| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451744
Identifier: 126451744
GI number: 126451744
Start: 3076096
End: 3078165
Strand: Reverse
Name: 126451744
Synonym: BURPS1106A_3158
Alternate gene names: NA
Gene position: 3078165-3076096 (Counterclockwise)
Preceding gene: 126455449
Following gene: 126452871
Centisome position: 77.18
GC content: 68.65
Gene sequence:
>2070_bases TTGGATACGCTTCCGGTTTCCGCTTCGGTGACTGACCTCGGCGGCGCCGGGGCGGGGAGCGCCATGCTGGCGCTCGCCGG CGGGGCGCAACATGGCTCGATCCATGCGAGCGCGCTCGGTTCGGCCGACGCATCGATCAGCAACGTCGCACTCGACAACT TGACGGGTACGCTTGCGAACGCGGCGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAGCAAT GCAGTCGGCACGCTGACGAATCTGGCGAACAACAATCCGTTGCCCGGCGCACTGAGCAATGCGGTGGGCACGCTGCAAAA CGCGGCGACGAACAACCCGCTGTCGGGTGTCGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAACAACAATCCGT TGCCGGGTGCGCTGAGCAATGCGGTGGGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGTCGCGAGCAAT GCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCACGCTGCAAAA CGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAACAGCAATCCGC TGCCGGGTGCGCTGAGCAATGCGGCGAGCACGCTGCAGAACGCGGCGACGAACAACCCGCTGTCGGGCGTCGCGAGCAAC GCGGTCGGCACGCTGACGAATCTGGCGAACAGCAATCCGCTGCCGGGTGCGCTGAGCAATGCGGTGAGCACGCTGCAAAA CGCGGCGGCGAACAATCCGCTGTCGGGTGTCGCGAGCAACGCGGTCGGCACGCTGACGAATCTGGCGAACAACAATCCGC TGCCGGGTGCGCTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGGCGAACAACCCGCTGTCGGGCGTCGCGAGCAAT GCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAATGCGGTGAGCACGCTGCAAAA CGCGGCGGCGAACAACCCGCTGTCGGGTGTCGCGAACAACGCGGTCGGCACGCTGACGAATCTGGCGAACAACAATCCGC TGCCCGGCGCACTGAGCAATGCGGTGAGCACGCTGCAAAACGCGGCGACGAACAACCCGCTGTCGGGTGTCGCGAGCAAT GCAGTCGGCACGCTGACGAATCTGGCGAACAATAATCCGCTGCCGGGTGCACTGAGCAACGTGGCTGGCGCATTGGCCGG CGCCGCGAGCAATGGCTCGGGAGCACTGACGGGCGCCGCCGGCAACGTGACGGGCGCGCTCGCCGGCGCGGGCAGCACCG CGGCCGGCGCGATCTCGGGGGCGATGAGCAACAACCCGTTGCCGGGCGTCGTGAACAACGTGGTCGGCACGCTCGCGAAC GCGATTGGCAGCAATCCGATCACGCCCATCACGAGCGTCGCGAGCGGTCTCGCGAACGCGCTTTCCGTTGCCAATCCCGC CGCGCTGACCGCGGCCGCAAACACCGTCGCGGGCACGCTCGCGCGCGCGGCGAACGGCACCCCGGTCGCGGGCGCGATCG GCGGCCTCGTGGCCGCGCTGCCCGTCGCTAATCCGGCCGGCGCGCTGACGAGCGCGGCAAACAACGCAGCAAGCACGATC GCGACGGTGGCGGGCACCAACCCGGCTGCCGCGATCGGCGGCGTCGCGGGCGCATTGACGGGGGCGGCCGGCACCGGCGT GGCGACGGCCTCGCAACTCGGAAGCGTCGGCTCGGCGCTGATGGGTTCGGGCGCGGCCTCGGCTGGCAAGGTTTTGACGT CGGGCAGCGCCGCATTCGGCAGCGCGGCCGCGTCGGCCGGCTCGCTGCTGACGACGGGAGCGGCCGCCGCGAGCTCGGTC GTCAATTCGCTGGGCTCGTCGGTCGGCGCAGTGGTGGCGTCGCTGCCGAACCTGAGCGTGTCGTCGTCGAAGTCGACGGC TGCGGCGTCGAATCCGCTGGCACCCGTCTCGTCGACGGTCGCGACGCTCGTCGGCGCGCTGCCGAAGTAA
Upstream 100 bases:
>100_bases GAGGTCACTTATGAAACAAAACTTCAAGTTGACGAGCATTGCATTGTCCGCAGCGGTTGCGTTCGGAGTCGCGGCTGCGA CGCCGGCCGTCGCAGCCGGA
Downstream 100 bases:
>100_bases TGGCGCGGCGCGTTTCGGTCGGATAGCGGAACGCGCCCCTGGTGGAGAGTAGTCAGCCGGAAGGCGAAGCGGGGCGGCAT GGCGGTGACGTCATGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANSNPLPGALSNAASTLQNAATNNPLSGVASN AVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASN AVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGAGSTAAGAISGAMSNNPLPGVVNNVVGTLAN AIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTI ATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLLTTGAAAASSV VNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Sequences:
>Translated_689_residues MDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANSNPLPGALSNAASTLQNAATNNPLSGVASN AVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASN AVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGAGSTAAGAISGAMSNNPLPGVVNNVVGTLAN AIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTI ATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLLTTGAAAASSV VNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK >Mature_689_residues MDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVALDNLTGTLANAASTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANSNPLPGALSNAASTLQNAATNNPLSGVASN AVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVASN AVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANNAVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASN AVGTLTNLANNNPLPGALSNVAGALAGAASNGSGALTGAAGNVTGALAGAGSTAAGAISGAMSNNPLPGVVNNVVGTLAN AIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVAGAIGGLVAALPVANPAGALTSAANNAASTI ATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSALMGSGAASAGKVLTSGSAAFGSAAASAGSLLTTGAAAASSV VNSLGSSVGAVVASLPNLSVSSSKSTAAASNPLAPVSSTVATLVGALPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63361; Mature: 63361
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50176 ARM_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVALDNLTGTLAN CCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHH AASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AVGTLTNLANNNPLPGALSNAVGTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH AVSTLQNAAANNPLSGVANNAVGTLTNLANSNPLPGALSNAASTLQNAATNNPLSGVASN HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH AVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VAGALAGAASNGSGALTGAAGNVTGALAGAGSTAAGAISGAMSNNPLPGVVNNVVGTLAN HHHHHHCCCCCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVAGAIGGLVAAL HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSAL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MGSGAASAGKVLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSV HCCCCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSSKSTAAASNPLAPVSSTVATLVGALPK CCCCCHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDTLPVSASVTDLGGAGAGSAMLALAGGAQHGSIHASALGSADASISNVALDNLTGTLAN CCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHH AASTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AVGTLTNLANNNPLPGALSNAVGTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH AVSTLQNAAANNPLSGVANNAVGTLTNLANSNPLPGALSNAASTLQNAATNNPLSGVASN HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AVGTLTNLANSNPLPGALSNAVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH AVSTLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVSTLQNAAANNPLSGVANN HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AVGTLTNLANNNPLPGALSNAVSTLQNAATNNPLSGVASNAVGTLTNLANNNPLPGALSN HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VAGALAGAASNGSGALTGAAGNVTGALAGAGSTAAGAISGAMSNNPLPGVVNNVVGTLAN HHHHHHCCCCCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIGSNPITPITSVASGLANALSVANPAALTAAANTVAGTLARAANGTPVAGAIGGLVAAL HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PVANPAGALTSAANNAASTIATVAGTNPAAAIGGVAGALTGAAGTGVATASQLGSVGSAL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MGSGAASAGKVLTSGSAAFGSAAASAGSLLTTGAAAASSVVNSLGSSVGAVVASLPNLSV HCCCCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSSKSTAAASNPLAPVSSTVATLVGALPK CCCCCHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA