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The map label for this gene is acdS

Identifier: 126447963

GI number: 126447963

Start: 1351306

End: 1352322

Strand: Reverse

Name: acdS

Synonym: BMA10247_A1385

Alternate gene names: 126447963

Gene position: 1352322-1351306 (Counterclockwise)

Preceding gene: 126445931

Following gene: 126447494

Centisome position: 57.48

GC content: 67.45

Gene sequence:

>1017_bases
ATGAATCTCCAGAAATTTTCGCGTTATCCGCTGACCTTCGGCCCGACGCCGATCCAGCCGCTCAAGCGGCTTTCCGCGCA
TCTCGGCGGCAAGGTCGAGCTGTACGCGAAGCGCGACGACTGCAACAGCGGCCTCGCGTTCGGCGGCAACAAGACGCGCA
AGCTCGAATACCTGATCCCGGACGCGCTCGCGCAAGGCTGCGACACGCTCGTGTCGATCGGCGGCATCCAGTCGAACCAG
ACGCGCCAGGTCGCGGCGGTGGCCGCGCATCTCGGCATGAAGTGCGTGCTCGTGCAGGAGAACTGGGTCAACTATCACGA
CGCCGTCTACGATCGCGTCGGCAACATCCAGATGTCGCGCATGATGGGCGCCGACGTGCGCCTCGTGCCGGACGGCTTCG
ACATCGGCTTTCGCAAGAGCTGGGAGGACGCGCTCGCCGATGTCCGCGCGAGGGGCGGCAAGCCGTATGCGATTCCGGCC
GGCTGCTCCGACCATCCGCTCGGCGGCCTCGGCTTCGTCGGCTTTGCCGAGGAAGTGCGCGCGCAGGAGGCCGAGCTCGG
TTTCCAATTCGATTACGTCGTGGTGTGCTCGGTGACGGGCAGCACGCAGGCCGGGATGGTCGTCGGCTTCGCGGCGGACG
GGCGCGCGGACCGCGTGATCGGCGTCGACGCGTCGGCGAAGCCCGCGCAGACGCGCGAGCAGATCCTTCGGATCGCGAAG
CATACCGCCGATCGCGTCGAGCTGGGCCGCGACATCACGAGCGCCGACGTCGTGCTCGACGAGCGCTTCGGCGGCCCCGA
GTACGGGCTGCCGAACGAGGGCACGCTCGAGGCGATCCGGCTGTGCGCGAAGCTCGAAGGCGTGCTGACCGATCCCGTCT
ACGAAGGCAAGTCGATGCACGGGATGATCGAGAAGGTGCGGCTCGGCGAATTCCCGGCCGGCTCGAAGGTGCTGTACGCG
CATCTCGGCGGCGTGCCCGCGCTGAACGCGTACAGCTTTTTGTTCCGCGACGGCTGA

Upstream 100 bases:

>100_bases
ATCGTTTTTAACATGAGGCATCGCTGCGGCCGCGATCGAACGGTGCGATGCCCGGCCCGATGCGCCCGCGCGACCGAACC
TTCGACGACAGGAGCGACCG

Downstream 100 bases:

>100_bases
CGTCGCGCGGCGCTTGCTGATCGACGCCGGGTATTGACGCCGTCGAACTCGTCGGGTCCATCCGCGCGGCGAGGCGACGT
ATCGATGACGTATCGGCGTC

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: ACC deaminase; ACCD

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNLQKFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQ
TRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPA
GCSDHPLGGLGFVGFAEEVRAQEAELGFQFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQILRIAK
HTADRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYA
HLGGVPALNAYSFLFRDG

Sequences:

>Translated_338_residues
MNLQKFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQ
TRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPA
GCSDHPLGGLGFVGFAEEVRAQEAELGFQFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQILRIAK
HTADRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYA
HLGGVPALNAYSFLFRDG
>Mature_338_residues
MNLQKFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQ
TRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPA
GCSDHPLGGLGFVGFAEEVRAQEAELGFQFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQILRIAK
HTADRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYA
HLGGVPALNAYSFLFRDG

Specific function: Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family

Homologues:

Organism=Escherichia coli, GI87082000, Length=330, Percent_Identity=38.7878787878788, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 1A1D_BURM7 (A3ME84)

Other databases:

- EMBL:   CP000547
- RefSeq:   YP_001078570.1
- ProteinModelPortal:   A3ME84
- SMR:   A3ME84
- GeneID:   4889760
- GenomeReviews:   CP000547_GR
- KEGG:   bmn:BMA10247_A1385
- TIGR:   BMA10247_A1385
- HOGENOM:   HBG689308
- OMA:   DIGIRPS
- ProtClustDB:   PRK12390
- BioCyc:   BMAL320389:BMA10247_A1385-MONOMER
- HAMAP:   MF_00807
- InterPro:   IPR005965
- InterPro:   IPR020601
- InterPro:   IPR001926
- TIGRFAMs:   TIGR01274

Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu

EC number: =3.5.99.7

Molecular weight: Translated: 36481; Mature: 36481

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: ACT_SITE 78-78

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQKFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIP
CCCCHHCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCEEEEEECC
DALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEHH
MMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVR
HCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
AQEAELGFQFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQILRIAK
HHHHHCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHH
HTADRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMH
HHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCHHH
GMIEKVRLGEFPAGSKVLYAHLGGVPALNAYSFLFRDG
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNLQKFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIP
CCCCHHCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCEEEEEECC
DALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEHH
MMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVR
HCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
AQEAELGFQFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQILRIAK
HHHHHCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHH
HTADRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMH
HHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCHHH
GMIEKVRLGEFPAGSKVLYAHLGGVPALNAYSFLFRDG
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA