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The map label for this gene is basJ [H]

Identifier: 126447771

GI number: 126447771

Start: 679115

End: 680065

Strand: Reverse

Name: basJ [H]

Synonym: BMA10247_A0733

Alternate gene names: 126447771

Gene position: 680065-679115 (Counterclockwise)

Preceding gene: 126445643

Following gene: 126447233

Centisome position: 28.91

GC content: 71.29

Gene sequence:

>951_bases
ATGAAGCGATTCGTCTCTTTCTCGCTGCTGCCGGCGCTGCTGCTGCTCGCCGCATGCAACCAGCAGGAGTTGCTGAAGAA
CCTGACCGAGCAGCAGGCGAACGACGTCGTCGCGGTGCTCCAGGCGCACGATCTCGCCGTGCGCAAGGAGGACCTCGGCA
AGACCGGCTATGCGGTGAGCGTCGAGCAGGCCGACTTTCCGACCGCCGTCGATCTGCTGCGGCAATACAACCTGCCGTCG
CAGGCGCGCGTGCAGATCGCGCAGGCGTTTCCCGCCGACTCGCTCGTCGCGTCGCCGCAGGCCGAGCAGGCGAGGTTGCT
GTCGGCCGTCGAGCAGCGCCTCGAGCAGAATCTCGCCGCGCTGCAGAACGTCGTGAGCGCGCGCGTGCAGGTGAGCTATC
CGCTCAAGCCCTCCGACAGCGGCAAGCCAGACGCGCGGATGCACGTGGCCGCCCTGCTCACCTATCGCAACGACGTGAAC
GCGGACATCCTCGTGAGCGAAGTGAAGCGGTTCGTGAAGAACAGCTTCACGAACATCGATTACGACGACATCTCGGTGAT
CCTGTATCGCGCGCCGTCGCTGTTCCGAGGCGCACCGACGATGCCCGCGTCGCATGCGGGCGGCGCGTGGCTCGCCTGGC
TCGCGGCGATTCCGGTCGCGCTCGCGGCCGCCGCCGCGGGCGGGCTCGCCTACCTGCGCCGCCGGCGCGCCGGCGGCCCC
GATACGCCGGCTCGCGCGGCGCCGCGCGCCGAACCCGCGGCGCCGGCCGGCCCCGATGCACGCGAGACGACCGAGGTGCC
GCCCCCGGGTGACGCATTCGACATATCCGATGCATCGGACGCCTTCGATGCATCCGGCACGTCCGCCTCGCCCGGCGCGT
CGGCCGCGGACGCCGCTGCGGCCGACGCGCCGGGCGCATCGCGCGGCGCGCCGTGGGAGCCGCGCCGATGA

Upstream 100 bases:

>100_bases
ACGGAGCTGTCCGACTACAGCATCTACGTCTCGCTTGCGAGCACGCTCGCGCGCAAGGCCGTCTCGGCGGTGGAGACGCT
CGTCAAGGCGCAATGACGCG

Downstream 100 bases:

>100_bases
ATCCGCTCGCGTTGATGCGCGTGATGTACGGCCCGCTCGGCTACGCGCACCCGGATCATCGGACGATCGCCGGCGTCGAT
CTCGCGCGCATGCCCGCCGA

Product: type III secretion system BasJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKRFVSFSLLPALLLLAACNQQELLKNLTEQQANDVVAVLQAHDLAVRKEDLGKTGYAVSVEQADFPTAVDLLRQYNLPS
QARVQIAQAFPADSLVASPQAEQARLLSAVEQRLEQNLAALQNVVSARVQVSYPLKPSDSGKPDARMHVAALLTYRNDVN
ADILVSEVKRFVKNSFTNIDYDDISVILYRAPSLFRGAPTMPASHAGGAWLAWLAAIPVALAAAAAGGLAYLRRRRAGGP
DTPARAAPRAEPAAPAGPDARETTEVPPPGDAFDISDASDAFDASGTSASPGASAADAAAADAPGASRGAPWEPRR

Sequences:

>Translated_316_residues
MKRFVSFSLLPALLLLAACNQQELLKNLTEQQANDVVAVLQAHDLAVRKEDLGKTGYAVSVEQADFPTAVDLLRQYNLPS
QARVQIAQAFPADSLVASPQAEQARLLSAVEQRLEQNLAALQNVVSARVQVSYPLKPSDSGKPDARMHVAALLTYRNDVN
ADILVSEVKRFVKNSFTNIDYDDISVILYRAPSLFRGAPTMPASHAGGAWLAWLAAIPVALAAAAAGGLAYLRRRRAGGP
DTPARAAPRAEPAAPAGPDARETTEVPPPGDAFDISDASDAFDASGTSASPGASAADAAAADAPGASRGAPWEPRR
>Mature_316_residues
MKRFVSFSLLPALLLLAACNQQELLKNLTEQQANDVVAVLQAHDLAVRKEDLGKTGYAVSVEQADFPTAVDLLRQYNLPS
QARVQIAQAFPADSLVASPQAEQARLLSAVEQRLEQNLAALQNVVSARVQVSYPLKPSDSGKPDARMHVAALLTYRNDVN
ADILVSEVKRFVKNSFTNIDYDDISVILYRAPSLFRGAPTMPASHAGGAWLAWLAAIPVALAAAAAGGLAYLRRRRAGGP
DTPARAAPRAEPAAPAGPDARETTEVPPPGDAFDISDASDAFDASGTSASPGASAADAAAADAPGASRGAPWEPRR

Specific function: Required for invasion of epithelial cells. Could be involved in protein secretion [H]

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 33283; Mature: 33283

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVSFSLLPALLLLAACNQQELLKNLTEQQANDVVAVLQAHDLAVRKEDLGKTGYAVS
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VEQADFPTAVDLLRQYNLPSQARVQIAQAFPADSLVASPQAEQARLLSAVEQRLEQNLAA
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LQNVVSARVQVSYPLKPSDSGKPDARMHVAALLTYRNDVNADILVSEVKRFVKNSFTNID
HHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
YDDISVILYRAPSLFRGAPTMPASHAGGAWLAWLAAIPVALAAAAAGGLAYLRRRRAGGP
HHHHEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTPARAAPRAEPAAPAGPDARETTEVPPPGDAFDISDASDAFDASGTSASPGASAADAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
ADAPGASRGAPWEPRR
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRFVSFSLLPALLLLAACNQQELLKNLTEQQANDVVAVLQAHDLAVRKEDLGKTGYAVS
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VEQADFPTAVDLLRQYNLPSQARVQIAQAFPADSLVASPQAEQARLLSAVEQRLEQNLAA
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LQNVVSARVQVSYPLKPSDSGKPDARMHVAALLTYRNDVNADILVSEVKRFVKNSFTNID
HHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
YDDISVILYRAPSLFRGAPTMPASHAGGAWLAWLAAIPVALAAAAAGGLAYLRRRRAGGP
HHHHEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTPARAAPRAEPAAPAGPDARETTEVPPPGDAFDISDASDAFDASGTSASPGASAADAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
ADAPGASRGAPWEPRR
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7476203; 11677609 [H]