Click here to switch to the map view.

The map label for this gene is ycgA [H]

Identifier: 126447511

GI number: 126447511

Start: 749528

End: 751006

Strand: Reverse

Name: ycgA [H]

Synonym: BMA10247_A0812

Alternate gene names: 126447511

Gene position: 751006-749528 (Counterclockwise)

Preceding gene: 126446066

Following gene: 126446074

Centisome position: 31.92

GC content: 69.03

Gene sequence:

>1479_bases
ATGCTCGCCGCGCCCGCGCATTGCGCCGACACGCCTCGAACGCCCGATATGCCCGATATGCCCGATATGCCCGACACGCG
CGGCACGCCCGCGCACGACGCCTCGCCGCGCCCCGAGCACAAGCCGCACGGCAAGATGCTGCATCCGGTCGTGATGATGA
TCTGGGTGCTCGCGGCCGCGGTCGCGCTCACGTGGCTCGTCGATTCCGGCCGCTACGCGCGCAACGGCAAGCTCGTCGTG
CCGGGCACCTATCAGGTCGTGCCGAAGGCAACGTCGCTCGCGACGCTCGTCGCGCCCGCCGTCAGCAAGAGCACGCCGCA
GCTCGCAATGCCCGCGAGCCTCGTGTCCGCGTTCGTCGCGGTGCCGGGCGGGCTCGTGAAGAACGCGCCGCTCATCGTGA
TGGTGATGTTCGTCGGCGGCATGTTCGGCGTGATGCGCAGGACAGGCGTCGTCGACGCGGGCATCGACCGGCTGCTGCAG
CTCACCGGCAACGACGTCTATCTGCTGACGCCGCTCCTGATGATCCTGATCGGGCTCGGCAGCACGCTGCTCGGCTTCAT
CTCCGAGTATCTGGTGATCATTCCGATGGTGATGGTGATCGCGAAGCGGCTCGGGCTGTCGAACCTGTTCGCGGTCGCGC
TCGTCGCGCTCGCCGCGAAGATCGGCTACATCGCGTCCGTCACGAATCCGCTCGCGCTCGCGGTCGCGCAGCCGCTCGTC
GGCGTGCCGCTGTTCAGCGGCGTCGCGCTGCGCGCCGCGGTATTCGCCGTCTATCTGGCGCTCGGCATCCTCTATCTGCT
GCATCACGTGAAGCGCAGCGGCTATCGGCGCGAGCGCGCGAAGGCCCTCGCGCACGCGCACGGCGTCGCGCGCCTGTCGG
TGCGCCACCAGGCGACGCTCGCGCTGCTCGCGGCGGCGGTCGCGATGCTCGTCTTCGGCACGCGCGAGCTGAAGTGGGGC
AACGTCGAGCTTGCCGCGTTCTACGCGTTCGTCGCGATCGCGGCCGACGCGTTCGTCGACGGCATGAAGAGCATGATGCT
CGCGGCGCTGCTGATGGGGCTCGCCGCGTCGGTCGAGTTGCTGCTGCAGAACAGCCTCGTGCTCGACACGCTGATCCATC
TGTTCACCCGGCTCGCGAACGGCCAATCGCCGGTGTGGGTCGCGAACGGGCTGATGGCCGTGCAGATGGTGCTCGACGTG
TTCATTCCGTCGGTGTCGGGCAAAGCGGCCGTGAGCATGCCAATCATCGGGCCGATCGCGCAGCTCTCCGGCGTGAGCGG
GCAGACCTCGGTGCTCGCGTTCGTGCTGGGCGGCGGGCTCACGAACCTCGTCACGCCGACCTCCGGCATGCTGCTCGCGT
ATCTCGCGACCGCGCGCGTCGATTTCGGCGCGTGGCTGCGGTTCGTGCTGCCGCTGTTCGCCGTGCTGCTCGCGCTGTCG
TGCGGCGTGCTCGCGTTCGCCGTGCAGATCGGCTACTGA

Upstream 100 bases:

>100_bases
TCGAGCGGCTGCAAGCCTGCAGCCACGCGATCTCCGCCGAACTCGGCTACGTCCCGGCGCGCGCCGCGCTGCAACCCGCA
TGAAAGCCCGCTCCCCCGCC

Downstream 100 bases:

>100_bases
CGGGCGCGCGGGCCGCTCAGCGCGCGACGGCGGCGGGCATCCGAGCGGCGGCCGAGGTCGTCGACGCGGCCGATGCCGAC
GATGCCGACGATGCCGCCGC

Product: C4-dicarboxylate anaerobic carrier family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MLAAPAHCADTPRTPDMPDMPDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVV
PGTYQVVPKATSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQ
LTGNDVYLLTPLLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLV
GVPLFSGVALRAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWG
NVELAAFYAFVAIAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVLDV
FIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLALS
CGVLAFAVQIGY

Sequences:

>Translated_492_residues
MLAAPAHCADTPRTPDMPDMPDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVV
PGTYQVVPKATSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQ
LTGNDVYLLTPLLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLV
GVPLFSGVALRAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWG
NVELAAFYAFVAIAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVLDV
FIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLALS
CGVLAFAVQIGY
>Mature_492_residues
MLAAPAHCADTPRTPDMPDMPDMPDTRGTPAHDASPRPEHKPHGKMLHPVVMMIWVLAAAVALTWLVDSGRYARNGKLVV
PGTYQVVPKATSLATLVAPAVSKSTPQLAMPASLVSAFVAVPGGLVKNAPLIVMVMFVGGMFGVMRRTGVVDAGIDRLLQ
LTGNDVYLLTPLLMILIGLGSTLLGFISEYLVIIPMVMVIAKRLGLSNLFAVALVALAAKIGYIASVTNPLALAVAQPLV
GVPLFSGVALRAAVFAVYLALGILYLLHHVKRSGYRRERAKALAHAHGVARLSVRHQATLALLAAAVAMLVFGTRELKWG
NVELAAFYAFVAIAADAFVDGMKSMMLAALLMGLAASVELLLQNSLVLDTLIHLFTRLANGQSPVWVANGLMAVQMVLDV
FIPSVSGKAAVSMPIIGPIAQLSGVSGQTSVLAFVLGGGLTNLVTPTSGMLLAYLATARVDFGAWLRFVLPLFAVLLALS
CGVLAFAVQIGY

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=401, Percent_Identity=29.925187032419, Blast_Score=155, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51674; Mature: 51674

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]