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The map label for this gene is ttuB [H]

Identifier: 126447636

GI number: 126447636

Start: 1354154

End: 1356409

Strand: Reverse

Name: ttuB [H]

Synonym: BMA10247_A1389

Alternate gene names: 126447636

Gene position: 1356409-1354154 (Counterclockwise)

Preceding gene: 126446088

Following gene: 126446968

Centisome position: 57.65

GC content: 71.5

Gene sequence:

>2256_bases
GTGGACGAAACCTCAATCCGCGAACGGGCGGTCATGGCGAAGATCGCGCGGCGGCTGATGCCGCTGCTCGTCATCATGTT
CCTGATCGCGTTCATCGACCGGCAGAACGTCGGTTTCGCGAAGCTGCAGATGGTCCACGCGCTTGGGATGACCGAGACGT
CGTACGGGCTCGGCGCGTCGCTGTTCTTCATCGGCTACCTGCTGTTCGAGGTGCCGAGCACGCTCGCGCTGCATCGGTTC
GGCGCGCGCCTCTGGCTCGCGCGCATCATGATGACGTGGGGGGTGATCACGGTGCTGCTCGGCTTCACGCATTCGACGGG
CGTCTTCTACGTATTCCGCTTTCTGCTCGGCGTCGCGGAAGCCGGCTTCTATCCGGGAGTCATCTATTACCTGACGCTGT
GGTTTCCGCAAAGCCACCGCACGCGCGTGCTCGGCCTCTTCACGCTCGGCAGCGCGCTCGCGAACATGCTCGGCTCGCTC
GCGGGCGGGCTGCTGCTGTCGCTCGACGGCCGGCTCGGGCTCGCCGGCTGGCAGTGGGTATTCGTCGCGACGGGGCTGCC
CGCCATCGCCGTCGCGCTCGTCGCATGGCGTTACTTGCCGGAATCGGTCGAGCGCGCGACGTTCCTGTCCGACGACGAGA
AGCGCGTCGCGCTCGCCGCGCTCAAGCGTGAGGCGTCGCCCGAGGCGGTGTCCGAATCGCCGTGGCGCGCGCTCGTCGAT
CCGCGCGTGCTGATGTTCGCGCTCGCGTACATGCTGATGTCGACGTCGCTGTACGGCGTCACGTACTGGCTGCCGACGCT
GTTGAAGAGCAACGGCGTGCCGTCGTCGCTGAACGGGCTGCTGAACATGATTCCCTGGGCGATCGCGGCGCTGCTGCTGC
TGTGGCTGCCCGCGCGGCTCAAGCGCGAGCGGATCGTGCTCAAGGCGATGGCGGCCGTCGCGGGCGTCGGCGTGGCGGGC
TTCGCGCTCAGTCTCGCGCTGCCCGGCCTGCCTCTGCGCTTCGCCGCGCTCGTGCTGGGCGGCGCGTGCATTCGGCTGCT
GTATCCGTGCTTCTGGTCGCTGCCGCCGCGCTTTTTCTCCGGCGCGCGCGCCGCGGCGAGCATCGCCGCGATCAACTCGA
TCGGCAATCTCGGCGGATTTTTCGCGCAGAACCTGATGCCGTACGTCGGCAAGGCGGCGGGCAGCGCCGGCGCGCCGATG
CTCGTGCCTGTCGTGTGCCTGGCGGCGCTCGGCGTGGGCATGCTCGCCGCCGCGTCGATGGCCGGCCGGCGGCGGCCGGC
ATGGCGGCCTGACGAACGCCGGTTGACGCGGCGGCGGCGTCTCGGGCGAGCCGGAGCGCGCGTCGCCGCGAGTCTGTCCG
GGCGGCGTTGCGCGAGCGCGCGCCGCCCGGTTCGTTCGGCGCGCCGCGTTCGTGGCGCGCGTTTCGCTTCAGGCGGCGCG
CGCCCGCTCTGTCATCACCGCCGGCGCCCGCCGCGCGTTCGGCGCGACGCGCCGCTCAGGACTCGCTCGTCGCCGCGGTT
TTACGCGGGCGGCGCGCACGCGGGGCCGACTTGCGCGGCGTCTTTGCCGGCGCTGCTTCGGCGGCCGATTCGGGAGCGAA
AGCGTGGGGCGCAGCGTGGGATGGTTCGCCGGCCGCGTCCGCCTCGGCGGCCGCGACGGGCGAGGCGGACGCCGCGCGCG
CCTGGGTTCCCTTCGCCTTTTTCACAGCAGTCTTGCGTGCGCGCGAGCGGGCAGGTTTCGCCGTGTCGGCCGCCTGCGCT
TCGGCCGCTTCGACCGCTTCGGCCACTTTGGCCGATTCGCCCGCGCGAGCCGGTTCGTGCGCGGCTCGCGTTTCATGCGG
CTCGTGCGCGCCATGGGCCGGATGCGTATCGCGCGCGTCGTCCGCCGGGCGTTCGCGGCGCATGCCGCGCGGCGCGGAGT
CGCTCGCCTCGGCGAGTTCGGCGTTCGCTTCGATGTCGGCGTGCGCGTGGCCTTCCGCGCCCGCGGCCGTCTCGACGATC
AGCGGCATCTGCTCGGGCATGCGTTTCTTCGCGCCGCGGGCCTTGCCGTGCGCTTTCTTGCCCGACGGCTTCGCGCCGGC
GGAGGCGTCGTCGACGGCCGCCTCGATCGGCCGCATCATCTCGACGGCCGCCGTCTGGATCGGCCGGAACACGAACGTGC
CCGACTTGTCGTCGCGGCCGATCTCGAGCAGCCCGCGCGCCTGCGCCTCCTCGAGCAGGTTGCCGAACGCGCGAAAGCCG
TAGTACGACTCGTTGA

Upstream 100 bases:

>100_bases
TGCTTTCCCAATTCAGGCAGGCTGCACTGGTAATTCCGCATTGTCTCACTCAATTGATCAACTAATCATCTATATGAATT
ATCGAGCAAGGAGACGGCTG

Downstream 100 bases:

>100_bases
AGTCCGGCTTGCGGCGCTTGATCGCGCTCTTGAGCACCGAGGCCCAGATCTTGCCGCTCTCGCCGCGCTCGGACGCGAGC
GCGTCGAACGTCTCGACGGC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 751; Mature: 751

Protein sequence:

>751_residues
MDETSIRERAVMAKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGASLFFIGYLLFEVPSTLALHRF
GARLWLARIMMTWGVITVLLGFTHSTGVFYVFRFLLGVAEAGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSL
AGGLLLSLDGRLGLAGWQWVFVATGLPAIAVALVAWRYLPESVERATFLSDDEKRVALAALKREASPEAVSESPWRALVD
PRVLMFALAYMLMSTSLYGVTYWLPTLLKSNGVPSSLNGLLNMIPWAIAALLLLWLPARLKRERIVLKAMAAVAGVGVAG
FALSLALPGLPLRFAALVLGGACIRLLYPCFWSLPPRFFSGARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSAGAPM
LVPVVCLAALGVGMLAAASMAGRRRPAWRPDERRLTRRRRLGRAGARVAASLSGRRCASARRPVRSARRVRGARFASGGA
RPLCHHRRRPPRVRRDAPLRTRSSPRFYAGGAHAGPTCAASLPALLRRPIRERKRGAQRGMVRRPRPPRRPRRARRTPRA
PGFPSPFSQQSCVRASGQVSPCRPPALRPLRPLRPLWPIRPREPVRARLAFHAARARHGPDAYRARRPPGVRGACRAARS
RSPRRVRRSLRCRRARGLPRPRPSRRSAASARACVSSRRGPCRALSCPTASRRRRRRRRPPRSAASSRRPPSGSAGTRTC
PTCRRGRSRAARAPAPPRAGCRTRESRSTTR

Sequences:

>Translated_751_residues
MDETSIRERAVMAKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGASLFFIGYLLFEVPSTLALHRF
GARLWLARIMMTWGVITVLLGFTHSTGVFYVFRFLLGVAEAGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSL
AGGLLLSLDGRLGLAGWQWVFVATGLPAIAVALVAWRYLPESVERATFLSDDEKRVALAALKREASPEAVSESPWRALVD
PRVLMFALAYMLMSTSLYGVTYWLPTLLKSNGVPSSLNGLLNMIPWAIAALLLLWLPARLKRERIVLKAMAAVAGVGVAG
FALSLALPGLPLRFAALVLGGACIRLLYPCFWSLPPRFFSGARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSAGAPM
LVPVVCLAALGVGMLAAASMAGRRRPAWRPDERRLTRRRRLGRAGARVAASLSGRRCASARRPVRSARRVRGARFASGGA
RPLCHHRRRPPRVRRDAPLRTRSSPRFYAGGAHAGPTCAASLPALLRRPIRERKRGAQRGMVRRPRPPRRPRRARRTPRA
PGFPSPFSQQSCVRASGQVSPCRPPALRPLRPLRPLWPIRPREPVRARLAFHAARARHGPDAYRARRPPGVRGACRAARS
RSPRRVRRSLRCRRARGLPRPRPSRRSAASARACVSSRRGPCRALSCPTASRRRRRRRRPPRSAASSRRPPSGSAGTRTC
PTCRRGRSRAARAPAPPRAGCRTRESRSTTR
>Mature_751_residues
MDETSIRERAVMAKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGASLFFIGYLLFEVPSTLALHRF
GARLWLARIMMTWGVITVLLGFTHSTGVFYVFRFLLGVAEAGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSL
AGGLLLSLDGRLGLAGWQWVFVATGLPAIAVALVAWRYLPESVERATFLSDDEKRVALAALKREASPEAVSESPWRALVD
PRVLMFALAYMLMSTSLYGVTYWLPTLLKSNGVPSSLNGLLNMIPWAIAALLLLWLPARLKRERIVLKAMAAVAGVGVAG
FALSLALPGLPLRFAALVLGGACIRLLYPCFWSLPPRFFSGARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSAGAPM
LVPVVCLAALGVGMLAAASMAGRRRPAWRPDERRLTRRRRLGRAGARVAASLSGRRCASARRPVRSARRVRGARFASGGA
RPLCHHRRRPPRVRRDAPLRTRSSPRFYAGGAHAGPTCAASLPALLRRPIRERKRGAQRGMVRRPRPPRRPRRARRTPRA
PGFPSPFSQQSCVRASGQVSPCRPPALRPLRPLRPLWPIRPREPVRARLAFHAARARHGPDAYRARRPPGVRGACRAARS
RSPRRVRRSLRCRRARGLPRPRPSRRSAASARACVSSRRGPCRALSCPTASRRRRRRRRPPRSAASSRRPPSGSAGTRTC
PTCRRGRSRAARAPAPPRAGCRTRESRSTTR

