Click here to switch to the map view.

The map label for this gene is 126451702

Identifier: 126451702

GI number: 126451702

Start: 1677950

End: 1678381

Strand: Direct

Name: 126451702

Synonym: BURPS1106A_1717

Alternate gene names: NA

Gene position: 1677950-1678381 (Clockwise)

Preceding gene: 126454477

Following gene: 126452883

Centisome position: 42.07

GC content: 65.97

Gene sequence:

>432_bases
ATGAGCGATTACACCCCTGTTTTCGAAATGTCGATGCCGATCCGCTGGGGCGACATGGATGCGTTCGGCCACGTGAACAA
CACCGTCTACTTCCGCTACATGGAAGAAGCGCGCGTCACGTGGTTCGGCAAGCTCGGCATCGGGGGCGGCAACGGCGAAG
GGCAGGGGCCCGTCGTCGTCAACGCGTCGATGGAATTCCTGCGCCAACTGCATTACCCGGGCGACGTGATCGCGCGCCTC
TCAGCCGCGAAGCCGGGGCGCAGCAGCTTCGACACGGCGTTCGAGCTGACCCGCTCGGACGACCCCGAGCGCGTGTACGC
GCGGGGCGCCGCGCGCTGCGTGTGGGTCGACTACGCGCTCGGCAAGTCGGTGCCGCTGCCGGACCTGCTTCGGAACACGA
TCGAAAGCGCGCTGCAGGCGAAAGTCGATTGA

Upstream 100 bases:

>100_bases
CGCAGTTCATCAACGGCTCGATCGTGTCGGCCGACGACGGCCTCGGGCTCGCGTGAGCGGCCGCGCCGAACGGTTTCACC
TTGCAGAAAAGAAGAGTGCG

Downstream 100 bases:

>100_bases
GCGGTGCGGCGCGCGGTCCGGCATTACCGGCTTCCTTGACGCTGATTCGCGGGGCTTCGCGAACGTAGGCCATGCAGTGC
TGGATCGGCACTGCATGGCG

Product: thioesterase family protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thioesterase Family Protein Domain Protein; Thiesterase

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSDYTPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEEARVTWFGKLGIGGGNGEGQGPVVVNASMEFLRQLHYPGDVIARL
SAAKPGRSSFDTAFELTRSDDPERVYARGAARCVWVDYALGKSVPLPDLLRNTIESALQAKVD

Sequences:

>Translated_143_residues
MSDYTPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEEARVTWFGKLGIGGGNGEGQGPVVVNASMEFLRQLHYPGDVIARL
SAAKPGRSSFDTAFELTRSDDPERVYARGAARCVWVDYALGKSVPLPDLLRNTIESALQAKVD
>Mature_142_residues
SDYTPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEEARVTWFGKLGIGGGNGEGQGPVVVNASMEFLRQLHYPGDVIARLS
AAKPGRSSFDTAFELTRSDDPERVYARGAARCVWVDYALGKSVPLPDLLRNTIESALQAKVD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15883; Mature: 15752

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYTPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEEARVTWFGKLGIGGGNGEGQGPVVV
CCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEE
NASMEFLRQLHYPGDVIARLSAAKPGRSSFDTAFELTRSDDPERVYARGAARCVWVDYAL
EHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHEEECCCCCHHHHHHCCCCEEEEEEECC
GKSVPLPDLLRNTIESALQAKVD
CCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDYTPVFEMSMPIRWGDMDAFGHVNNTVYFRYMEEARVTWFGKLGIGGGNGEGQGPVVV
CCCCCEEEEECCEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEE
NASMEFLRQLHYPGDVIARLSAAKPGRSSFDTAFELTRSDDPERVYARGAARCVWVDYAL
EHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHEEECCCCCHHHHHHCCCCEEEEEEECC
GKSVPLPDLLRNTIESALQAKVD
CCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA