| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is trpF [H]
Identifier: 126447841
GI number: 126447841
Start: 475241
End: 476002
Strand: Direct
Name: trpF [H]
Synonym: BMA10247_A0528
Alternate gene names: 126447841
Gene position: 475241-476002 (Clockwise)
Preceding gene: 126446203
Following gene: 126446869
Centisome position: 20.2
GC content: 71.65
Gene sequence:
>762_bases ATGACCGATACACCCGATGCGACCCTTCCGGCCGACGCGCCGCCGAACGACGCGCCCGCCGCCGGCGCGCGCCGCGACAC GGGCGGCGACGGGAGTCGCGACGCGCCGCCGCCGCGCACGCGGATCAAGCTCTGCGGGTTGTCGAACGCGGCCGATATCG ACTGGGCGGCCGAGCTCGGCGCCGATGCGATCGGCCTCGTGTTCTACCCGAAGAGCCCGCGCGCGGTGACGCTCGAGCAG GCGGCCGCGCTCGCCGCACGCGTGCCGCCGTTCGTATCGGTGGTCGGCCTGTTCGTGAACCCGACCGAGGACGAGATCGC CCGCGTCGCGAACGCGGTGCCGCTCACGCTGCTGCAATTCCATGGCGACGAGACGCCCGGGCAGTGCGCGTCGCTCGCGG CGGCGGCGCGCCTGCCTTGGCTGCGCGCGTTGCGCGTGGGCGTGGCGACGCAGCCGGCCGATTTGGTAGAATCGGCACTT CACTATCCGGCAGCCCGCGGCCTGTTGTTCGACACCCTCGTCGAGCACTACGGCGGCAGCGGCAAGGTCTTCGATTGGTC ACTTATCCCAGCAGAGCTCGCGCGTCGGGCCGTTTTGAGTGGTGGGTTGAACGCGCAAAACGTCGGTGACGCGATCCGTC AGGTGCGTCCGTTCGCGGTCGATGTCTCGAGCGGCATCGAAGCGCCGGGCGCGAAGGGCGTGAAGGATCGCGCCCGCATG GCGGCGTTCGTGCGCGCGGTGCGCGAGGCGGACGCCGGGTGA
Upstream 100 bases:
>100_bases TCGCGCACGTCGGCTATCCGGCCGAATTCGCGGTGCCGCCCGCACAGCTCGGCAGCGTGCCGTGGAGCAGCGTGTGGGCC GATCTGGACGGACGAACATG
Downstream 100 bases:
>100_bases TGCCAGTCCGCGCGGCGGGCGCCGGGAATCGAGAGCCCGGCGCGCCGCGTGGTCGAACCGAGAGTGACGTCATGTATAAC CTTCCCGATGATCGCGGCCA
Product: N-(5'-phosphoribosyl)anthranilate isomerase
Products: NA
Alternate protein names: PRAI [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTDTPDATLPADAPPNDAPAAGARRDTGGDGSRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQ AAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESAL HYPAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM AAFVRAVREADAG
Sequences:
>Translated_253_residues MTDTPDATLPADAPPNDAPAAGARRDTGGDGSRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQ AAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESAL HYPAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM AAFVRAVREADAG >Mature_252_residues TDTPDATLPADAPPNDAPAAGARRDTGGDGSRDAPPPRTRIKLCGLSNAADIDWAAELGADAIGLVFYPKSPRAVTLEQA AALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQFHGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALH YPAARGLLFDTLVEHYGGSGKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARMA AFVRAVREADAG
Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family [H]
Homologues:
Organism=Escherichia coli, GI87081863, Length=208, Percent_Identity=32.2115384615385, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320210, Length=227, Percent_Identity=28.1938325991189, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 [H]
Pfam domain/function: PF00697 PRAI [H]
EC number: =5.3.1.24 [H]
Molecular weight: Translated: 26285; Mature: 26154
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPDATLPADAPPNDAPAAGARRDTGGDGSRDAPPPRTRIKLCGLSNAADIDWAAELG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCC ADAIGLVFYPKSPRAVTLEQAAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQF CCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHEE HGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALHYPAARGLLFDTLVEHYGGS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC GKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM CCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH AAFVRAVREADAG HHHHHHHHHHCCC >Mature Secondary Structure TDTPDATLPADAPPNDAPAAGARRDTGGDGSRDAPPPRTRIKLCGLSNAADIDWAAELG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCC ADAIGLVFYPKSPRAVTLEQAAALAARVPPFVSVVGLFVNPTEDEIARVANAVPLTLLQF CCEEEEEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHEE HGDETPGQCASLAAAARLPWLRALRVGVATQPADLVESALHYPAARGLLFDTLVEHYGGS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC GKVFDWSLIPAELARRAVLSGGLNAQNVGDAIRQVRPFAVDVSSGIEAPGAKGVKDRARM CCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH AAFVRAVREADAG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA