| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451896
Identifier: 126451896
GI number: 126451896
Start: 1560574
End: 1562883
Strand: Direct
Name: 126451896
Synonym: BURPS1106A_1609
Alternate gene names: NA
Gene position: 1560574-1562883 (Clockwise)
Preceding gene: 126452772
Following gene: 126451485
Centisome position: 39.13
GC content: 57.79
Gene sequence:
>2310_bases ATGGCTTGTTGTAAGACATTGCATATCGGAATCTTCTTTGATGGTACGCGTAACAACGCTGATCGGGATAGGGGGGCGCG AACGGAAAGCAATGTGGCACGGCTTTATGCCGCTTTTCCAATAGATAAATATCACCAAGCGATTTACGTTGCTGGAGTTG GCACGCCTTTTGTCGAGCAGATTGGTGATTTCGGTGTTGGCTTACAGGCGGCCGCAGGAGCTGCGGCAGGTTGGGCGGGA GAGGGGCGAATTAACTGGGCTTTGCTTCGGATTCACGATATTTTGCATGCGTATGTTCACGGTCAGACGTTAACGGCAGT GTTAGGAAAGCGCTACGAGGAACTCGTAAAATCGATGAGCCTCGATATGAATTTTAAGGGCATCGACCTTGGCGGAACGC CGCCTAAACCGGGAAGCTTCGGCGATATCAAATTGCGTGCCAATTCTGGTGTGGGGGCGCTCAAGCTGATTGCTGCCGAA CAGAATGGTGTCGAGCTGACTTGGGATTTAGATACGAATTGGGCGCAGCTCAAAAACGAGTTGGATTCGTCGAAGTGGAA TGCAGCCGTGCAAGAATGGGACGCCAAGCGCCGTAAGGTATTGCTCGATCGTCGTGCTCAGCTAAAAGCGCGCATCGGTG ATCTGCTGGTCAAGGGGAAGCCGAAGCTGCAACGCATTCGGCTATACGTATTCGGCTTTTCGCGCGGTGCAGCGGAGGCT CGCACTTTCTCGAACTGGCTTGCTGACGCGCTTGACCCCGATTTCAGTTTGTGTGGAGTGCCGGTTTCATACGATTTTCT CGGTATCTTTGATACGGTCGCATCGGTCGGCATCGCTCAGAGCGCCGCCGCAACATTATTCGACGGACATGGAGGATGGG GGCGCAAGGAACTGATGGCCGTGCCGCATTATGTGCGCCGTTGCGTGCACATGGTGGCGGCACATGAACCTCGTGGATCA TTTCCGCTCGACCTTATCGATTGTTCGATGGACGGTCGTGAGGAGATTGTCTACCCGGGTGTTCACTCGGACGTCGGCGG CGGCTATGGGCCGGGCGAACAGGGGCGCGGTCGGGACGACGCCGACAAACTTTCGCAAGTCCCGCTGCTTGATATGTACC GGGAGGCGCGTAAGGCAGGTGTGCCCTTGGATATCAATGGGCCAGGTATCGGCGCGGACGTCATCGCTGCATTCAAGGTT TCAGCAGGGCTAAAACAAGCCTTCGCAGCCTACGTAAAAAAGAGCGAGAACTATTATTACGAGAAAGATCACGGCACGCC GGGCCTAATGCGTTGCCATTACGGCTTGTATCTCCGGTGGCGCAAGATGCGGCTCAAGGACATGCATGCACAGCCCAGCT TCAAGGCTGCGCAGGCGCGCTATCCGCAAGATGCAGCGGATCTGGACAGTGCGAACGCGGAATTGAAGGAGGAGTGGAAC GATTTGCTGGAGGTCGAGAAAGCTGGCGGCCCGACAATCACCCGATACGTGGAGAAGTTTGTTACGAAATGGGCCAGTGA GAATCCGAAAACGGCCGCCGTCGTTTCCACGTCTCTACTTCCGGCCGCGGTCGCTGCTGAGGTTTTTGTTCCGGGGGTTA GCGCTGCGACGGTTCTATTCGGCGACAAAGTGGTGAAACTGGTGCAAGCCCAACTCAAGGAGAAGTGGGAGCAGTGGCTG CAAGTTCGCAGCGACTGGAACATGGGGCCGCCTGAACCTGCGATCAGCGCACTCTACGACAACTACATGCACGACTCCCG CGCATGGTTCAAGCCGCTCGGCGACGATGACGACGTGTGGAACCATAGGCAGATTCAGGAACTCAAGACCAAGCAAGCCA GCTTTGAACGCGCCCATGCTGCCTGGAAAAAGCGTGTCGAAATGGGCATGCCAAGCTTGTTGCAGGTTACACAGGCAATG GGCGTAGGTTCCACAGGATGGGGGCCCGTCGGCGGGCTTCCGCCCGAACCCGAACCCCGCTCCCCGCTCACCGCCCAGCA AGCCGATCTGCTCAAGCGCTACGACGCCGCGATGCAGTCCGCCAAGCAGGCACGCGCCGCAAAGGACCCGAACGCGCCGA CGGACAGCGCCGTGCTGACCGATCCGAAGGTGACGGGCGGCCTCGCGCTGCAAACCAGCGGCCGCGAGTTCTATTTCCTG TGGGGCTTCCTGCGCTGGCGGACCGTGTTCGTGAACGGCGTGCGCTGGGACCAGCCGCGCGTGCCGACGGTGCAGGAGGA AATGGAGGGCATGCGCATGCAGATGCAACGCCAGGTCGACATGAAGGGCATCGGCGTACTGTTCCAATGA
Upstream 100 bases:
>100_bases CATGAGTTATCGTTTCGCATCCGCCGACCGATTTGATGTTAATGTCGTTACGAAAGACGAGCAGGACGCTATTTTGCGGA GGCTGCATGAAGATGACGGC
Downstream 100 bases:
>100_bases GCGAGCACGCAAGCGTGGCCGGCGATCGCGCACCGGCCGAAGCCCGCGCAATGACGCGCATCGAACGCGATCGCCGAGCG CGAGCGCACACGGGTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAG EGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRANSGVGALKLIAAE QNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQLKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEA RTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGS FPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDINGPGIGADVIAAFKV SAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKDMHAQPSFKAAQARYPQDAADLDSANAELKEEWN DLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWL QVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVEMGMPSLLQVTQAM GVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAAKDPNAPTDSAVLTDPKVTGGLALQTSGREFYFL WGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLFQ
Sequences:
>Translated_769_residues MACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAG EGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRANSGVGALKLIAAE QNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQLKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEA RTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGS FPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDINGPGIGADVIAAFKV SAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKDMHAQPSFKAAQARYPQDAADLDSANAELKEEWN DLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWL QVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVEMGMPSLLQVTQAM GVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAAKDPNAPTDSAVLTDPKVTGGLALQTSGREFYFL WGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLFQ >Mature_768_residues ACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGE GRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQ NGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQLKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEAR TFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSF PLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDINGPGIGADVIAAFKVS AGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKDMHAQPSFKAAQARYPQDAADLDSANAELKEEWND LLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQ VRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVEMGMPSLLQVTQAMG VGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAAKDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLW GFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84913; Mature: 84781
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQ CCCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHH IGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMS HHCCCCCHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC LDMNFKGIDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNE CCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHH LDSSKWNAAVQEWDAKRRKVLLDRRAQLKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHH RTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFDGHGGWGRKELMA HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHH VPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDD HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ADKLSQVPLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYY HHHHHCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE EKDHGTPGLMRCHYGLYLRWRKMRLKDMHAQPSFKAAQARYPQDAADLDSANAELKEEWN ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHH DLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLF HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHH GDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC NHRQIQELKTKQASFERAHAAWKKRVEMGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SPLTAQQADLLKRYDAAMQSAKQARAAKDPNAPTDSAVLTDPKVTGGLALQTSGREFYFL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCEEEEH WGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure ACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQ CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHH IGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMS HHCCCCCHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC LDMNFKGIDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNE CCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHH LDSSKWNAAVQEWDAKRRKVLLDRRAQLKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHH RTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFDGHGGWGRKELMA HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHH VPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDD HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ADKLSQVPLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYY HHHHHCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE EKDHGTPGLMRCHYGLYLRWRKMRLKDMHAQPSFKAAQARYPQDAADLDSANAELKEEWN ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHH DLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLF HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHH GDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC NHRQIQELKTKQASFERAHAAWKKRVEMGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SPLTAQQADLLKRYDAAMQSAKQARAAKDPNAPTDSAVLTDPKVTGGLALQTSGREFYFL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEEECCCEEEEH WGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA