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The map label for this gene is 126447646

Identifier: 126447646

GI number: 126447646

Start: 1556824

End: 1557615

Strand: Direct

Name: 126447646

Synonym: BMA10247_A1617

Alternate gene names: NA

Gene position: 1556824-1557615 (Clockwise)

Preceding gene: 262192870

Following gene: 126445628

Centisome position: 66.17

GC content: 64.9

Gene sequence:

>792_bases
ATGAACGACGCCGCGCAAGCCGATTTTCTGCCGATCGACAGGCGCGACGCGCTGTCGTACGAAGCGTTCGTCGAACAGTA
CGCGCTGCCGGGCAAGCCGGTCGTGCTCACGGGCCTCATGCGCGACTGGGAGGCCGCGCGCGTGTGGAATTTCGAGTACT
TCAGGCGCCGTCACGGCCACGTGACGATCGTCGCCCGGCGCTCCGACGACTACGAACGCACCATCACGCTGCCGCTCGCC
GATTACCTCGACCGCCTCGACGATCCGGACGCGCATTTCTATCTGAAAGACTGGGTATTCGAGAACGACATCCCGGAGCT
GCGCGCGCAGTACCGGGTTCCGCGCCACTTCGCGAACTGGGCGACGCGCGTTCCGGGCAAGTGGCAACCGAAATGGCGCT
GGCTGTATATCGGCCCGGCGTCGTCGGCGTCGCACCTGCACGTCGATTTCCTGCTGACGAGCGCCTGGAACGCGCTGTTC
GTCGGCGCCAAGCGGTGGCTCGCGTATTCGCCGGATCAGGCGCGGCGCATGTACCGCGGAGCGGTCGACGCGTTTCACCC
CGACCTCGAGCGGTTTCCGGAGTTCGCGCACGCGCGCGCGCGCATGCACGTGCAGCGGCCCGGAGAAATCATGTACATGC
CGGCAACGTGGTGGCACGCGGTCAGAAACGAGGAGCCGAGCCTCGCGCTATCGGAGAACTTCATCAATGCCGTCAACGCG
CGGTATTTTCTGAAGCCTCGCGTGATCGCGCGGTTCCTTCGTTATGCGGATCATCCGCTTTGGGTCAAGTAG

Upstream 100 bases:

>100_bases
TCGGTCAGACGGCCGCTCGCATCCGTCGACGTCGTTCGCGCGAGCGCGGCGCGCGCGCACGGCGCTTCGTCGATCGCGAC
CGCCGCGAACATCGCGTGAC

Downstream 100 bases:

>100_bases
CGCATGCGCCGTTCGCGTGCGGCTCGCCGATCGGCGCGGCCGCGCGACGCGGACATCGCGCGCCCCCGTGCGCGACGCGC
GCGCGCGCCGGGAGCCGCCG

Product: JmjC domain-containing protein

Products: NA

Alternate protein names: Transcription Factor Jumonji JmjC Domain Protein; JmjC Domain-Containing Protein; Transcription Factor Jumonji Jmjc DomaiN-Containing Protein; JmjC Domain Protein; Transcription Factor Jumonji Domain-Containing Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNDAAQADFLPIDRRDALSYEAFVEQYALPGKPVVLTGLMRDWEAARVWNFEYFRRRHGHVTIVARRSDDYERTITLPLA
DYLDRLDDPDAHFYLKDWVFENDIPELRAQYRVPRHFANWATRVPGKWQPKWRWLYIGPASSASHLHVDFLLTSAWNALF
VGAKRWLAYSPDQARRMYRGAVDAFHPDLERFPEFAHARARMHVQRPGEIMYMPATWWHAVRNEEPSLALSENFINAVNA
RYFLKPRVIARFLRYADHPLWVK

Sequences:

>Translated_263_residues
MNDAAQADFLPIDRRDALSYEAFVEQYALPGKPVVLTGLMRDWEAARVWNFEYFRRRHGHVTIVARRSDDYERTITLPLA
DYLDRLDDPDAHFYLKDWVFENDIPELRAQYRVPRHFANWATRVPGKWQPKWRWLYIGPASSASHLHVDFLLTSAWNALF
VGAKRWLAYSPDQARRMYRGAVDAFHPDLERFPEFAHARARMHVQRPGEIMYMPATWWHAVRNEEPSLALSENFINAVNA
RYFLKPRVIARFLRYADHPLWVK
>Mature_263_residues
MNDAAQADFLPIDRRDALSYEAFVEQYALPGKPVVLTGLMRDWEAARVWNFEYFRRRHGHVTIVARRSDDYERTITLPLA
DYLDRLDDPDAHFYLKDWVFENDIPELRAQYRVPRHFANWATRVPGKWQPKWRWLYIGPASSASHLHVDFLLTSAWNALF
VGAKRWLAYSPDQARRMYRGAVDAFHPDLERFPEFAHARARMHVQRPGEIMYMPATWWHAVRNEEPSLALSENFINAVNA
RYFLKPRVIARFLRYADHPLWVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI125988389, Length=264, Percent_Identity=29.1666666666667, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI125988395, Length=264, Percent_Identity=29.1666666666667, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI223942014, Length=232, Percent_Identity=28.8793103448276, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI223942018, Length=232, Percent_Identity=28.8793103448276, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI239788849, Length=261, Percent_Identity=25.6704980842912, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI239788847, Length=261, Percent_Identity=25.6704980842912, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115532840, Length=267, Percent_Identity=28.4644194756554, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI115545382, Length=233, Percent_Identity=26.1802575107296, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI115532842, Length=196, Percent_Identity=29.5918367346939, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21355815, Length=238, Percent_Identity=26.0504201680672, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19921472, Length=277, Percent_Identity=23.4657039711191, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281365404, Length=244, Percent_Identity=26.6393442622951, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31200; Mature: 31200

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAAQADFLPIDRRDALSYEAFVEQYALPGKPVVLTGLMRDWEAARVWNFEYFRRRHGH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHEECHHHHHHCCCC
VTIVARRSDDYERTITLPLADYLDRLDDPDAHFYLKDWVFENDIPELRAQYRVPRHFANW
EEEEEECCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEHEECCCCHHHHHHHCCCHHHHHH
ATRVPGKWQPKWRWLYIGPASSASHLHVDFLLTSAWNALFVGAKRWLAYSPDQARRMYRG
HHCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
AVDAFHPDLERFPEFAHARARMHVQRPGEIMYMPATWWHAVRNEEPSLALSENFINAVNA
HHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHCCCCCCEEHHHHHHHHHCC
RYFLKPRVIARFLRYADHPLWVK
EEEECHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNDAAQADFLPIDRRDALSYEAFVEQYALPGKPVVLTGLMRDWEAARVWNFEYFRRRHGH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHEECHHHHHHCCCC
VTIVARRSDDYERTITLPLADYLDRLDDPDAHFYLKDWVFENDIPELRAQYRVPRHFANW
EEEEEECCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEHEECCCCHHHHHHHCCCHHHHHH
ATRVPGKWQPKWRWLYIGPASSASHLHVDFLLTSAWNALFVGAKRWLAYSPDQARRMYRG
HHCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
AVDAFHPDLERFPEFAHARARMHVQRPGEIMYMPATWWHAVRNEEPSLALSENFINAVNA
HHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHCCCCCCEEHHHHHHHHHCC
RYFLKPRVIARFLRYADHPLWVK
EEEECHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA