Click here to switch to the map view.

The map label for this gene is 126451670

Identifier: 126451670

GI number: 126451670

Start: 3872978

End: 3873652

Strand: Reverse

Name: 126451670

Synonym: BURPS1106A_3968

Alternate gene names: NA

Gene position: 3873652-3872978 (Counterclockwise)

Preceding gene: 126454833

Following gene: 126454091

Centisome position: 97.12

GC content: 68.44

Gene sequence:

>675_bases
ATGTTCAAGTTCATTACCGCGCGGCGCCTGGCGGCCGCGTCCGTGCTGGCGCTGCTCGCCGCATGCGCCGCGCCCGCGAA
GCATGTCGACTACACGGCATTCAAGAAGAGCCAGCCGCGCGCGATCCTGCTGCTGCCGCCGCAGAACGACACGTCGGACG
TGAAGGCGACCTACGGCCTGCTGTCGCAGATGACGCGGCCCGTCGCCGAAGCGGGTTACTACGTCGTGCCCGTCGCCGTG
ATGGAGGAGACCTTCAAGCAGAACGGCCTGACGAACGCCGCCGACATCCAGACCGTATCGCCCGCGAAGCTGCGCGACAT
TTTCGGCGCGGACGCGGCGCTGTACACGACGGTCACGCAGTACGGCTCCGTCTACACGGTGCTCGACAGCACGACGGTCG
TGTCCGCGTCCGCGAAGCTCGTCGACTTGCGCACCGGCGACCTGCTGTGGCAGGGCAGCGGCCGCGCGACCGGCAAGGAA
CTCGGCTCCAACGTGGATTTCAGCGGCTTCGGGTTGATCGCGACGCTCGCGCAGGCGGCCGTCAAGCAGATCGCGCACAC
GCTGAGCGACGACGCAGTCGACGTGGCGGGGCTCACGAGCGGCCGGATGCTGTCGGCCGGCCAGCCGAACGGCCTGCTGT
ACGGCCCGCGTTCGCCGAAGTACGGGACGGATTGA

Upstream 100 bases:

>100_bases
TCCTGCTGAAGAAGAAAGCCGCCGCGCCGCAAGCGAAGCCGTCAGCGCCCGCGCAGCCGCAAACCCAAACCCAAACGCAG
GCGCAACAATGAGGGCCGCC

Downstream 100 bases:

>100_bases
GCGGAGGGTTGCGCGCAATCGGCTCGAAACGGCTCGGCCCGGGATGGCCGAGCCGTTTTTGCTTGGCGCGGCCGCGCCGG
CATGCGCCGCGCTTGCTGCC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFKFITARRLAAASVLALLAACAAPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV
MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE
LGSNVDFSGFGLIATLAQAAVKQIAHTLSDDAVDVAGLTSGRMLSAGQPNGLLYGPRSPKYGTD

Sequences:

>Translated_224_residues
MFKFITARRLAAASVLALLAACAAPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV
MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE
LGSNVDFSGFGLIATLAQAAVKQIAHTLSDDAVDVAGLTSGRMLSAGQPNGLLYGPRSPKYGTD
>Mature_224_residues
MFKFITARRLAAASVLALLAACAAPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV
MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE
LGSNVDFSGFGLIATLAQAAVKQIAHTLSDDAVDVAGLTSGRMLSAGQPNGLLYGPRSPKYGTD

Specific function: Unknown

COG id: COG4380

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008517 [H]

Pfam domain/function: PF05643 DUF799 [H]

EC number: NA

Molecular weight: Translated: 23551; Mature: 23551

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFITARRLAAASVLALLAACAAPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
LSQMTRPVAEAGYYVVPVAVMEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQ
HHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
YGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKELGSNVDFSGFGLIATLAQAA
CCCEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
VKQIAHTLSDDAVDVAGLTSGRMLSAGQPNGLLYGPRSPKYGTD
HHHHHHHHCCCCEEECCCCCCCEECCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MFKFITARRLAAASVLALLAACAAPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
LSQMTRPVAEAGYYVVPVAVMEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQ
HHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
YGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKELGSNVDFSGFGLIATLAQAA
CCCEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
VKQIAHTLSDDAVDVAGLTSGRMLSAGQPNGLLYGPRSPKYGTD
HHHHHHHHCCCCEEECCCCCCCEECCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]