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The map label for this gene is atpH

Identifier: 126451679

GI number: 126451679

Start: 3952558

End: 3953097

Strand: Reverse

Name: atpH

Synonym: BURPS1106A_4045

Alternate gene names: 126451679

Gene position: 3953097-3952558 (Counterclockwise)

Preceding gene: 126454664

Following gene: 126454771

Centisome position: 99.11

GC content: 67.04

Gene sequence:

>540_bases
ATGGCCGAACTTGCAACCATCGCCCGCCCTTACGCAGAAGCGCTGTTCCGCGTGGCCGAGGGGGGTGACATCTCCGCCTG
GTCCACGCTCGTGCAAGAGCTGGCTCAGGTTGCGCAACTGCCCGAAGTGCTGTCCGTCGCGTCGAGCCCGAAAGTGAGCC
GCACGCAGGTGGCCGAGCTGCTGCTCGCCGCGCTGAAGTCGCCGCTCGCGAGCGGCGCGCAGGCGAAGAACTTCGTGCAG
ATGCTGGTCGACAATCATCGTATCGCGCTGTTGCCGGAAATCGCCGTGCAGTTCGAAGCGCTGAAGAACGCGCGCGAAGG
CGCGGCAGACGTGCAGATCGTCAGCGCGTTCCCGCTCGAAGGCGCGCAGCTCGCGGAGCTTGTCACGAGCCTCGAGCGCA
AGTTCAAGCGCAAGCTGAAGCCGGCCGTCGAAGTCGATTCGTCGCTGATCGGCGGCGTGCGCGTGACGGTGGGCGACGAA
GTGCTCGATACCTCGGTCCGCGCGCGGCTCGCCGGCATGCAGGCGGCGCTGACCGCTTGA

Upstream 100 bases:

>100_bases
CCGCGCTCGCCGTGAAGGGCGCCGAGCAGATCCTGAAGCGCGAAGTCGATCAAACGGCCCACGCCGAACTGCTGAATCAA
CTGAAAGCCGAGCTCTGATC

Downstream 100 bases:

>100_bases
GCGAGCGCAGCCGGCACGCAACAGAATTGAAAATCAGGAGCGAATAATGCAACTCAATCCCTCTGAGATCAGCGAGCTGA
TCAAGAGCCGGATCCAGGGC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAELATIARPYAEALFRVAEGGDISAWSTLVQELAQVAQLPEVLSVASSPKVSRTQVAELLLAALKSPLASGAQAKNFVQ
MLVDNHRIALLPEIAVQFEALKNAREGAADVQIVSAFPLEGAQLAELVTSLERKFKRKLKPAVEVDSSLIGGVRVTVGDE
VLDTSVRARLAGMQAALTA

Sequences:

>Translated_179_residues
MAELATIARPYAEALFRVAEGGDISAWSTLVQELAQVAQLPEVLSVASSPKVSRTQVAELLLAALKSPLASGAQAKNFVQ
MLVDNHRIALLPEIAVQFEALKNAREGAADVQIVSAFPLEGAQLAELVTSLERKFKRKLKPAVEVDSSLIGGVRVTVGDE
VLDTSVRARLAGMQAALTA
>Mature_178_residues
AELATIARPYAEALFRVAEGGDISAWSTLVQELAQVAQLPEVLSVASSPKVSRTQVAELLLAALKSPLASGAQAKNFVQM
LVDNHRIALLPEIAVQFEALKNAREGAADVQIVSAFPLEGAQLAELVTSLERKFKRKLKPAVEVDSSLIGGVRVTVGDEV
LDTSVRARLAGMQAALTA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=174, Percent_Identity=34.4827586206897, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BURM7 (A3MQJ6)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001082532.1
- ProteinModelPortal:   A3MQJ6
- SMR:   A3MQJ6
- GeneID:   4893954
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_3012
- TIGR:   BMA10247_3012
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- ProtClustDB:   PRK05758
- BioCyc:   BMAL320389:BMA10247_3012-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 18957; Mature: 18826

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELATIARPYAEALFRVAEGGDISAWSTLVQELAQVAQLPEVLSVASSPKVSRTQVAEL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLAALKSPLASGAQAKNFVQMLVDNHRIALLPEIAVQFEALKNAREGAADVQIVSAFPLE
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GAQLAELVTSLERKFKRKLKPAVEVDSSLIGGVRVTVGDEVLDTSVRARLAGMQAALTA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELATIARPYAEALFRVAEGGDISAWSTLVQELAQVAQLPEVLSVASSPKVSRTQVAEL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLAALKSPLASGAQAKNFVQMLVDNHRIALLPEIAVQFEALKNAREGAADVQIVSAFPLE
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GAQLAELVTSLERKFKRKLKPAVEVDSSLIGGVRVTVGDEVLDTSVRARLAGMQAALTA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA