| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is metK [H]
Identifier: 126451461
GI number: 126451461
Start: 199179
End: 200366
Strand: Direct
Name: metK [H]
Synonym: BURPS1106A_0211
Alternate gene names: 126451461
Gene position: 199179-200366 (Clockwise)
Preceding gene: 126452974
Following gene: 126454571
Centisome position: 4.99
GC content: 67.09
Gene sequence:
>1188_bases GTGGCAAACGATTATCTCTTCACGTCCGAATCCGTTTCCGAAGGCCATCCGGACAAGGTCGCCGACCAAATCTCCGACGC GATCCTCGACGCAATCCTCGCGCAAGACAAGTACTCCCGTGTCGCGGCCGAAACGCTGTGCAACACCGGTCTCGTCGTGC TCGCCGGCGAAATCACGACCACGGCGAACATCGACTACATCCAGATCGCGCGCGACACGATCAAGCGCATCGGCTACGAC AATACCGATTACGGCATCGACTACCGCGGCTGCGCGGTGCTCGTCGCGTACGACAAGCAGTCGCCGGACATCGCGCAAGG CGTCGACCGCGCGCACGACAACAACCTCGATCAGGGCGCGGGCGATCAGGGCCTGATGTTCGGCTACGCGTGCGACGAAA CGCCCGAGCTGATGCCGCTGCCGATCCACCTGTCGCACCGGCTCGTCGAGCGCCAGGCGAACCTGCGCCGCGACGGCCGC CTGCCGTGGCTGCGCCCGGACGCGAAGTCACAGGTGACGGTGCGCTACGTCGACGGCAAGCCGCACTCGATCGACACCGT CGTGCTATCGACGCAGCACGCGCCGGAGATCGATCTGCCCGCGCTGCGCGAAGCGGTGATCGAAGAGGTCATCAAGCCGA CGCTGCCCGCCGACCTGATCAAGGGCGACATCAAGTTCCTCGTGAACCCGACCGGCCGCTTCGTGATCGGCGGCCCGCAA GGCGATTGCGGGCTGACCGGCCGCAAGATCATCGTCGACACCTACGGCGGCGCGGCGCCGCACGGCGGCGGCGCGTTCTC GGGCAAGGATCCGTCGAAGGTCGACCGCTCGGCCGCCTACGCGGGCCGCTACGTCGCGAAGAACATCGTCGCCGCGGGCC TCGCGTCGCGCGCGCTGATTCAGGTGTCGTACGCGATCGGCGTGGCCGAGCCGACCTCGGTGATGGTCAACACGTTCGGC ACGGGCCGCGTGTCCGACGAGACGATCACGAAGCTCGTGCGCGAGCACTTCGACCTGCGTCCGAAGGGCATCATCCAGAT GCTCGACCTGCTGCGCCCGATCTACGAGAAGACCGCCGCTTACGGCCACTTCGGCCGCGAAGAACCGGAGTTCTCGTGGG AAGCCGCCGACAAGGCGCTCGCGCTCGCCGAAGCGGCGGGCGTCGAGCCGGCCGTGCAAGTGGCCTGA
Upstream 100 bases:
>100_bases GCACCCACGGCGCAGGAAATCCGCTAAAGCGTCGCCACTTCGGGCCTCTGGAAGCTGGCTACGTGAACTCAACCGTAACC AAAAACAGGAGCCTGAGAAC
Downstream 100 bases:
>100_bases CGCACGCGCGTGCTCGCGCGCAAACAAAAACCCCGGCTTCGGCCGGGGTTTTTTCATTTCAATGGTGCGTCGGATGCGGC TCGCATGGCGCATCGGCGGC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGR LPWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFSWEAADKALALAEAAGVEPAVQVA
Sequences:
>Translated_395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGR LPWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFSWEAADKALALAEAAGVEPAVQVA >Mature_394_residues ANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDN TDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRL PWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQG DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGT GRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGREEPEFSWEAADKALALAEAAGVEPAVQVA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=58.6842105263158, Blast_Score=428, Evalue=1e-120, Organism=Homo sapiens, GI5174529, Length=380, Percent_Identity=57.3684210526316, Blast_Score=422, Evalue=1e-118, Organism=Escherichia coli, GI1789311, Length=385, Percent_Identity=69.8701298701299, Blast_Score=539, Evalue=1e-154, Organism=Caenorhabditis elegans, GI17538498, Length=376, Percent_Identity=58.7765957446808, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI25145633, Length=380, Percent_Identity=58.421052631579, Blast_Score=425, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=58.2446808510638, Blast_Score=424, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17551082, Length=389, Percent_Identity=55.7840616966581, Blast_Score=419, Evalue=1e-117, Organism=Caenorhabditis elegans, GI32565911, Length=328, Percent_Identity=57.3170731707317, Blast_Score=358, Evalue=2e-99, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=52.9255319148936, Blast_Score=358, Evalue=3e-99, Organism=Caenorhabditis elegans, GI25145635, Length=332, Percent_Identity=56.6265060240964, Blast_Score=355, Evalue=3e-98, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=57.1428571428571, Blast_Score=319, Evalue=1e-87, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=58.3333333333333, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320710, Length=379, Percent_Identity=58.5751978891821, Blast_Score=434, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6323209, Length=378, Percent_Identity=59.2592592592593, Blast_Score=431, Evalue=1e-122, Organism=Drosophila melanogaster, GI45552159, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580529, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580537, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580533, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580535, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580531, Length=378, Percent_Identity=54.7619047619048, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580527, Length=376, Percent_Identity=54.2553191489362, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580525, Length=376, Percent_Identity=54.2553191489362, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580541, Length=377, Percent_Identity=51.9893899204244, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=53.781512605042, Blast_Score=132, Evalue=6e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42642; Mature: 42510
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEAADKALALAEAAGVEPAVQVA HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure ANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITT CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEAADKALALAEAAGVEPAVQVA HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA