| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126451828
Identifier: 126451828
GI number: 126451828
Start: 2715366
End: 2716583
Strand: Reverse
Name: 126451828
Synonym: BURPS1106A_2751
Alternate gene names: NA
Gene position: 2716583-2715366 (Counterclockwise)
Preceding gene: 126452853
Following gene: 126455188
Centisome position: 68.11
GC content: 68.97
Gene sequence:
>1218_bases GTGTCCGTGTCCGTCGTCAAAACCGCATTCAAGAATCTCGTGATCAAGGGCAGATCGCTGCTGCCGATTGTGCAGGGCGG GATGGGCGTCGGCGTGTCCGCGCACCGGCTCGCCGGCACGGTCGCGTCGCTCGGCGCGTGCGGGACGATCTCGAGCGTCG ACCTGCGTCGGCATCATCCCGACCTGATGGCGCGCACCGGCCGCTCGCGCGATCGCGCGCTCATCGACGCGGCGAACCTC GAAGCGCTCGATCGCGAGATCCGCGCGGCGAAGTCGCTCGCGAACGGCCGCGGGCTCGTCGCCGTCAACGTGATGCGCGC GCTGTCCGAATACGCTTCGTATGTGCGCCAGTCGTGCGAGAGCGGCGCGCACGCGGTCGTCGTCGGCGCCGGGCTGCCGC TCGACTTGCCCGAGCTGACCGCCGATTTTCCCGACGTCGCGCTGATTCCGATCCTGTCGGACGCACGCGGAATCGGGCTC GTGCTGAAGAAGTGGATGCGCAAGAACCGTCTGCCCGACGCCGTCGTCATCGAGAACCCACGCTACGCGGCGGGCCACCT CGGCGCGCCGACGACCGACAGCCTGAACAACCCGAATTTCGCGTTCCCCACGGTGCTCGAAGGCACGTTCGCGCTGTTCA AGGAGCTCGGCATCGAGCGCGAGCGGATTCCGCTGATCGCGGCGGGCGGCATTCACAGCCACGAGCAGGTGCGTCAACTG TTCGCGCTCGGCGCGAGCGCCGTGCAGCTCGGCACGCCGTTCGCGGTGACCGAAGAGGGCGACGCGCATCCGAACTTCAA GAAAGTGCTCGTCGAGGCGCAGCCGGACGACATCGTCACGTTCATGAGCGTCGCGGGGCTGCCGGCGCGCGCGGTGCGCA CGCCGTGGCTCACGAACTATCTGGAACGGGAACGGAAGCTGCAGCGTGCGGCGAAGCCGCGCAAATGCCTCGTCGGCTTC GATTGCCTGCAGCAATGCGGGCTGCGCGACGGCATCGAGAAGCACGGCCAGTTCTGCATCGACACCCGGCTCGCGTTCGC GCTCGCGGGCGACATCAAGCGCGGGCTGTTCTTCCGCGGCTCGGAAACCTTGCCGTTCGGTCACGAGATCCGCTGCGTGC GCGAGCTGATCGACTATCTGCTCACGGGCGTCAAGCGCGCGGCCGCCGCGGCGATCGCCCCCGCGGCGGCGTGCGCGCCC ATGCCCGCGCTGGGCTGA
Upstream 100 bases:
>100_bases GCGATCCGGACCGAGACCTTGACGCCGATTAAGGCGACGGAAACCCATTCGGCCGCACACTTACGCACCGGGCGTGAGCC GCCCCTTTCAGGAATTTGCC
Downstream 100 bases:
>100_bases CGGCGCCCGCGCCGGGCGCCCGCCCGTTCCCGCCGCTCGCCGGCCTGCCGCGAGCGGTTTCTCGTTTCTTTGATGGAGCC GTCATGCCATGACGCAAAGC
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase; 2-Nitropropane Dioxygenase Npd; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; Trans-2-Enoyl-ACP Reductase II; Enoyl-ACP Reductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenase/Reductase; 2-Nitropropane Dioxygenase Family Protein
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSVSVVKTAFKNLVIKGRSLLPIVQGGMGVGVSAHRLAGTVASLGACGTISSVDLRRHHPDLMARTGRSRDRALIDAANL EALDREIRAAKSLANGRGLVAVNVMRALSEYASYVRQSCESGAHAVVVGAGLPLDLPELTADFPDVALIPILSDARGIGL VLKKWMRKNRLPDAVVIENPRYAAGHLGAPTTDSLNNPNFAFPTVLEGTFALFKELGIERERIPLIAAGGIHSHEQVRQL FALGASAVQLGTPFAVTEEGDAHPNFKKVLVEAQPDDIVTFMSVAGLPARAVRTPWLTNYLERERKLQRAAKPRKCLVGF DCLQQCGLRDGIEKHGQFCIDTRLAFALAGDIKRGLFFRGSETLPFGHEIRCVRELIDYLLTGVKRAAAAAIAPAAACAP MPALG
Sequences:
