Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126451597

Identifier: 126451597

GI number: 126451597

Start: 2015036

End: 2015917

Strand: Direct

Name: 126451597

Synonym: BURPS1106A_2030

Alternate gene names: NA

Gene position: 2015036-2015917 (Clockwise)

Preceding gene: 126452733

Following gene: 126454541

Centisome position: 50.52

GC content: 63.04

Gene sequence:

>882_bases
ATGCACCGTGACTGCCTCCATTGCCCAGCACCGCTGGTCGGCACAAGCTTCAAACCTTGTCACTTTGCGGACATCGTCGA
TAACGGCTTGCAGGACGGCTTCTTCGAGGTGCACGCGGAAAACTACATGGGCAAGGGCGGTCCGCCGCATCGAGCGCTAA
GCGCGCTGCGCGAAACCTATCCGGTTTCCGTGCACGGCGTGTGCCTGTCGATCGGTGGGCCATCGCCGCTCGATGCGCAT
CACCTCGCACGTTTTCGTGATGTCGTCGCGCGCTACGAACCCGTGCTCGTCTCCGAGCATCTTGCGTGGTCATCGCACGG
CGGCGCCTTCTACAATGATCTGCTGCCCTTGCCCTATACGAAAGCGACGCTTGATCGGGTTTGCGCGCACGTCGACCAGA
TTCAGGAGGCGATCGCGCGTCCGCTGCTGCTCGAGAATCCCTCGACCTATGTCGGGTTCGCGTCGTCGACGATGAGCGAA
ACCGAATTTATTGCGGCGGTCGCCGGGCGTACCGGTTGCGGCCTGTTGCTCGACATCAATAACGCGTTCGTGTCGGCGAC
CAATCATGGCTGCTCGGCCGCCGACTATCTCGCAGATTTTCCGCTCGAACAGGTCGGCGAAATCCATCTGGCCGGACACA
GCGAACAACGCGACGACGAGGACGAACCGCTTCTCATCGACAGCCACGATCGCCCGGTTGCCGGCCCCGTATGGGCGTTG
TACGCGAGCGTGATTGCCCGCACAGGGCCGGTGCCGACACTCGTCGAATGGGACAGCCAGCTTCCCGACTGGCCCGTGCT
GCGTGCGCAGGCGCTCGAAGCCCGCCGGATCATGGACGCTGCCGTCGCATCGCCCGTGGAGGTAGCCGATCATGCGCTCT
GA

Upstream 100 bases:

>100_bases
TGGCGGTCACGGCTCGCTCACGCCGCTGAAGTCGTAAAGCGCATCGACAAGAGGAAATCCGGAGGCGCTCATGAGTGATT
CTGTCAGTATTGCGAAATAT

Downstream 100 bases:

>100_bases
TGCTGCCGCTTCCGATTACGCGTGCGCGTTCGCGCCTGGCCTCACGAATCCGTCGATCGGCGCGCCGGACGACGCGATCG
CTCATGGGCACAAGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLSIGGPSPLDAH
HLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSE
TEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDRPVAGPVWAL
YASVIARTGPVPTLVEWDSQLPDWPVLRAQALEARRIMDAAVASPVEVADHAL

Sequences:

>Translated_293_residues
MHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLSIGGPSPLDAH
HLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSE
TEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDRPVAGPVWAL
YASVIARTGPVPTLVEWDSQLPDWPVLRAQALEARRIMDAAVASPVEVADHAL
>Mature_293_residues
MHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLSIGGPSPLDAH
HLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSE
TEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDRPVAGPVWAL
YASVIARTGPVPTLVEWDSQLPDWPVLRAQALEARRIMDAAVASPVEVADHAL

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 31737; Mature: 31737

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETY
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHC
PVSVHGVCLSIGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYT
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHCCCCCCCH
KATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSETEFIAAVAGRTGCGLLLDIN
HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEECC
NAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDRPVAGPVWAL
CEEEECCCCCCCHHHHHHHCCHHHHCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHH
YASVIARTGPVPTLVEWDSQLPDWPVLRAQALEARRIMDAAVASPVEVADHAL
HHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETY
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHC
PVSVHGVCLSIGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYT
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHCCCCCCCH
KATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSETEFIAAVAGRTGCGLLLDIN
HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEECC
NAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDRPVAGPVWAL
CEEEECCCCCCCHHHHHHHCCHHHHCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHH
YASVIARTGPVPTLVEWDSQLPDWPVLRAQALEARRIMDAAVASPVEVADHAL
HHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA