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The map label for this gene is yedA [H]

Identifier: 126451929

GI number: 126451929

Start: 1382441

End: 1383376

Strand: Direct

Name: yedA [H]

Synonym: BURPS1106A_1407

Alternate gene names: 126451929

Gene position: 1382441-1383376 (Clockwise)

Preceding gene: 126452620

Following gene: 126455105

Centisome position: 34.66

GC content: 71.58

Gene sequence:

>936_bases
ATGACGCCGTTCGACCGTTTTCTCGCCTTCGTCGCGCGTCATCCGCCCCGCCTGCCGCAGAGCCGCAGCGGCCGCGTCGC
GCTCGCGCTCGTGTTCATCTATTTCGCGTGGGGCTCGACGTACCTCGCGCTGCACGTCGCGCTCGAATCGTTTCCGCCGC
TGCTGCTCTCCGGGCTGCGCAATCTGCTCGCGGGCGTCGGGCTCTTCGTCTTCGCGATGCGGCGCCGGCCGGTGCGGCCA
ACGCTCGTCGAAATCCGCAACGCGGCGCTCGTCGGCACGATGCTCGTCACGATGTCCTCCGGCCTCATCGCGCTCGGCAT
GCGCACCGTCAGCAGCGGCTCGGCCGCGGTGATGGTCGCGACGGTGCCGCTCTTCGCGACGGTGATCGCGTCGGTGGCCG
GGCGGCGCGTCACGGGCGGCGAATGGGGGGCCGTCGCGCTCGGCATGGTCGGGATCGTCGTGCTGAACTCGGGCGGGCCG
TCGTCGCCGGGCTCGACGCTCGGCAGCATCACCGTGCTCGCGGGCGCGCTCTTCTGGGCGGGCGGCGCGCATCTCGCCGC
GCGGCTCGCGCTGCCGCACGATCTGTTCCTGTCGACCGCGCTGCAGATCGGCCTGGGCGGCGCCGCGTCCACCTGCATCG
CCTGGGTGCTCGGCGAGCGCATCGGGCACGTCGCGTGGGTGCCCGGCGCCGCGTTCGTCTACCTGATGCTCGCCGGCACG
ATGGCCGCGTACGTCGCGTACGGCTATCTGATTCGCCACACGAGCCCGATCATCGCGAGCAGTTGCATGTACGTGAACCC
GGTCGTCGCGGTCGCGCTCGGCGCGCTGTTGCTCGGCGAGCCCGTTACGGCCGCGACCGTGATCGCGACGATCGCGATTC
TCGGCAGCGTCGGCTTGTCGTTCGTGTTCGATCCGGCGCGCCGGCGCGCGCAATAG

Upstream 100 bases:

>100_bases
GCCGCCGTCTCCCGTCATTCCGGTTTTCCCGGCGCCGCTCGCCGGCGGTCGCATCGCACGGCGTTCGACCGCGCGGCGCT
TCACGCGGGCGGGCTGACCG

Downstream 100 bases:

>100_bases
CGGCGGCGCGCGCGACGAAATCGCGCGGGAGGCGGGGGAGGCGCGGCGCGACATGAACGATGGCCGCGCGCGGTCGGCGG
CCGCATTGAACGCGCGCCGC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLRNLLAGVGLFVFAMRRRPVRP
TLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVATVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGP
SSPGSTLGSITVLAGALFWAGGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGT
MAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLSFVFDPARRRAQ

Sequences:

>Translated_311_residues
MTPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLRNLLAGVGLFVFAMRRRPVRP
TLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVATVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGP
SSPGSTLGSITVLAGALFWAGGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGT
MAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLSFVFDPARRRAQ
>Mature_310_residues
TPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLRNLLAGVGLFVFAMRRRPVRPT
LVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVATVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGPS
SPGSTLGSITVLAGALFWAGGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGTM
AAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLSFVFDPARRRAQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=263, Percent_Identity=37.2623574144487, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32194; Mature: 32062

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLR
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NLLAGVGLFVFAMRRRPVRPTLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHH
TVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGPSSPGSTLGSITVLAGALFWA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHC
GGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGT
CHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHH
MAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLS
HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FVFDPARRRAQ
HEECHHHHCCC
>Mature Secondary Structure 
TPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLR
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NLLAGVGLFVFAMRRRPVRPTLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEHH
TVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGPSSPGSTLGSITVLAGALFWA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHC
GGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGT
CHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHH
MAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLS
HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FVFDPARRRAQ
HEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]