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The map label for this gene is sun [H]

Identifier: 126451630

GI number: 126451630

Start: 155171

End: 156580

Strand: Direct

Name: sun [H]

Synonym: BURPS1106A_0165

Alternate gene names: 126451630

Gene position: 155171-156580 (Clockwise)

Preceding gene: 126454661

Following gene: 126452437

Centisome position: 3.89

GC content: 72.48

Gene sequence:

>1410_bases
ATGACCCAGACTCGCCCTTCCCGTTCCCGCGCATCCGGCGCGCCCGCTCGTGCGCCGCGCCTGTCGGCGCTGCATCTCGT
TCCCGATTCGCTAGGCTTCGCGCTCGACGGCGCCGCGCAGGCGGTCGACGCGGTCGATCGCGGCGCCGCGCTGCCCGCGG
CGCTCGCCGCCGTTCACGCAGCGCTGCCTTCGAACGCGCAGGCGGCGTCGCGCGGCGCGATCCAGGACATCGGGTATCGC
GCGATGCGCCGCCGCGGCACGGCGGACTGGCTGATCGCGCAACTCGTCGCGAAGGCGCCGCCGGCGCACGTGCATGCGCT
TCTCGTCTGCGCGTTCGCGCTCCTCGTCGACGACGAGCACGCCGCTTATGCGCCCTTCACCGTCGTCGATCAGGCCGTGA
CCGCGATCGGCGCGCGCCGCGAGTGCTCGTTTGCGAAGGGGCTCGTCAACGCGGTGCTGCGCCGGTTTCTGCGCGAGCGG
GCCGCGTGGCTCGAGCGGCTGCAGGCCGATCGGCGCGCGCTTTGGAACTACGAGCCGTGGTGGATCGATGCCGTCGAGCG
CGCGTGGCCCGATGCATGGCAGCGCATTCTCGCCGCGGGCGATGCGCCCGGCCCGCTCACGCTGCGCGTGAATGCGCGCC
GGATGACGGCGGACGCGTATCTCGACACGTTGCGCGCCGAGCGGATCGACGCCGAGAAGATCGGCCTTCACGCGATACGG
CTTGCATCGGCGCGGCCCGTCGAGCGCATTCCGGGCTTCGCGGACGGCATCGTGTCGGTGCAGGACGCCGGCGCGCAGCT
CTCGGCCGAATGGCTCGGCGCGCGCGACGGCATGCGCGTGCTCGACGCGTGCGCGGCGCCCGGCGGCAAGACGGGCCACA
TTCTCGAGCTCGCGCACGCCGAGGTGGTCGCGCTCGAAAGCGATCCGGCGCGCGCGCCGCGCATCGGCGAGAATCTCGCG
CGGCTGTCGCTCACGGCCGACGTGCGCGTCGGCGACGCGGCAGACCCCGCGCAATGGCACGACGGACGTCCGTTCGACCG
GGTCCTCGCCGATGTGCCGTGCTCCGCGTCGGGCATCGTGCGCCGCCATCCGGACATCCGCTGGCTGCGCCGCGCGGCCG
ACATTCCCGCGCTCGTCGCCGAGCAGCGGCGCATCCTGAGCGCGCTCTGGCCGCTCGTGAAACCCGGCGGAGAGTTGCTG
TACGTGACCTGCTCGATCTTTCCGGAAGAGGGCGAGCTGCAGGCGCGCTGGTTTGGAGACGCCTGTCAAGATGCGGTACG
ATTGGACGCGCCCGGGCAGTTGCTGCCGCAGGGCGCGACAGGCGGGGCGCCGGCCGTCGGGGGATCGGGCGAGTCCGGCC
GGCATGTCGATCACGACGGATTTTTCTACGCGCGCTTTCAGAAACGGTGA

Upstream 100 bases:

>100_bases
GCGCGCTACAATATCGCGCTGACCGGCCGCGGGCCGGCCACCTCGGCGCCTTCCTACCACCCGCCCGGCGCGACCGTGTG
CCGCGGGCACTGCTGATCCG

Downstream 100 bases:

>100_bases
CGATCAAACGCTTCTTTCCACTCCGGCTCGCGGCCGTGCTCTGGGTCGCGCTGACGCTGTGCCTCGCTGCCGTTCCTGCC
GCGCGCGCCGATACGATCGC

Product: ribosomal RNA small subunit methyltransferase B

Products: NA

Alternate protein names: 16S rRNA m5C967 methyltransferase; rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MTQTRPSRSRASGAPARAPRLSALHLVPDSLGFALDGAAQAVDAVDRGAALPAALAAVHAALPSNAQAASRGAIQDIGYR
AMRRRGTADWLIAQLVAKAPPAHVHALLVCAFALLVDDEHAAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRFLRER
AAWLERLQADRRALWNYEPWWIDAVERAWPDAWQRILAAGDAPGPLTLRVNARRMTADAYLDTLRAERIDAEKIGLHAIR
LASARPVERIPGFADGIVSVQDAGAQLSAEWLGARDGMRVLDACAAPGGKTGHILELAHAEVVALESDPARAPRIGENLA
RLSLTADVRVGDAADPAQWHDGRPFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSALWPLVKPGGELL
YVTCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAVGGSGESGRHVDHDGFFYARFQKR

Sequences:

>Translated_469_residues
MTQTRPSRSRASGAPARAPRLSALHLVPDSLGFALDGAAQAVDAVDRGAALPAALAAVHAALPSNAQAASRGAIQDIGYR
AMRRRGTADWLIAQLVAKAPPAHVHALLVCAFALLVDDEHAAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRFLRER
AAWLERLQADRRALWNYEPWWIDAVERAWPDAWQRILAAGDAPGPLTLRVNARRMTADAYLDTLRAERIDAEKIGLHAIR
LASARPVERIPGFADGIVSVQDAGAQLSAEWLGARDGMRVLDACAAPGGKTGHILELAHAEVVALESDPARAPRIGENLA
RLSLTADVRVGDAADPAQWHDGRPFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSALWPLVKPGGELL
YVTCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAVGGSGESGRHVDHDGFFYARFQKR
>Mature_468_residues
TQTRPSRSRASGAPARAPRLSALHLVPDSLGFALDGAAQAVDAVDRGAALPAALAAVHAALPSNAQAASRGAIQDIGYRA
MRRRGTADWLIAQLVAKAPPAHVHALLVCAFALLVDDEHAAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRFLRERA
AWLERLQADRRALWNYEPWWIDAVERAWPDAWQRILAAGDAPGPLTLRVNARRMTADAYLDTLRAERIDAEKIGLHAIRL
ASARPVERIPGFADGIVSVQDAGAQLSAEWLGARDGMRVLDACAAPGGKTGHILELAHAEVVALESDPARAPRIGENLAR
LSLTADVRVGDAADPAQWHDGRPFDRVLADVPCSASGIVRRHPDIRWLRRAADIPALVAEQRRILSALWPLVKPGGELLY
VTCSIFPEEGELQARWFGDACQDAVRLDAPGQLLPQGATGGAPAVGGSGESGRHVDHDGFFYARFQKR

Specific function: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=400, Percent_Identity=27.75, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI76150623, Length=400, Percent_Identity=27.75, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI32698918, Length=235, Percent_Identity=30.2127659574468, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI2367212, Length=441, Percent_Identity=37.18820861678, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI87081985, Length=224, Percent_Identity=32.1428571428571, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17536757, Length=344, Percent_Identity=28.1976744186047, Blast_Score=103, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324268, Length=340, Percent_Identity=26.1764705882353, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319447, Length=274, Percent_Identity=26.6423357664234, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI22024126, Length=353, Percent_Identity=26.628895184136, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24668781, Length=236, Percent_Identity=32.6271186440678, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356513, Length=236, Percent_Identity=32.6271186440678, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355201, Length=229, Percent_Identity=31.8777292576419, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: =2.1.1.176 [H]

Molecular weight: Translated: 50443; Mature: 50312

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTRPSRSRASGAPARAPRLSALHLVPDSLGFALDGAAQAVDAVDRGAALPAALAAVHA
CCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCHHCHHHHHHHHHHCCCCHHHHHHHHHH
ALPSNAQAASRGAIQDIGYRAMRRRGTADWLIAQLVAKAPPAHVHALLVCAFALLVDDEH
HCCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
AAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRFLRERAAWLERLQADRRALWNYEPW
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WIDAVERAWPDAWQRILAAGDAPGPLTLRVNARRMTADAYLDTLRAERIDAEKIGLHAIR
HHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHEE
LASARPVERIPGFADGIVSVQDAGAQLSAEWLGARDGMRVLDACAAPGGKTGHILELAHA
ECCCCCHHHCCCHHHCCEEHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCC
EVVALESDPARAPRIGENLARLSLTADVRVGDAADPAQWHDGRPFDRVLADVPCSASGIV
EEEEECCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCH
RRHPDIRWLRRAADIPALVAEQRRILSALWPLVKPGGELLYVTCSIFPEEGELQARWFGD
HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCH
ACQDAVRLDAPGQLLPQGATGGAPAVGGSGESGRHVDHDGFFYARFQKR
HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TQTRPSRSRASGAPARAPRLSALHLVPDSLGFALDGAAQAVDAVDRGAALPAALAAVHA
CCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCHHCHHHHHHHHHHCCCCHHHHHHHHHH
ALPSNAQAASRGAIQDIGYRAMRRRGTADWLIAQLVAKAPPAHVHALLVCAFALLVDDEH
HCCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
AAYAPFTVVDQAVTAIGARRECSFAKGLVNAVLRRFLRERAAWLERLQADRRALWNYEPW
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WIDAVERAWPDAWQRILAAGDAPGPLTLRVNARRMTADAYLDTLRAERIDAEKIGLHAIR
HHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHEE
LASARPVERIPGFADGIVSVQDAGAQLSAEWLGARDGMRVLDACAAPGGKTGHILELAHA
ECCCCCHHHCCCHHHCCEEHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCC
EVVALESDPARAPRIGENLARLSLTADVRVGDAADPAQWHDGRPFDRVLADVPCSASGIV
EEEEECCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCH
RRHPDIRWLRRAADIPALVAEQRRILSALWPLVKPGGELLYVTCSIFPEEGELQARWFGD
HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCH
ACQDAVRLDAPGQLLPQGATGGAPAVGGSGESGRHVDHDGFFYARFQKR
HHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA