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The map label for this gene is yafJ [C]

Identifier: 126451948

GI number: 126451948

Start: 3334813

End: 3335727

Strand: Direct

Name: yafJ [C]

Synonym: BURPS1106A_3419

Alternate gene names: 126451948

Gene position: 3334813-3335727 (Clockwise)

Preceding gene: 126455251

Following gene: 126453066

Centisome position: 83.61

GC content: 65.79

Gene sequence:

>915_bases
ATGTGCCAACTCTTCGGAATGAACTGCGCCGAACCGACGGACGTGACGTTCTCGTTTACCGGCTTCGCGGCCCGCGGCGG
GCTCACCGATCATCATGCCGACGGCTGGGGCATCGCGTTCTTCGAGGACAAGGCCTGTCGCCTCTTCATCGACCAGCAGT
CGTCGTCGACGTCGCCCATCGCCGAGATGGTCAAGCGCTACCCGATCAAGTCGAAGAACACGATCGCGCACATCCGCAAG
GCGACGCAGGGGCATATCCTGCTCGAGAACTGCCATCCGTTCATGCGCGAGCTGTGGGGCCGCCACTGGATCTTCGCGCA
CAACGGCGATCTGCAGAGCTACGTGCCCGACCTCGAAGGCGGCGTCTATCAGCCGGTCGGCACGACCGACAGCGAGAAAG
CGTTCTGCAAGCTGATGCAGGGCCTGCGCGAAGCGTTTCCGAGCGCGCAGCCGCCGCTGCCCGAACTGTTCGAGCAGATC
GGCGAGCTCACGCGCGACATCACGCGTCACGGCGTATTCAATTTCCTGATGTCGAACGGGCAGGCGCTGTTCGCGCACTG
CTCGACGCGCCTGCACTACCTCGTGCGGCGCTGGCCGTTCTCGACCGCGCATCTGATCGACGAAGACATCTCGATCGATT
TCGCGAAATACACGACGCCTGAGGATCGTGTCGCGGTGATCGCAACGCAGCCGCTCACCGACGACGAAGTGTGGACCGCG
CTCGAGCCGGGCGAACTCGTGATGTTCCAGTGCGGCGACGTCGCGGCAACGATGCGCATCCCGGTGCCGGAGGCCGTGCT
CGAGAAGCTGCGCAACCCGGCGCTCGACGCCTCCGCGTCGGCGCCGCGCCGGTCGCCCGCGCTCGCGGCGAGCGGCGCGG
GCGACGATCTCGGCGACGATCCGGTCGACTTCTGA

Upstream 100 bases:

>100_bases
TCGCCTTTTGCCGCTTAGGGCTCGGTGATATGCTTGAAGCCGACATTGTACCGGTTCCCGTCCGGTGTACTCCCCCGCCA
GCCTCAGCCGCACCCGCGAT

Downstream 100 bases:

>100_bases
TCCGGATGGGCCGCGTTCGCCGCGTGCTTTTCGAAAAGCCCGGCGTGGCGCGCGCCGTGAACCGAATCGTTTCCCACGCC
GGCGCGCGAAACGAGCATCC

Product: class-II glutamine amidotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSSTSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENCHPFMRELWGRHWIFAHNGDLQSYVPDLEGGVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELFEQI
GELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKYTTPEDRVAVIATQPLTDDEVWTA
LEPGELVMFQCGDVAATMRIPVPEAVLEKLRNPALDASASAPRRSPALAASGAGDDLGDDPVDF

Sequences:

>Translated_304_residues
MCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSSTSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENCHPFMRELWGRHWIFAHNGDLQSYVPDLEGGVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELFEQI
GELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKYTTPEDRVAVIATQPLTDDEVWTA
LEPGELVMFQCGDVAATMRIPVPEAVLEKLRNPALDASASAPRRSPALAASGAGDDLGDDPVDF
>Mature_304_residues
MCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSSTSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENCHPFMRELWGRHWIFAHNGDLQSYVPDLEGGVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELFEQI
GELTRDITRHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKYTTPEDRVAVIATQPLTDDEVWTA
LEPGELVMFQCGDVAATMRIPVPEAVLEKLRNPALDASASAPRRSPALAASGAGDDLGDDPVDF

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=253, Percent_Identity=51.7786561264822, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 33714; Mature: 33714

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSSTSPI
CCEEECCCCCCCCCCEEEECCCHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHH
AEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRELWGRHWIFAHNGDLQSYVPDLEG
HHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEECCCHHHHCCCCCC
GVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELFEQIGELTRDITRHGVFNFLMSNG
CEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKYTTPEDRVAVIATQPLTDDEVWTA
CEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCCCCCCCCEEEEEECCCCCCHHEEE
LEPGELVMFQCGDVAATMRIPVPEAVLEKLRNPALDASASAPRRSPALAASGAGDDLGDD
CCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
PVDF
CCCC
>Mature Secondary Structure
MCQLFGMNCAEPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDQQSSSTSPI
CCEEECCCCCCCCCCEEEECCCHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHH
AEMVKRYPIKSKNTIAHIRKATQGHILLENCHPFMRELWGRHWIFAHNGDLQSYVPDLEG
HHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEECCCHHHHCCCCCC
GVYQPVGTTDSEKAFCKLMQGLREAFPSAQPPLPELFEQIGELTRDITRHGVFNFLMSNG
CEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QALFAHCSTRLHYLVRRWPFSTAHLIDEDISIDFAKYTTPEDRVAVIATQPLTDDEVWTA
CEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCCCCCCCCEEEEEECCCCCCHHEEE
LEPGELVMFQCGDVAATMRIPVPEAVLEKLRNPALDASASAPRRSPALAASGAGDDLGDD
CCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
PVDF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]