| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451611
Identifier: 126451611
GI number: 126451611
Start: 1619619
End: 1620296
Strand: Reverse
Name: 126451611
Synonym: BURPS1106A_1665
Alternate gene names: NA
Gene position: 1620296-1619619 (Counterclockwise)
Preceding gene: 126453939
Following gene: 126454044
Centisome position: 40.62
GC content: 63.86
Gene sequence:
>678_bases ATGACCGACCGCCGATCACACCACGATGACGATCTCCTTTCCCTCATCGACGAACTGGAGGCCGAATCCCGAGCGATCGA CGCGCGGATGTCGCACCTCGACGCGCTGGTTTCGTGGCACGACTTCCTGATTTTCGAAGCCGAGAACCTGGCGAAGCTGC AACGCAGTCTGGCCGATATCCGCGAGCAATCCGGGCAGATCCCGCACGCGCCGCACGACGTGCGCCGGTTCCGTCTCGGC CTGCTGTGGATGGGCGCGGTGGCGGCGTACGAAGGCGCGATGCACGAGCTGTTCGTCAACACGCTGCGCGTCGAATCGCT TCGAGCGAAGGCGCTCGATCGCCTGCGGCAGCTGATCCGCGACGGCGCGTCGCCGCACCGAGACATCAAGACCGCCGATG CGCAATCCGTCACGCGCTGGTTCACGCTCACGACGATCGCCGATCCGCTCGTGGCCGCCAAACGCTTCGACACCCTCTAC GGCATCGCCACGATCACGCCGGACCCAGCGTGGTGCCGGCGCGTCCTCGGCATCAGAAACGCGTTTGCGCATCGAAACGG AATCGGCGTCGACATCCGCGAAGAAGCGCTTCACGAATTGATCGACCGCCTCGATGATCTGGCCAGCGAATTTCATTCGG CGTTTCTGCACGAAGCGGGCAAGCTGACCGAAACATGA
Upstream 100 bases:
>100_bases TCGGGCCTGCCGCGCCGATGCCCGCGTCCGCGCGACGGCGACCTCACGCGATTGGCGATACGATGGCCGACCGTCCACCT AGCGAGCTGCGTCCCCGACC
Downstream 100 bases:
>100_bases TCGCTGCCGCCGTCGCCGGCCAAGCCCCATGACGTTCGCATGCGCGGGCGCGCCGGCCTGCGGCCGCTCCGGTCAGAGGA AGACCCGATGCTTCCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTDRRSHHDDDLLSLIDELEAESRAIDARMSHLDALVSWHDFLIFEAENLAKLQRSLADIREQSGQIPHAPHDVRRFRLG LLWMGAVAAYEGAMHELFVNTLRVESLRAKALDRLRQLIRDGASPHRDIKTADAQSVTRWFTLTTIADPLVAAKRFDTLY GIATITPDPAWCRRVLGIRNAFAHRNGIGVDIREEALHELIDRLDDLASEFHSAFLHEAGKLTET
Sequences:
>Translated_225_residues MTDRRSHHDDDLLSLIDELEAESRAIDARMSHLDALVSWHDFLIFEAENLAKLQRSLADIREQSGQIPHAPHDVRRFRLG LLWMGAVAAYEGAMHELFVNTLRVESLRAKALDRLRQLIRDGASPHRDIKTADAQSVTRWFTLTTIADPLVAAKRFDTLY GIATITPDPAWCRRVLGIRNAFAHRNGIGVDIREEALHELIDRLDDLASEFHSAFLHEAGKLTET >Mature_224_residues TDRRSHHDDDLLSLIDELEAESRAIDARMSHLDALVSWHDFLIFEAENLAKLQRSLADIREQSGQIPHAPHDVRRFRLGL LWMGAVAAYEGAMHELFVNTLRVESLRAKALDRLRQLIRDGASPHRDIKTADAQSVTRWFTLTTIADPLVAAKRFDTLYG IATITPDPAWCRRVLGIRNAFAHRNGIGVDIREEALHELIDRLDDLASEFHSAFLHEAGKLTET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25531; Mature: 25400
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRRSHHDDDLLSLIDELEAESRAIDARMSHLDALVSWHDFLIFEAENLAKLQRSLADI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REQSGQIPHAPHDVRRFRLGLLWMGAVAAYEGAMHELFVNTLRVESLRAKALDRLRQLIR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGASPHRDIKTADAQSVTRWFTLTTIADPLVAAKRFDTLYGIATITPDPAWCRRVLGIRN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH AFAHRNGIGVDIREEALHELIDRLDDLASEFHSAFLHEAGKLTET HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDRRSHHDDDLLSLIDELEAESRAIDARMSHLDALVSWHDFLIFEAENLAKLQRSLADI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REQSGQIPHAPHDVRRFRLGLLWMGAVAAYEGAMHELFVNTLRVESLRAKALDRLRQLIR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGASPHRDIKTADAQSVTRWFTLTTIADPLVAAKRFDTLYGIATITPDPAWCRRVLGIRN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH AFAHRNGIGVDIREEALHELIDRLDDLASEFHSAFLHEAGKLTET HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA