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The map label for this gene is bioC [C]

Identifier: 126451950

GI number: 126451950

Start: 3012340

End: 3013098

Strand: Reverse

Name: bioC [C]

Synonym: BURPS1106A_3087

Alternate gene names: 126451950

Gene position: 3013098-3012340 (Counterclockwise)

Preceding gene: 126455092

Following gene: 126453489

Centisome position: 75.55

GC content: 68.12

Gene sequence:

>759_bases
ATGCCAACATTTCACCGATCACGAATCACGATGACCCAAAACATTTACGACGATCCCGACTTCTTCGAAGGTTACGGCCA
GTTGCCGCGCTCGCGCGACGGTCTCGACGGCGCGCCCGAATGGCCGTCGCTGCGTGCGATGCTGCCGAACGTCGCGGGCC
GCCGCGTCGTCGATCTCGGCTGCGGCTACGGCTGGTTCTGCCGCTGGGCGGCGGAGCAGGGCGCGGCGCGCGTGCTCGGT
ATCGACGTGTCGGCGCGCATGCTCGACAGGGCGCGCGAGATGACGACATCGCCGGCCGTCCGATACGAGCGCGCGGACCT
CGAGCGCCTGTCGCTGCCTAGCGCGAGCTTCGAGCTCGCGTACAGCTCGCTCGCGTTTCACTATGTCGAGCACCTGCCCG
CGCTGTTCGGCGCGATCGGCCGCGCGCTCGTGCCGGACGGCCGCCTGGTGTTCTCGATCGAGCATCCGATCTACATGGCG
TCGCGCCGGCCGCAATGGCGCATCGACGAGAACGGACACAGGTTCTGGCCCGTCGACGGCTATCGGATCGAAGGCCGCCG
CACGACCGACTGGTTTGCCGCGGGTGTCGTCAAGTATCACCGCACGCTCGGCACGCTGTTGAATCAGTTGATCGCTGCGG
GTTTCCGGATCGACCATCTCGACGAGTGGGGGCCGTCGGACGAGCAGGTCGCCGCGCAGCCGGCGCTCGCGCAGGAGCGG
GAGCGCCCGATGTTCGCGCTCGTCGGTGCGCGGCGTTGA

Upstream 100 bases:

>100_bases
TCTCCAATACCGAATCCGAATCCGAATCCGCGCCCCCGCCCGCGCCCGCATCCAAGCGTACACGTACGCCGAACGTCCGC
CGTGCCGGCGCCGATCACTC

Downstream 100 bases:

>100_bases
GCGGGGTGATCGGCGCGATGGCCGGCACGATCGGGATGGCGGAGATTGACCGAGCCGGCCGAGGAACACGTGGCGGCGTG
TGCGGTTCCCGACGAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPTFHRSRITMTQNIYDDPDFFEGYGQLPRSRDGLDGAPEWPSLRAMLPNVAGRRVVDLGCGYGWFCRWAAEQGAARVLG
IDVSARMLDRAREMTTSPAVRYERADLERLSLPSASFELAYSSLAFHYVEHLPALFGAIGRALVPDGRLVFSIEHPIYMA
SRRPQWRIDENGHRFWPVDGYRIEGRRTTDWFAAGVVKYHRTLGTLLNQLIAAGFRIDHLDEWGPSDEQVAAQPALAQER
ERPMFALVGARR

Sequences:

>Translated_252_residues
MPTFHRSRITMTQNIYDDPDFFEGYGQLPRSRDGLDGAPEWPSLRAMLPNVAGRRVVDLGCGYGWFCRWAAEQGAARVLG
IDVSARMLDRAREMTTSPAVRYERADLERLSLPSASFELAYSSLAFHYVEHLPALFGAIGRALVPDGRLVFSIEHPIYMA
SRRPQWRIDENGHRFWPVDGYRIEGRRTTDWFAAGVVKYHRTLGTLLNQLIAAGFRIDHLDEWGPSDEQVAAQPALAQER
ERPMFALVGARR
>Mature_251_residues
PTFHRSRITMTQNIYDDPDFFEGYGQLPRSRDGLDGAPEWPSLRAMLPNVAGRRVVDLGCGYGWFCRWAAEQGAARVLGI
DVSARMLDRAREMTTSPAVRYERADLERLSLPSASFELAYSSLAFHYVEHLPALFGAIGRALVPDGRLVFSIEHPIYMAS
RRPQWRIDENGHRFWPVDGYRIEGRRTTDWFAAGVVKYHRTLGTLLNQLIAAGFRIDHLDEWGPSDEQVAAQPALAQERE
RPMFALVGARR

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786994, Length=140, Percent_Identity=34.2857142857143, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28621; Mature: 28490

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFHRSRITMTQNIYDDPDFFEGYGQLPRSRDGLDGAPEWPSLRAMLPNVAGRRVVDLG
CCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
CGYGWFCRWAAEQGAARVLGIDVSARMLDRAREMTTSPAVRYERADLERLSLPSASFELA
CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
YSSLAFHYVEHLPALFGAIGRALVPDGRLVFSIEHPIYMASRRPQWRIDENGHRFWPVDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEECCCCCEEECCCC
YRIEGRRTTDWFAAGVVKYHRTLGTLLNQLIAAGFRIDHLDEWGPSDEQVAAQPALAQER
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHH
ERPMFALVGARR
CCCEEEECCCCC
>Mature Secondary Structure 
PTFHRSRITMTQNIYDDPDFFEGYGQLPRSRDGLDGAPEWPSLRAMLPNVAGRRVVDLG
CCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEC
CGYGWFCRWAAEQGAARVLGIDVSARMLDRAREMTTSPAVRYERADLERLSLPSASFELA
CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
YSSLAFHYVEHLPALFGAIGRALVPDGRLVFSIEHPIYMASRRPQWRIDENGHRFWPVDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEECCCCCEEECCCC
YRIEGRRTTDWFAAGVVKYHRTLGTLLNQLIAAGFRIDHLDEWGPSDEQVAAQPALAQER
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHH
ERPMFALVGARR
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]