCTCGGCCGCATGGGTCGCGGCCGCGA
TGCTCGCGCCGCTCGCCGAAGCCGCGAGCGCCGAGCGCCTCATCACCGATCTCGGCGTCGCGTCGTTCGATCTGTGGCCG
AGCTGGCTTGCCGAGCTGCCGGAGCCCGTCTACTTCCAGCGCAACGGCACGCTTGTCGTCTGGCATCACGCGGACCGCGC
GGAAGCGCCGCTCTTCGAGCGCCGCGTGCGCGCGAACGCGAGCGCCGAGCTGCTCGACGGCGGCCTCATCGCGCTCGCGG
GCGCGCAGCTCGACGCGGCCGAGCCGGCGCTCGCCGGCCGCTTCGCGCGCGGCCTGCTGCTGCCGCGCGAAGGCCAGCTC
GACAATCGCCAGGCGCTGCGCGCGCTCGCCGCGGGCTTGGCCGAGCGCGGTGTCGACGTGCACTGGAATGCCGCCGTCGC
GCCCGATGCCGCGCCCGCCGCGCGCATCACGATCGACTGCCGCGGGCTCGGCGCGAAGGCGCAGATGCCGGCGCTGCGCG
GGATTCGCGGCGAAGTCGCGCGCGTGCACGCGCCCGGCATCGGCCTCACGCGCCCCGTGCGACTCTTGCATCCGCGCTAT
CCGCTGTACGTCGCGCCGAAGGAGAACGATCTCTACGTGATCGGCGCGACCGAGATCGAGGGCGAGGACATGTCGCCCGT
CAGCGTGCGCTCCGCGCTCGAATTGCTGAGCGCCGCGTTCTCCGTGCACCCGGCGTTCGGCGAGGCGCGTATTCTTGAAC
TGAACACGCAATGCCGGCCGACGCTGCCCGACCATCGTCCGGCGCTCGTGTGGGACGGCGGCGCGACGCTCGCGGTCAAC
GGCCTGTACCGGCACGGCTTCATGATCGCGCCGGAAATCGCCGATGCCGCGGCCCGTTTCGCGCAGGCGCTCGTCGAGCG
TACCGTGAAGGATGCCGATACGTTCGCCGCGTGGCGGCGCGACGCGCGCTGGCCGGCGCTGCTGCAGCAGCGCGCGGCGC
ACGCGTCCGCGTGA

Upstream 100 bases:

>100_bases
TCTTCAGTTCTTTTGCGTCGCTGCGAGCCGTCGGCCGCCGCGGCTTCCCCGGCTCCCGCAGCGAGCCGCTTCCCGATGAC
GGACATGACGGACGGATGCG

Downstream 100 bases:

>100_bases
GCGCCGGACGAGCCGGCCAATTCCGATCAATCGACATCGACAGCCATCATGGACATCCAGGTCAACCAACAGACGTTCTC
GCTGCCCGACGGCGCGACGG

Product: glycine oxidase ThiO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNMRASEPDFAVLGGGLVGRLIAWRLAGAGYRVSLYERGDAAGSGSAAWVAAAMLAPLAEAASAERLITDLGVASFDLWP
SWLAELPEPVYFQRNGTLVVWHHADRAEAPLFERRVRANASAELLDGGLIALAGAQLDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAERGVDVHWNAAVAPDAAPAARITIDCRGLGAKAQMPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYVAPKENDLYVIGATEIEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNTQCRPTLPDHRPALVWDGGATLAVN
GLYRHGFMIAPEIADAAARFAQALVERTVKDADTFAAWRRDARWPALLQQRAAHASA

Sequences:

>Translated_377_residues
MNMRASEPDFAVLGGGLVGRLIAWRLAGAGYRVSLYERGDAAGSGSAAWVAAAMLAPLAEAASAERLITDLGVASFDLWP
SWLAELPEPVYFQRNGTLVVWHHADRAEAPLFERRVRANASAELLDGGLIALAGAQLDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAERGVDVHWNAAVAPDAAPAARITIDCRGLGAKAQMPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYVAPKENDLYVIGATEIEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNTQCRPTLPDHRPALVWDGGATLAVN
GLYRHGFMIAPEIADAAARFAQALVERTVKDADTFAAWRRDARWPALLQQRAAHASA
>Mature_377_residues
MNMRASEPDFAVLGGGLVGRLIAWRLAGAGYRVSLYERGDAAGSGSAAWVAAAMLAPLAEAASAERLITDLGVASFDLWP
SWLAELPEPVYFQRNGTLVVWHHADRAEAPLFERRVRANASAELLDGGLIALAGAQLDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAERGVDVHWNAAVAPDAAPAARITIDCRGLGAKAQMPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYVAPKENDLYVIGATEIEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNTQCRPTLPDHRPALVWDGGATLAVN
GLYRHGFMIAPEIADAAARFAQALVERTVKDADTFAAWRRDARWPALLQQRAAHASA

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40270; Mature: 40270

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRASEPDFAVLGGGLVGRLIAWRLAGAGYRVSLYERGDAAGSGSAAWVAAAMLAPLAE
CCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AASAERLITDLGVASFDLWPSWLAELPEPVYFQRNGTLVVWHHADRAEAPLFERRVRANA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHCCC
SAELLDGGLIALAGAQLDAAEPALAGRFARGLLLPREGQLDNRQALRALAAGLAERGVDV
CHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
HWNAAVAPDAAPAARITIDCRGLGAKAQMPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
EECCEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHCCCC
PLYVAPKENDLYVIGATEIEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNTQCRP
CEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
TLPDHRPALVWDGGATLAVNGLYRHGFMIAPEIADAAARFAQALVERTVKDADTFAAWRR
CCCCCCCEEEECCCCEEEEECHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARWPALLQQRAAHASA
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNMRASEPDFAVLGGGLVGRLIAWRLAGAGYRVSLYERGDAAGSGSAAWVAAAMLAPLAE
CCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AASAERLITDLGVASFDLWPSWLAELPEPVYFQRNGTLVVWHHADRAEAPLFERRVRANA
HHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHCCC
SAELLDGGLIALAGAQLDAAEPALAGRFARGLLLPREGQLDNRQALRALAAGLAERGVDV
CHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
HWNAAVAPDAAPAARITIDCRGLGAKAQMPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
EECCEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHCCCC
PLYVAPKENDLYVIGATEIEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNTQCRP
CEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
TLPDHRPALVWDGGATLAVNGLYRHGFMIAPEIADAAARFAQALVERTVKDADTFAAWRR
CCCCCCCEEEECCCCEEEEECHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARWPALLQQRAAHASA
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]