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The map label for this gene is 126451594

Identifier: 126451594

GI number: 126451594

Start: 1329475

End: 1330263

Strand: Direct

Name: 126451594

Synonym: BURPS1106A_1360

Alternate gene names: NA

Gene position: 1329475-1330263 (Clockwise)

Preceding gene: 126452501

Following gene: 126452474

Centisome position: 33.33

GC content: 69.33

Gene sequence:

>789_bases
ATGAGCACGGAACGTCTGTTTTCGATTCGCAACCGCTGGTTGACGGTCAGCGTCGGGCTCACGCTGTTCGCGGTGGTCGC
GTCGGTGCTGATCGGCTTCGTCTGGCTGCCGTCGGTGCAAAAGGATGCGCAGTTCCAGGGCATCTGGAACGCGATCTGCA
GCGCGGCCGGCGTGCCGCGCGCGTGGCTGCCGTCGCAGCAGGAGCCGGTGCCCTCGGCCGTCAGGACGAGCACGGTCGTC
GTCACGCCGCAGATGATGGCGGGCGCGGACAGCCTGTCGATCGGCCGCGGCGCGACGCTCGCGATGCGCTGCACGATGTG
CCACGGCGCACGCGGGATGAGCGACGCGAATTCGCCGAACCTCGCGGGCCAGTACGCGGCCGTCATCTACAAGCAGTTGA
AGGACTTCCAGACGGGCGCGCGCACCAACGCGGTGATGGCGCCGATGGTCGTCAATCTGAGCGACCAGGATATGCGCGAT
CTCGCCGCGTTCTACTCGTACCTGCCGCGCACCGCGACGGCGCTCGCCGCGACGCCGCCGAGGATCGTCGCGAGCGGCGC
GCCGATGCGCAACATCGCGCCGTGCGCGTCGTGCCACGGCGGGATGGACAACAAGGTCGGCGGGCCGAGGCTCGAAGGCG
AGCCGGAGATCTACATCAACGCGCAATTGCAGGCGTTCGCGTCGGGCGCGCGGCACAACGACATCAGCGAGCAGATGCGC
AACGTCGCGCGGCAGATGACGCCCGCCGAGATCGCGGCGGCCGCGCGGTATTACGCGGGGCGGCCGTAG

Upstream 100 bases:

>100_bases
TGATGATCGGCCTCACGGTCGTCAACTACGGCTATCCGATCGCGCAATTGATGTCGCTCAAGCAACCGTCGGTGCCGGCG
ATCTACATGGGGGCGCAGCG

Downstream 100 bases:

>100_bases
CGGGGCGCGGCGCGGGCCTCGAAGGGGCGCCGCGTCGGGCGCCGTCGTGTGGTTGATCGATCGACCGATCGAACGCACGG
TGGTGAAGAAAACGGCAAGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVV
VTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRD
LAAFYSYLPRTATALAATPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
NVARQMTPAEIAAAARYYAGRP

Sequences:

>Translated_262_residues
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVV
VTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRD
LAAFYSYLPRTATALAATPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
NVARQMTPAEIAAAARYYAGRP
>Mature_261_residues
STERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVVV
TPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDL
AAFYSYLPRTATALAATPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMRN
VARQMTPAEIAAAARYYAGRP

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 28021; Mature: 27889

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPR
CCHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
AWLPSQQEPVPSAVRTSTVVVTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPN
CCCCCCCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDLAAFYSYLPRTATALAATPP
CHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHH
NVARQMTPAEIAAAARYYAGRP
HHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPR
CHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
AWLPSQQEPVPSAVRTSTVVVTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPN
CCCCCCCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDLAAFYSYLPRTATALAATPP
CHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHH
NVARQMTPAEIAAAARYYAGRP
HHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA