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The map label for this gene is amaB [H]

Identifier: 126451874

GI number: 126451874

Start: 2020858

End: 2022138

Strand: Reverse

Name: amaB [H]

Synonym: BURPS1106A_2039

Alternate gene names: 126451874

Gene position: 2022138-2020858 (Counterclockwise)

Preceding gene: 126453113

Following gene: 126454953

Centisome position: 50.7

GC content: 69.16

Gene sequence:

>1281_bases
ATGAATCCGACGGTCTTTCCGCCCCTGAATGCCGAGCGCCTGAATGCGCGCGTCGAGCAACTCGCGCGTTTCACGCGAGC
CGACGTTCCGTGGACGCGCCGCGCGTTCTCGCCGCTGTTTACGGAAGCGCGCGCCTGGCTCGCCGCGCAGTTCGCCGCAG
CCGGGCTCGCGGTATCGATGGACGCCGCCGGCAACCTGATCGGCCGCCGCGAGGGCAGCGGCCGCTGCACGAAGCCGTTG
ATTACGGGCTCGCACTGCGACACGGTCGTCGGCGGCGGGCGCTTCGATGGGATCATCGGCGTGCTCGCCGGCATCGAGGT
CGCGCATACGCTGAACGAGCAGGGGATCGTGCTCGACCATCCGCTCGAAGTGATCGACTTCCTGTCCGAGGAGCCGAGCG
ACTACGGCATCTCGTGCGTCGGCAGCCGCGCGCTGTCGGGCGTGCTCGATGCGGGCATGCTACGCGCGACGAACGGGGAA
GGCGAAACGCTCGCGCAGGCGCTGACGCGCATCGGTGGCAAGCCGGAGGCGCTGAACATGCCGTTGCGCGCGCCAGGCAG
CACGGCTGCATTCGTCGAACTGCATATCGAGCAGGGCCCGGTGCTGGAAGCGCGCGGCCTGCCGATCGGCGTCGTGACCA
ATATCGTCGGCATCCGGCGCGTGCTGATCACCGTGATCGGGCAGCCCGACCATGCGGGGACGACGCCGATGGACATTCGT
CGAGACGCGCTTGTCGGTGCCGCACACCTGATTGAGGCCGCGCATGCGCGCGCGTTGTCGCTGTCGGGAAATCCACACTA
CGTGGTCGCGACGATCGGGCGGATCGCGATGACGCCGAACGTGCCGAACGCGGTGCCGGGGCAGGTCGAGCTCATGCTGG
AAGTGCGGAGCGACAGCGACGCGGTGCTCGACGCGTTTCCCGAGACGCTGCTGGCCGGTGCGGCCGCGCAGCTCGACGCG
TTGCGGTTGAGCGCGCACGCGGAGCATGTGAGCCGCGCGCGGCCGACCGACTGCCAGCCGCTCGTAATGGACGCGGTCGA
GCAGGCGGCAGCCCAGCTCGGCTACCCGAGCATGCGTTTGCCGAGCGGCGCGGGGCACGATGCCGTGTATGTCGCGCCGA
CCGGGCCGATCGGGATGATCTTCATTCCGTGCCTGGGTGGGCGCAGCCATTGCTCGGAGGAATGGATCGAGCCGCAGCAG
TTGCTCGACGGCACGCGCGTGCTGTACCGGACGCTCGTCGTGCTCGATCGCACGCTGGCAGCGCATGAAACCGGCCGCTG
A

Upstream 100 bases:

>100_bases
CGCTCGTGTACGACGGCGCACGCATCGTCAATCCGGCGGGCTCGGGCCGCTTCCTGAAGCCGCATGGCAGCCGGCCGATC
GTCACGCAACCGGAGCGCGC

Downstream 100 bases:

>100_bases
TCCGCGAGGTTGACCGACAGGAGTGCGATGCCGTGCGTCGCTTCGGCTCACGTCAGTCGGCGGCGCCGGTCTCGACGACG
AGACCGGCCGCTTTCCATTC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNPTVFPPLNAERLNARVEQLARFTRADVPWTRRAFSPLFTEARAWLAAQFAAAGLAVSMDAAGNLIGRREGSGRCTKPL
ITGSHCDTVVGGGRFDGIIGVLAGIEVAHTLNEQGIVLDHPLEVIDFLSEEPSDYGISCVGSRALSGVLDAGMLRATNGE
GETLAQALTRIGGKPEALNMPLRAPGSTAAFVELHIEQGPVLEARGLPIGVVTNIVGIRRVLITVIGQPDHAGTTPMDIR
RDALVGAAHLIEAAHARALSLSGNPHYVVATIGRIAMTPNVPNAVPGQVELMLEVRSDSDAVLDAFPETLLAGAAAQLDA
LRLSAHAEHVSRARPTDCQPLVMDAVEQAAAQLGYPSMRLPSGAGHDAVYVAPTGPIGMIFIPCLGGRSHCSEEWIEPQQ
LLDGTRVLYRTLVVLDRTLAAHETGR

Sequences:

>Translated_426_residues
MNPTVFPPLNAERLNARVEQLARFTRADVPWTRRAFSPLFTEARAWLAAQFAAAGLAVSMDAAGNLIGRREGSGRCTKPL
ITGSHCDTVVGGGRFDGIIGVLAGIEVAHTLNEQGIVLDHPLEVIDFLSEEPSDYGISCVGSRALSGVLDAGMLRATNGE
GETLAQALTRIGGKPEALNMPLRAPGSTAAFVELHIEQGPVLEARGLPIGVVTNIVGIRRVLITVIGQPDHAGTTPMDIR
RDALVGAAHLIEAAHARALSLSGNPHYVVATIGRIAMTPNVPNAVPGQVELMLEVRSDSDAVLDAFPETLLAGAAAQLDA
LRLSAHAEHVSRARPTDCQPLVMDAVEQAAAQLGYPSMRLPSGAGHDAVYVAPTGPIGMIFIPCLGGRSHCSEEWIEPQQ
LLDGTRVLYRTLVVLDRTLAAHETGR
>Mature_426_residues
MNPTVFPPLNAERLNARVEQLARFTRADVPWTRRAFSPLFTEARAWLAAQFAAAGLAVSMDAAGNLIGRREGSGRCTKPL
ITGSHCDTVVGGGRFDGIIGVLAGIEVAHTLNEQGIVLDHPLEVIDFLSEEPSDYGISCVGSRALSGVLDAGMLRATNGE
GETLAQALTRIGGKPEALNMPLRAPGSTAAFVELHIEQGPVLEARGLPIGVVTNIVGIRRVLITVIGQPDHAGTTPMDIR
RDALVGAAHLIEAAHARALSLSGNPHYVVATIGRIAMTPNVPNAVPGQVELMLEVRSDSDAVLDAFPETLLAGAAAQLDA
LRLSAHAEHVSRARPTDCQPLVMDAVEQAAAQLGYPSMRLPSGAGHDAVYVAPTGPIGMIFIPCLGGRSHCSEEWIEPQQ
LLDGTRVLYRTLVVLDRTLAAHETGR

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=387, Percent_Identity=33.5917312661499, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44997; Mature: 44997

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTVFPPLNAERLNARVEQLARFTRADVPWTRRAFSPLFTEARAWLAAQFAAAGLAVSM
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
DAAGNLIGRREGSGRCTKPLITGSHCDTVVGGGRFDGIIGVLAGIEVAHTLNEQGIVLDH
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
PLEVIDFLSEEPSDYGISCVGSRALSGVLDAGMLRATNGEGETLAQALTRIGGKPEALNM
CHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCC
PLRAPGSTAAFVELHIEQGPVLEARGLPIGVVTNIVGIRRVLITVIGQPDHAGTTPMDIR
CCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RDALVGAAHLIEAAHARALSLSGNPHYVVATIGRIAMTPNVPNAVPGQVELMLEVRSDSD
HHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCCCCCCCCCCEEEEEEECCCCC
AVLDAFPETLLAGAAAQLDALRLSAHAEHVSRARPTDCQPLVMDAVEQAAAQLGYPSMRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PSGAGHDAVYVAPTGPIGMIFIPCLGGRSHCSEEWIEPQQLLDGTRVLYRTLVVLDRTLA
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AHETGR
HHCCCC
>Mature Secondary Structure
MNPTVFPPLNAERLNARVEQLARFTRADVPWTRRAFSPLFTEARAWLAAQFAAAGLAVSM
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
DAAGNLIGRREGSGRCTKPLITGSHCDTVVGGGRFDGIIGVLAGIEVAHTLNEQGIVLDH
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
PLEVIDFLSEEPSDYGISCVGSRALSGVLDAGMLRATNGEGETLAQALTRIGGKPEALNM
CHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCC
PLRAPGSTAAFVELHIEQGPVLEARGLPIGVVTNIVGIRRVLITVIGQPDHAGTTPMDIR
CCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RDALVGAAHLIEAAHARALSLSGNPHYVVATIGRIAMTPNVPNAVPGQVELMLEVRSDSD
HHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCEEECCCCCCCCCCCEEEEEEECCCCC
AVLDAFPETLLAGAAAQLDALRLSAHAEHVSRARPTDCQPLVMDAVEQAAAQLGYPSMRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PSGAGHDAVYVAPTGPIGMIFIPCLGGRSHCSEEWIEPQQLLDGTRVLYRTLVVLDRTLA
CCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AHETGR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]