>Translated_405_residues MSVSVVKTAFKNLVIKGRSLLPIVQGGMGVGVSAHRLAGTVASLGACGTISSVDLRRHHPDLMARTGRSRDRALIDAANL EALDREIRAAKSLANGRGLVAVNVMRALSEYASYVRQSCESGAHAVVVGAGLPLDLPELTADFPDVALIPILSDARGIGL VLKKWMRKNRLPDAVVIENPRYAAGHLGAPTTDSLNNPNFAFPTVLEGTFALFKELGIERERIPLIAAGGIHSHEQVRQL FALGASAVQLGTPFAVTEEGDAHPNFKKVLVEAQPDDIVTFMSVAGLPARAVRTPWLTNYLERERKLQRAAKPRKCLVGF DCLQQCGLRDGIEKHGQFCIDTRLAFALAGDIKRGLFFRGSETLPFGHEIRCVRELIDYLLTGVKRAAAAAIAPAAACAP MPALG >Mature_404_residues SVSVVKTAFKNLVIKGRSLLPIVQGGMGVGVSAHRLAGTVASLGACGTISSVDLRRHHPDLMARTGRSRDRALIDAANLE ALDREIRAAKSLANGRGLVAVNVMRALSEYASYVRQSCESGAHAVVVGAGLPLDLPELTADFPDVALIPILSDARGIGLV LKKWMRKNRLPDAVVIENPRYAAGHLGAPTTDSLNNPNFAFPTVLEGTFALFKELGIERERIPLIAAGGIHSHEQVRQLF ALGASAVQLGTPFAVTEEGDAHPNFKKVLVEAQPDDIVTFMSVAGLPARAVRTPWLTNYLERERKLQRAAKPRKCLVGFD CLQQCGLRDGIEKHGQFCIDTRLAFALAGDIKRGLFFRGSETLPFGHEIRCVRELIDYLLTGVKRAAAAAIAPAAACAPM PALG
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43414; Mature: 43283
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSVVKTAFKNLVIKGRSLLPIVQGGMGVGVSAHRLAGTVASLGACGTISSVDLRRHHP CCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCH DLMARTGRSRDRALIDAANLEALDREIRAAKSLANGRGLVAVNVMRALSEYASYVRQSCE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SGAHAVVVGAGLPLDLPELTADFPDVALIPILSDARGIGLVLKKWMRKNRLPDAVVIENP CCCCEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCC RYAAGHLGAPTTDSLNNPNFAFPTVLEGTFALFKELGIERERIPLIAAGGIHSHEQVRQL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHH FALGASAVQLGTPFAVTEEGDAHPNFKKVLVEAQPDDIVTFMSVAGLPARAVRTPWLTNY HHHCHHHHHCCCCEEECCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHH LERERKLQRAAKPRKCLVGFDCLQQCGLRDGIEKHGQFCIDTRLAFALAGDIKRGLFFRG HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEHHHHHHHHHHHHHHHCEEECC SETLPFGHEIRCVRELIDYLLTGVKRAAAAAIAPAAACAPMPALG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVSVVKTAFKNLVIKGRSLLPIVQGGMGVGVSAHRLAGTVASLGACGTISSVDLRRHHP CHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCH DLMARTGRSRDRALIDAANLEALDREIRAAKSLANGRGLVAVNVMRALSEYASYVRQSCE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SGAHAVVVGAGLPLDLPELTADFPDVALIPILSDARGIGLVLKKWMRKNRLPDAVVIENP CCCCEEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCC RYAAGHLGAPTTDSLNNPNFAFPTVLEGTFALFKELGIERERIPLIAAGGIHSHEQVRQL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCHHHHHHH FALGASAVQLGTPFAVTEEGDAHPNFKKVLVEAQPDDIVTFMSVAGLPARAVRTPWLTNY HHHCHHHHHCCCCEEECCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCHHHHCCHHHHHH LERERKLQRAAKPRKCLVGFDCLQQCGLRDGIEKHGQFCIDTRLAFALAGDIKRGLFFRG HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEHHHHHHHHHHHHHHHCEEECC SETLPFGHEIRCVRELIDYLLTGVKRAAAAAIAPAAACAPMPALG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA