| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451524
Identifier: 126451524
GI number: 126451524
Start: 1762635
End: 1763633
Strand: Reverse
Name: 126451524
Synonym: BURPS1106A_1801
Alternate gene names: NA
Gene position: 1763633-1762635 (Counterclockwise)
Preceding gene: 126454267
Following gene: 126453854
Centisome position: 44.22
GC content: 66.37
Gene sequence:
>999_bases ATGACAACAAGATTCTCGATCGCGTTCTGGGAGGAATGCATGTCGCACACGTTACCGCTGCACCCGTCTTCGTCGTCGCG AACCCGATTCGCGCGGCGCCGCCTCGCCACCGCGTCGGCCGCGCTCTCGCTCATGCTCGGCCACGGCGCCGCGCATGCGC AGGCCAACGCCGAGGCGTCCGCCGCGGTCGAGTCCGGCGCGCAGGAGGCGGCGCTTCCCGCCGAGCTCGCGAAGGTCGCG AAGCTCCCCGTCGAGCAGCAGGCACGCTGGCTGCGCACGGCCGCGCGCCAGGGCACGCTCGAAAAGCTCGACGACGCGAC GCTCACCGCGCTCTTCAAGTCGCTCGATCCGCAGACCGTGCCGGATTACGTCGCGGCGGGGCCGATCGGCCATCCGTCGT ACGAATTCACGATGCTGCGCCAGGAGCGCATCAGCGGCAAATGGTCGGATACGCCCGATCACATGCTCGTCAAGGTGACG CGCAGCCCGCTGCGCGTCTATGCGAAGTGGCTGCCGGACGGCGCGCACTCCGGCCAGGAAGTGATCTACGATTCCTCCAA GCGCGCCGACGAAATGTACGGCCACTTGGGCGGCCTGCTCGGCAAGGTGCCGATGTGGACGGCCGTCGACGGCACGCTCG CGCGCGCGCAGTCGAACCACCAGGTGCGCGATCTCGGCACCGAGTTCGTCGCGAACCTGTATCTGACCGAGGCGAAGAAG TACCGCGAAGCGGGCGCGCTGAAGCCGACGCACGTCGAGGCGAAGACAGTCAAGGGGGTGCGCGTCGTCGCCCTCACCTA CGAGACGCCCGGCGGCCGGCCGCAGTTCTACGCGAAAAAGGAAACGCTCGGGCTCGATCTGCGGCAGCCATATTTCCGCA CCGTCGAGTCGTACGACAACGACGGGCGCGTGTTCGAGAAAATCGTGTTCGAGAAGATCACGCCGAAATCGCTCGACGAA ACGGCGTTCGATCCGAAGAATCCCGATTACAAATTCTGA
Upstream 100 bases:
>100_bases AGATCCTGCGCCGCGCGCTGCGCGACGAGGAACTCGCGAAGCTCGCGAACGCGCCCGCCGATCCGCACGCGAAGCACTGA TCCGGGCGAACCGCGCAAGC
Downstream 100 bases:
>100_bases GACAAATTCTGAGCGGTCATCGTCGCGTCATGCTCGGCGCGCGTGACCGGCGCGCCGGCGACGCCGTCGGGCGGCGATGA AAAACGCCGCGCGGCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEAALPAELAKVA KLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVT RSPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK YREAGALKPTHVEAKTVKGVRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDE TAFDPKNPDYKF
Sequences:
>Translated_332_residues MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEAALPAELAKVA KLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVT RSPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK YREAGALKPTHVEAKTVKGVRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDE TAFDPKNPDYKF >Mature_331_residues TTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEASAAVESGAQEAALPAELAKVAK LPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTVPDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTR SPLRVYAKWLPDGAHSGQEVIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKKY REAGALKPTHVEAKTVKGVRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDNDGRVFEKIVFEKITPKSLDET AFDPKNPDYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36795; Mature: 36664
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEAS CCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH AAVESGAQEAALPAELAKVAKLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTV HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC PDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTRSPLRVYAKWLPDGAHSGQE CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC VIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK EEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YREAGALKPTHVEAKTVKGVRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDN HHHHCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEECHHHCCCCCCCHHHHHHHCCCC DGRVFEKIVFEKITPKSLDETAFDPKNPDYKF CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRFSIAFWEECMSHTLPLHPSSSSRTRFARRRLATASAALSLMLGHGAAHAQANAEAS CCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH AAVESGAQEAALPAELAKVAKLPVEQQARWLRTAARQGTLEKLDDATLTALFKSLDPQTV HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC PDYVAAGPIGHPSYEFTMLRQERISGKWSDTPDHMLVKVTRSPLRVYAKWLPDGAHSGQE CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCC VIYDSSKRADEMYGHLGGLLGKVPMWTAVDGTLARAQSNHQVRDLGTEFVANLYLTEAKK EEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YREAGALKPTHVEAKTVKGVRVVALTYETPGGRPQFYAKKETLGLDLRQPYFRTVESYDN HHHHCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEECHHHCCCCCCCHHHHHHHCCCC DGRVFEKIVFEKITPKSLDETAFDPKNPDYKF CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA