| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451840
Identifier: 126451840
GI number: 126451840
Start: 1082675
End: 1082941
Strand: Reverse
Name: 126451840
Synonym: BURPS1106A_1101
Alternate gene names: NA
Gene position: 1082941-1082675 (Counterclockwise)
Preceding gene: 126453175
Following gene: 126455318
Centisome position: 27.15
GC content: 58.8
Gene sequence:
>267_bases ATGGCAGGAAATCTGGTTATCGTGTGCCGGGACCAGGACGCCGACGCGTTCGATCAACTGATGCAGGAGTATGGCTCGTT CCAGACGCGGTTGTCGTCGACGGCCTGGTATCTGAACATGAACATCGTGCCCGAAACGCTGCAGGAGGACATCCTCGAGC GCGTCGGCAAATACACGACGCTTTACATCTTCGAGGCGACGAGCGTCACCTACAACACGATCGACAGCAACGCCGCCGAG ACGCTCAGCACGCTCTTCGGCGAGTGA
Upstream 100 bases:
>100_bases CGGCGAGCGCGGGCGAGGCCTTCGTCGACGAACGGACACGCCGAAGCGGGTATGATCGGTATTTGCCCCGACGGGGCCGA TGGTCTATCAGGAGGAGTGA
Downstream 100 bases:
>100_bases CCCGCCGCCGCGCGGCGTGGCGGCGCAGCGGCGCCGGGCGCCGCGGCCCCCGCGCCGGCCGGGCGGCCGGGCGTCAGGGC GCCTCCGTCTGCGGCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAGNLVIVCRDQDADAFDQLMQEYGSFQTRLSSTAWYLNMNIVPETLQEDILERVGKYTTLYIFEATSVTYNTIDSNAAE TLSTLFGE
Sequences:
>Translated_88_residues MAGNLVIVCRDQDADAFDQLMQEYGSFQTRLSSTAWYLNMNIVPETLQEDILERVGKYTTLYIFEATSVTYNTIDSNAAE TLSTLFGE >Mature_87_residues AGNLVIVCRDQDADAFDQLMQEYGSFQTRLSSTAWYLNMNIVPETLQEDILERVGKYTTLYIFEATSVTYNTIDSNAAET LSTLFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9944; Mature: 9813
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNLVIVCRDQDADAFDQLMQEYGSFQTRLSSTAWYLNMNIVPETLQEDILERVGKYTT CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEE LYIFEATSVTYNTIDSNAAETLSTLFGE EEEEEECCEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure AGNLVIVCRDQDADAFDQLMQEYGSFQTRLSSTAWYLNMNIVPETLQEDILERVGKYTT CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEE LYIFEATSVTYNTIDSNAAETLSTLFGE EEEEEECCEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA