| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451934
Identifier: 126451934
GI number: 126451934
Start: 2260163
End: 2260534
Strand: Direct
Name: 126451934
Synonym: BURPS1106A_2274
Alternate gene names: NA
Gene position: 2260163-2260534 (Clockwise)
Preceding gene: 126454536
Following gene: 126452183
Centisome position: 56.67
GC content: 63.71
Gene sequence:
>372_bases ATGAACCCCGCTTCCCTCTTTTGCATCGTCACGGGCGTGATGCTGAACGCCTGCGCGCAACTGCTGCTGAAAGCCGGCGT GCGCGCCGTTGGACACTTCGAATTCACCCGTGCGAACATTGTGCCCATCGGCTTCAAGATCGCGACCCAATTGCCGATCA TCGGCGGCCTCGGCTGCTACGTGCTCTCGGTGGTCGTGTGGATCGTCGGGCTGTCGCGGGTCGACGTGTCGGTCGCGTAT CCGATGCTCTCGCTCGGCTACGTCGTCAACGCGTTCGCCGCGTGGTACCTGTTCGGCGAGGTGCTGTCGGTGCAACGCCT CGTCGGCATCGGCATCATCCTGATCGGCGTGTTCGTGCTCGCGCGCAGCTGA
Upstream 100 bases:
>100_bases AGTTGTCGGAGGCCGGCCTGCCGATGCGCGTCGTCGCACGCGACAACCGGCGCGTCGTCGTCGAGAAGCCGCAATCCTGA GCCGCGAAGGACCCGAATCG
Downstream 100 bases:
>100_bases CGCCCGCGCCCGGCCGACGCGCCGGCCGGACCGACAAAAAGTGACGTACCCGTTCCGGCGAACAGTGTTAAATGCGCGTG TCGGGCGGCGCCCGATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNPASLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS
Sequences:
>Translated_123_residues MNPASLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS >Mature_123_residues MNPASLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSVAY PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVLARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13099; Mature: 13099
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPASLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEHHCCEEEECHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSVAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC >Mature Secondary Structure MNPASLFCIVTGVMLNACAQLLLKAGVRAVGHFEFTRANIVPIGFKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEHHCCEEEECHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSVAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA