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The map label for this gene is murF [H]

Identifier: 126451793

GI number: 126451793

Start: 3459019

End: 3460425

Strand: Reverse

Name: murF [H]

Synonym: BURPS1106A_3554

Alternate gene names: 126451793

Gene position: 3460425-3459019 (Counterclockwise)

Preceding gene: 126452893

Following gene: 126454548

Centisome position: 86.76

GC content: 72.57

Gene sequence:

>1407_bases
ATGACGATGCTGACCTTGCGCGAAGCCGCTGCGATGATTCCCGGCGCGACCGTGCTCGGCGACGAGCGCGCGTCGTTCGA
GCGGGTGTCGACGGACAGCCGCTCGGCGGGCCCGGGCGATCTGTTCGTCGCGCTGAAGGGCGAGCGTTTCGATGCGCACG
ATTTCGTCGGCGACGTCGCCGCGCGCGGCGCGAGCGCCGCGATCGTGTCGCGCAGCCCGGCCGAATGGAATCTGCCCGCG
CTGAAGGTCGCGGATACGCGCGCCGCGCTCGGCGCGCTCGCGCACGGCTGGCGGATGCGTTTCTCGATGCCGCTCGTCGC
GGTGACGGGCAGCAACGGCAAGACGACCGTGAAGGAAATGATCGCGTCGATCTTCGCGGCGGCCGTCGGTGAGCACGCGC
GCCTCGCGACGGCGGGCAACTTCAACAACGACGTCGGTCTGCCGCTCACGCTGCTGCGCCTTAACGCCGCGCATCGGCTC
GCGGTCGTCGAGCTCGGGATGAATCATCCGGGCGAGACCGAAATGCTCGCGAAAATCGCCGCGCCGACGGTCGCACTCGT
CAACAACGCACAGCGCGAGCATCAGGAATTCATGGCGACGGTCGAGGCGGTCGCGCTCGAGCATGCGGCCGTCATCCATG
CGCTCGGGCCGGACGGCGTCGCGGTGTTTCCGGCCGACGACGCGTACGCGGGCATCTGGCGCGTCGCGGCGACCGGCAAC
CGGATCGTCGATTTCGCGCTGCACGGCGCCGCCGGCGGCGCGCCTGCCGCGGTGACGGGCGCGCTCGACGGCAGCCTGCT
CGCGATCGACACGCCCGGCGCTCGCATCGACGTGCGGCTCAACGCGCTCGGCGAGCACAATGCGCGCAACGCGCTCGCCG
CGACGGCGGCGGCGCTCGCGGCCGGCGTGCCGCTCGCGGCGATCAAGGTCGGGCTCGAGGCGTTCGCGCCGGTGAAAGGG
CGGCTGCAGGTGGCGCGCGCGGCGGCGGGCTCGCTCGCGGGCGCGACGGTGATCGACGACACCTACAACGCGAACCCCGA
TTCGATGCGCGCCGCGATCGACGTGCTCGCCGCGCAATCGGCGCCACGCGTGCTCGTGATCGGCGAGATGGGCGAAGTCG
GCGACGAAGGGCCGGCGTTCCACCGCGAGATCGGCGCGTACGCGCGCGAGCGCGGCATCGACGCGCTCTTCGCGCTCGGC
GCGGCGACGCGGCCCGCGTGCGACGCATACGGCGCGGGCGCGCGGCATTTCGACGACGCGGCCGCACTCGTCGCCGCGCT
GCTCGCCGCGAACTTCGGCGCGCACGCGACGCTGCTCGTGAAGGGCTCGCGGTTCATGAAGATGGAGCGCGTGGTCGACG
CGCTCGCGAACGAAACCGCGTCGGGCGCAGCGCCCGGCGCACACTGA

Upstream 100 bases:

>100_bases
CGACGCAGGAAATCATGGGCAAGAAGCGCGCGTTCTCCGATCAGGACCACGCGCGCCTCGCGCTCGCCGCGCGCACGACG
CAGACTCGCGGAGGCGGCGA

Downstream 100 bases:

>100_bases
GGAAGGAAGTAAGCATGCTGCTGGCGTTGGCGCAATGGCTGCAAGGTGACGCAAGCTTTTTGCGCTTGTTCACGTACCTG
ACGTTCCGGGCGGTGATGGC

Product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase

Products: NA

Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTMLTLREAAAMIPGATVLGDERASFERVSTDSRSAGPGDLFVALKGERFDAHDFVGDVAARGASAAIVSRSPAEWNLPA
LKVADTRAALGALAHGWRMRFSMPLVAVTGSNGKTTVKEMIASIFAAAVGEHARLATAGNFNNDVGLPLTLLRLNAAHRL
AVVELGMNHPGETEMLAKIAAPTVALVNNAQREHQEFMATVEAVALEHAAVIHALGPDGVAVFPADDAYAGIWRVAATGN
RIVDFALHGAAGGAPAAVTGALDGSLLAIDTPGARIDVRLNALGEHNARNALAATAAALAAGVPLAAIKVGLEAFAPVKG
RLQVARAAAGSLAGATVIDDTYNANPDSMRAAIDVLAAQSAPRVLVIGEMGEVGDEGPAFHREIGAYARERGIDALFALG
AATRPACDAYGAGARHFDDAAALVAALLAANFGAHATLLVKGSRFMKMERVVDALANETASGAAPGAH

Sequences:

>Translated_468_residues
MTMLTLREAAAMIPGATVLGDERASFERVSTDSRSAGPGDLFVALKGERFDAHDFVGDVAARGASAAIVSRSPAEWNLPA
LKVADTRAALGALAHGWRMRFSMPLVAVTGSNGKTTVKEMIASIFAAAVGEHARLATAGNFNNDVGLPLTLLRLNAAHRL
AVVELGMNHPGETEMLAKIAAPTVALVNNAQREHQEFMATVEAVALEHAAVIHALGPDGVAVFPADDAYAGIWRVAATGN
RIVDFALHGAAGGAPAAVTGALDGSLLAIDTPGARIDVRLNALGEHNARNALAATAAALAAGVPLAAIKVGLEAFAPVKG
RLQVARAAAGSLAGATVIDDTYNANPDSMRAAIDVLAAQSAPRVLVIGEMGEVGDEGPAFHREIGAYARERGIDALFALG
AATRPACDAYGAGARHFDDAAALVAALLAANFGAHATLLVKGSRFMKMERVVDALANETASGAAPGAH
>Mature_467_residues
TMLTLREAAAMIPGATVLGDERASFERVSTDSRSAGPGDLFVALKGERFDAHDFVGDVAARGASAAIVSRSPAEWNLPAL
KVADTRAALGALAHGWRMRFSMPLVAVTGSNGKTTVKEMIASIFAAAVGEHARLATAGNFNNDVGLPLTLLRLNAAHRLA
VVELGMNHPGETEMLAKIAAPTVALVNNAQREHQEFMATVEAVALEHAAVIHALGPDGVAVFPADDAYAGIWRVAATGNR
IVDFALHGAAGGAPAAVTGALDGSLLAIDTPGARIDVRLNALGEHNARNALAATAAALAAGVPLAAIKVGLEAFAPVKGR
LQVARAAAGSLAGATVIDDTYNANPDSMRAAIDVLAAQSAPRVLVIGEMGEVGDEGPAFHREIGAYARERGIDALFALGA
ATRPACDAYGAGARHFDDAAALVAALLAANFGAHATLLVKGSRFMKMERVVDALANETASGAAPGAH

Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]

COG id: COG0770

COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MurCDEF family [H]

Homologues:

Organism=Escherichia coli, GI1786274, Length=457, Percent_Identity=40.2625820568928, Blast_Score=253, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004101
- InterPro:   IPR013221
- InterPro:   IPR000713
- InterPro:   IPR005863 [H]

Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]

EC number: =6.3.2.10 [H]

Molecular weight: Translated: 47786; Mature: 47655

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLTLREAAAMIPGATVLGDERASFERVSTDSRSAGPGDLFVALKGERFDAHDFVGDVA
CCEEEHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
ARGASAAIVSRSPAEWNLPALKVADTRAALGALAHGWRMRFSMPLVAVTGSNGKTTVKEM
HCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCEEEEECCEEEEECCCCCHHHHHH
IASIFAAAVGEHARLATAGNFNNDVGLPLTLLRLNAAHRLAVVELGMNHPGETEMLAKIA
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCHHEEEEEEECCCCCCHHHHHHHHH
APTVALVNNAQREHQEFMATVEAVALEHAAVIHALGPDGVAVFPADDAYAGIWRVAATGN
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEEECCC
RIVDFALHGAAGGAPAAVTGALDGSLLAIDTPGARIDVRLNALGEHNARNALAATAAALA
EEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHH
AGVPLAAIKVGLEAFAPVKGRLQVARAAAGSLAGATVIDDTYNANPDSMRAAIDVLAAQS
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCC
APRVLVIGEMGEVGDEGPAFHREIGAYARERGIDALFALGAATRPACDAYGAGARHFDDA
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCHHHHH
AALVAALLAANFGAHATLLVKGSRFMKMERVVDALANETASGAAPGAH
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TMLTLREAAAMIPGATVLGDERASFERVSTDSRSAGPGDLFVALKGERFDAHDFVGDVA
CEEEHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
ARGASAAIVSRSPAEWNLPALKVADTRAALGALAHGWRMRFSMPLVAVTGSNGKTTVKEM
HCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCEEEEECCEEEEECCCCCHHHHHH
IASIFAAAVGEHARLATAGNFNNDVGLPLTLLRLNAAHRLAVVELGMNHPGETEMLAKIA
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCHHEEEEEEECCCCCCHHHHHHHHH
APTVALVNNAQREHQEFMATVEAVALEHAAVIHALGPDGVAVFPADDAYAGIWRVAATGN
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEEEECCC
RIVDFALHGAAGGAPAAVTGALDGSLLAIDTPGARIDVRLNALGEHNARNALAATAAALA
EEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHH
AGVPLAAIKVGLEAFAPVKGRLQVARAAAGSLAGATVIDDTYNANPDSMRAAIDVLAAQS
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCC
APRVLVIGEMGEVGDEGPAFHREIGAYARERGIDALFALGAATRPACDAYGAGARHFDDA
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHCCCCCCHHHHH
AALVAALLAANFGAHATLLVKGSRFMKMERVVDALANETASGAAPGAH
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]