| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cysC [H]
Identifier: 126451714
GI number: 126451714
Start: 2543543
End: 2545012
Strand: Reverse
Name: cysC [H]
Synonym: BURPS1106A_2580
Alternate gene names: 126451714
Gene position: 2545012-2543543 (Counterclockwise)
Preceding gene: 126454868
Following gene: 126452346
Centisome position: 63.81
GC content: 73.06
Gene sequence:
>1470_bases ATGCGGTCCTGCGATGACTTTCTACGGACATCGGAATTGTCCATCGCGGCGGTCAACAGCCTGCGGCGCACCATCGCGCC GTCGCATCGGGTGCTGGACGCGTGCGGATCGGGCGCCGCCTGCCTGCTGGCGTCGCGCTACGGCGCGAAGCAGGTGGTGG CGCTCGCGGCCGCAGAGGCGACGCTCGTGGGGGCGCGAGCCGGCGCGAACGGTCCCGGCGAACGGATATCGTTCGTCGAC GCCGAGCAGGCTGCGGCGCTCGTCGCGCGGCAAGGGCGGTTCGACGTCGTGCTCGGGCTCGCAGGCGGCGGGCGCGACGG GCTCGATCCGCATTACGGCGCTCGGCTCGACGCGTTCGCACGGCGCTTCGGCACGGCGAACGTTGCCGTCGTGCCCAACG GTGTGCGCTACGACGCGCAACTCGTCGAATGGCGCGAGGCCGAGCGGCTCGAGGCGGACGTCGCGGCCAGGCAGCGCGCC CTCGAAGCGCGCTACGACCTCACGCTTGGCCCGGTGCTCGACCAGGTGGCCGCCGGGGCCGCGCCGCGTGGCCGCGTGCG CGCCGACGCGCTGCGCGCGCTCTGCGCGCGGCTGCCGTTTCTGTCGTGCCGGCCGGGCGATGGCGGTGATGCCGGCACAA GCGGCACAAGCGGCACGGCGGCGCCCGAGCATGTCGAGTTGACCGCCGCGCACGGCGGCCGTGCCGACGGCGTGCTGTGG ACGCAGGAGCTGATACACGACGGCATCGTCATCGAACGGATTCAGGGGTGCAGCTGGCTCGACGAACGCGTCGATCTCGA GGCGGGCGACGCGATCGCGGTGCCCGTCGCCGACATGGCGCGGGCCGCGCCGCTCGACGGCGGCGAAGCGCCGCCGCAGC TCGCGCCCGCGCCGCGCGCATCCGGCGCGCCCGCGCCGCTCGTCTTCTGGCTGACCGGTATCTCGGGGGCCGGCAAGACG ACGATCGCGACACGTTTCAAGCAGCGGGCGGACGCCGATGCGTGGCCCACCGTCGTGCTCGACGGCGACACGCTGCGCGG CGGCCTCAACGCGGATCTCGGCTTCTGCGACGCGGACCGCGCGGAGAACGTGCGCCGCATCGCCGAGGTCGCGGCGCTGA TGGCCGACACGGGGCTCGTCGTCGTCGTCTCGTGCATTTCGCCCAGGCGGTCGTTTCGCGAAACGGCGCGCGAAATCGTC GGCGCCGAGCGCTTCGTCGAGGTGTTCGTCGATACGCCGCCCGCGGTCGCGCAGGCGCGCGATCCGAAAGGGCTGTATCG GCGCGCACGCGCGGGGTTGATCGCGTCGTTCACCGGCATCGATTCGGACTACGAGCCACCGCCGGATCCGCAATTGCGCA TCGATACGACGACGCACGACGTCGAGGACGCGACGCAGATGCTGCGCCGCTACTACGTCGACGCGCGCCTGTCCGGCGCG CGTGCGGGCACCGCCGAGTGCGCGGCGTGA
Upstream 100 bases:
>100_bases CAAATACGACATTCCGAGGGCGCGTGCCTGTATTGCACGCGCATGTCAAAACGATTAAATGACGACGTCCATGAGAGAGC GTAGACGGGGTATTGCCTTT
Downstream 100 bases:
>100_bases CGCCGCCACTCCGTTCCTTCCTTCGCCGACGGCCAATAGCGAGACAAACGATGAGCGTTCACGACATGACTCACCCGGGC GAGCTCGCACCGGTGCGAGC
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGARAGANGPGERISFVD AEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRA LEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVELTAAHGGRADGVLW TQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPAPRASGAPAPLVFWLTGISGAGKT TIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIV GAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQMLRRYYVDARLSGA RAGTAECAA
Sequences:
>Translated_489_residues MRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGARAGANGPGERISFVD AEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRA LEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVELTAAHGGRADGVLW TQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPAPRASGAPAPLVFWLTGISGAGKT TIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIV GAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQMLRRYYVDARLSGA RAGTAECAA >Mature_489_residues MRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEATLVGARAGANGPGERISFVD AEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFARRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRA LEARYDLTLGPVLDQVAAGAAPRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVELTAAHGGRADGVLW TQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPAPRASGAPAPLVFWLTGISGAGKT TIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADRAENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIV GAERFVEVFVDTPPAVAQARDPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQMLRRYYVDARLSGA RAGTAECAA
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=161, Percent_Identity=53.416149068323, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI34447231, Length=161, Percent_Identity=51.5527950310559, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI62912492, Length=161, Percent_Identity=51.5527950310559, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1789107, Length=167, Percent_Identity=49.7005988023952, Blast_Score=171, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17542422, Length=161, Percent_Identity=45.9627329192547, Blast_Score=143, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322852, Length=172, Percent_Identity=44.1860465116279, Blast_Score=155, Evalue=1e-38, Organism=Drosophila melanogaster, GI24667032, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667028, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667036, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667040, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI116007838, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24667044, Length=161, Percent_Identity=49.0683229813665, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 51418; Mature: 51418
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEA CCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH TLVGARAGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFA HEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH RRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRALEARYDLTLGPVLDQVAAGA HHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC APRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVELTAAHGGRADGVLW CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHH TQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPAPRA HHHHHHCCHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCC SGAPAPLVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADR CCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH AENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIVGAERFVEVFVDTPPAVAQAR HHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC DPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQMLRRYYVDARLSGA CCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC RAGTAECAA CCCCHHCCC >Mature Secondary Structure MRSCDDFLRTSELSIAAVNSLRRTIAPSHRVLDACGSGAACLLASRYGAKQVVALAAAEA CCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH TLVGARAGANGPGERISFVDAEQAAALVARQGRFDVVLGLAGGGRDGLDPHYGARLDAFA HEEECCCCCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH RRFGTANVAVVPNGVRYDAQLVEWREAERLEADVAARQRALEARYDLTLGPVLDQVAAGA HHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC APRGRVRADALRALCARLPFLSCRPGDGGDAGTSGTSGTAAPEHVELTAAHGGRADGVLW CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHH TQELIHDGIVIERIQGCSWLDERVDLEAGDAIAVPVADMARAAPLDGGEAPPQLAPAPRA HHHHHHCCHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCC SGAPAPLVFWLTGISGAGKTTIATRFKQRADADAWPTVVLDGDTLRGGLNADLGFCDADR CCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH AENVRRIAEVAALMADTGLVVVVSCISPRRSFRETAREIVGAERFVEVFVDTPPAVAQAR HHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC DPKGLYRRARAGLIASFTGIDSDYEPPPDPQLRIDTTTHDVEDATQMLRRYYVDARLSGA CCHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC RAGTAECAA CCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]