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=385, Percent_Identity=35.0649350649351, Blast_Score=202, Evalue=7e-53,
Organism=Escherichia coli, GI2367379, Length=425, Percent_Identity=23.5294117647059, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082320, Length=300, Percent_Identity=23, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=196, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321698, Length=279, Percent_Identity=23.6559139784946, Blast_Score=74, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6319876, Length=204, Percent_Identity=25, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319250, Length=256, Percent_Identity=22.65625, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321502, Length=247, Percent_Identity=28.3400809716599, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322612, Length=292, Percent_Identity=26.3698630136986, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 82541; Mature: 82541

Theoretical pI: Translated: 12.61; Mature: 12.61

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDETSIRERAVMAKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHH
LFFIGYLLFEVPSTLALHRFGARLWLARIMMTWGVITVLLGFTHSTGVFYVFRFLLGVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSLAGGLLLSLDGRLGLAGWQWV
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH
FVATGLPAIAVALVAWRYLPESVERATFLSDDEKRVALAALKREASPEAVSESPWRALVD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHC
PRVLMFALAYMLMSTSLYGVTYWLPTLLKSNGVPSSLNGLLNMIPWAIAALLLLWLPARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRERIVLKAMAAVAGVGVAGFALSLALPGLPLRFAALVLGGACIRLLYPCFWSLPPRFFS
HHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSAGAPMLVPVVCLAALGVGMLAAASM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGRRRPAWRPDERRLTRRRRLGRAGARVAASLSGRRCASARRPVRSARRVRGARFASGGA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLCHHRRRPPRVRRDAPLRTRSSPRFYAGGAHAGPTCAASLPALLRRPIRERKRGAQRG
CHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
MVRRPRPPRRPRRARRTPRAPGFPSPFSQQSCVRASGQVSPCRPPALRPLRPLRPLWPIR
CCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PREPVRARLAFHAARARHGPDAYRARRPPGVRGACRAARSRSPRRVRRSLRCRRARGLPR
CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PRPSRRSAASARACVSSRRGPCRALSCPTASRRRRRRRRPPRSAASSRRPPSGSAGTRTC
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC
PTCRRGRSRAARAPAPPRAGCRTRESRSTTR
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDETSIRERAVMAKIARRLMPLLVIMFLIAFIDRQNVGFAKLQMVHALGMTETSYGLGAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHH
LFFIGYLLFEVPSTLALHRFGARLWLARIMMTWGVITVLLGFTHSTGVFYVFRFLLGVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGFYPGVIYYLTLWFPQSHRTRVLGLFTLGSALANMLGSLAGGLLLSLDGRLGLAGWQWV
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH
FVATGLPAIAVALVAWRYLPESVERATFLSDDEKRVALAALKREASPEAVSESPWRALVD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHC
PRVLMFALAYMLMSTSLYGVTYWLPTLLKSNGVPSSLNGLLNMIPWAIAALLLLWLPARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRERIVLKAMAAVAGVGVAGFALSLALPGLPLRFAALVLGGACIRLLYPCFWSLPPRFFS
HHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GARAAASIAAINSIGNLGGFFAQNLMPYVGKAAGSAGAPMLVPVVCLAALGVGMLAAASM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGRRRPAWRPDERRLTRRRRLGRAGARVAASLSGRRCASARRPVRSARRVRGARFASGGA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLCHHRRRPPRVRRDAPLRTRSSPRFYAGGAHAGPTCAASLPALLRRPIRERKRGAQRG
CHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
MVRRPRPPRRPRRARRTPRAPGFPSPFSQQSCVRASGQVSPCRPPALRPLRPLRPLWPIR
CCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PREPVRARLAFHAARARHGPDAYRARRPPGVRGACRAARSRSPRRVRRSLRCRRARGLPR
CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PRPSRRSAASARACVSSRRGPCRALSCPTASRRRRRRRRPPRSAASSRRPPSGSAGTRTC
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC
PTCRRGRSRAARAPAPPRAGCRTRESRSTTR
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]