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The map label for this gene is tibC [H]

Identifier: 126447510

GI number: 126447510

Start: 1602513

End: 1603733

Strand: Direct

Name: tibC [H]

Synonym: BMA10247_A1664

Alternate gene names: 126447510

Gene position: 1602513-1603733 (Clockwise)

Preceding gene: 126446345

Following gene: 262192864

Centisome position: 68.11

GC content: 67.57

Gene sequence:

>1221_bases
GTGCCGGCCGCGCCGACTGGCAAACATGCAGGCTCACCTGCGCACATACAGGCGCCAACGCATGCGCGAGGCTTCGCACC
GCCCGCCGACATACCGACCTGGTCCGGCACCGAAGGCGTGCGCTTCGACTTCAACGACGGCTGCCGCGTGCTGTTGCCCG
ACGGCGACTGGACGGTCCGCCTGAGCGACATGCACACCGATACGCCGCTGTTCGACGCGCAGATCGGCGCGGGCATCGTC
ACGAGCACGCGCAGGCACTTCGTGCCGTTCCAGATCGAAATCGACTCGGGCGAGAAGCGCGTCTTCAAGCACCAGTTCGA
CGCGCACGGCAAGCCGGTGCTGATTCAGTTCGAGGCGGGCCGGCTCGGCGAAGCGCTCGGCTGGTTCGGCTATGCCGTGA
AATTCCAGCGGCAACATCGTTGCAGGCTCACGTGCGCGATGCCGGCGCCGCTGATCGCGCTGCTGAAGCCGGGCTATCCG
GACATCGAATTCGTGACGCCCGAGCTCGTCAAGCCCGAGTGCTATTACGCGACATACCGGCTCGGGCGCTTTACCGGCGA
CGAAGCGCGCGCGTACCAGCCGAGCGCGCCGCAACTCGTCGGCGTGCATCGCAGCGCCGCGTACATGCTCGGCGTCGATC
CGCGCGAGGCGCCGCCGCGCATCGAGCTCGCCGACGACAGCCGGCCGCTCGCGGGCCGCTATGTCTGCATCGCCGCGCAA
AGCGCGCTGCGCTGCGCGCGCTGGGAGCGGCCCGGCGGCTGGCGGCAAGTGCAGCGATTTCTGACGGCGGCCGGCTATCG
GATCGTCTGCGTCGATTCGCCTTCGCCCGATGTCGCCGACGAAAGCAGCGCGCTCGCGCAAGTCGCGCACGTTCTTCCAC
CCGACACGCCGTGGACAGAACGCGCACGGTGGCTGCGGCATGCGGCGTGCCTGATCGGCGTGCCCGGCGATCTCGCGTGG
CTTGCGTGGGCGGTCGGCGCGCCCGTCGTGCTGATCAGCGGATTCACGCATCCGGTCAGCGAATTCGACACGCCGTACCG
CGTGATCAATTTCCATGCGTGCAATAGCTGCTGGAACGACGCGAGCGCGAACTTCGACGATGCCGATGCATCGGCATGCC
CGCGTCACGCGGGAACGTTGCGGCAGTTCGAATGTGCGCGGCTCGTGAGCGCCGAGCAAATCAAGCACGCGATTCGATCG
ATTCCTGCTATCGCCAGTTGA

Upstream 100 bases:

>100_bases
AAGCGCGCACGAGCCGCCGAAGGTCACGTTCTGCGGCTCGCCGCAAACGCTCGACGCACACGCGCCGCCGGCGTTCGCCC
CTCGTTCGCGCGCGCCGCAG

Downstream 100 bases:

>100_bases
TTCTCCCACCCGACGACAATCCGCCTCATTGGTTCTATACATCCGTATGAAATATCACCGTTTTCCCCGCTCTCATGCTC
AACAAGACACCGGGCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPAAPTGKHAGSPAHIQAPTHARGFAPPADIPTWSGTEGVRFDFNDGCRVLLPDGDWTVRLSDMHTDTPLFDAQIGAGIV
TSTRRHFVPFQIEIDSGEKRVFKHQFDAHGKPVLIQFEAGRLGEALGWFGYAVKFQRQHRCRLTCAMPAPLIALLKPGYP
DIEFVTPELVKPECYYATYRLGRFTGDEARAYQPSAPQLVGVHRSAAYMLGVDPREAPPRIELADDSRPLAGRYVCIAAQ
SALRCARWERPGGWRQVQRFLTAAGYRIVCVDSPSPDVADESSALAQVAHVLPPDTPWTERARWLRHAACLIGVPGDLAW
LAWAVGAPVVLISGFTHPVSEFDTPYRVINFHACNSCWNDASANFDDADASACPRHAGTLRQFECARLVSAEQIKHAIRS
IPAIAS

Sequences:

>Translated_406_residues
MPAAPTGKHAGSPAHIQAPTHARGFAPPADIPTWSGTEGVRFDFNDGCRVLLPDGDWTVRLSDMHTDTPLFDAQIGAGIV
TSTRRHFVPFQIEIDSGEKRVFKHQFDAHGKPVLIQFEAGRLGEALGWFGYAVKFQRQHRCRLTCAMPAPLIALLKPGYP
DIEFVTPELVKPECYYATYRLGRFTGDEARAYQPSAPQLVGVHRSAAYMLGVDPREAPPRIELADDSRPLAGRYVCIAAQ
SALRCARWERPGGWRQVQRFLTAAGYRIVCVDSPSPDVADESSALAQVAHVLPPDTPWTERARWLRHAACLIGVPGDLAW
LAWAVGAPVVLISGFTHPVSEFDTPYRVINFHACNSCWNDASANFDDADASACPRHAGTLRQFECARLVSAEQIKHAIRS
IPAIAS
>Mature_405_residues
PAAPTGKHAGSPAHIQAPTHARGFAPPADIPTWSGTEGVRFDFNDGCRVLLPDGDWTVRLSDMHTDTPLFDAQIGAGIVT
STRRHFVPFQIEIDSGEKRVFKHQFDAHGKPVLIQFEAGRLGEALGWFGYAVKFQRQHRCRLTCAMPAPLIALLKPGYPD
IEFVTPELVKPECYYATYRLGRFTGDEARAYQPSAPQLVGVHRSAAYMLGVDPREAPPRIELADDSRPLAGRYVCIAAQS
ALRCARWERPGGWRQVQRFLTAAGYRIVCVDSPSPDVADESSALAQVAHVLPPDTPWTERARWLRHAACLIGVPGDLAWL
AWAVGAPVVLISGFTHPVSEFDTPYRVINFHACNSCWNDASANFDDADASACPRHAGTLRQFECARLVSAEQIKHAIRSI
PAIAS

Specific function: Glycosylates the tibA adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: NA

Molecular weight: Translated: 44580; Mature: 44449

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAPTGKHAGSPAHIQAPTHARGFAPPADIPTWSGTEGVRFDFNDGCRVLLPDGDWTVR
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEE
LSDMHTDTPLFDAQIGAGIVTSTRRHFVPFQIEIDSGEKRVFKHQFDAHGKPVLIQFEAG
EECCCCCCCCCHHHHCCCEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCC
RLGEALGWFGYAVKFQRQHRCRLTCAMPAPLIALLKPGYPDIEFVTPELVKPECYYATYR
CHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHCCCCCCCEEECHHHCCCCEEEEEEE
LGRFTGDEARAYQPSAPQLVGVHRSAAYMLGVDPREAPPRIELADDSRPLAGRYVCIAAQ
ECCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECH
SALRCARWERPGGWRQVQRFLTAAGYRIVCVDSPSPDVADESSALAQVAHVLPPDTPWTE
HHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHH
RARWLRHAACLIGVPGDLAWLAWAVGAPVVLISGFTHPVSEFDTPYRVINFHACNSCWND
HHHHHHHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCEEEEEEEECCCCCCC
ASANFDDADASACPRHAGTLRQFECARLVSAEQIKHAIRSIPAIAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PAAPTGKHAGSPAHIQAPTHARGFAPPADIPTWSGTEGVRFDFNDGCRVLLPDGDWTVR
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEE
LSDMHTDTPLFDAQIGAGIVTSTRRHFVPFQIEIDSGEKRVFKHQFDAHGKPVLIQFEAG
EECCCCCCCCCHHHHCCCEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCC
RLGEALGWFGYAVKFQRQHRCRLTCAMPAPLIALLKPGYPDIEFVTPELVKPECYYATYR
CHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHCCCCCCCEEECHHHCCCCEEEEEEE
LGRFTGDEARAYQPSAPQLVGVHRSAAYMLGVDPREAPPRIELADDSRPLAGRYVCIAAQ
ECCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECH
SALRCARWERPGGWRQVQRFLTAAGYRIVCVDSPSPDVADESSALAQVAHVLPPDTPWTE
HHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHH
RARWLRHAACLIGVPGDLAWLAWAVGAPVVLISGFTHPVSEFDTPYRVINFHACNSCWND
HHHHHHHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCEEEEEEEECCCCCCC
ASANFDDADASACPRHAGTLRQFECARLVSAEQIKHAIRSIPAIAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10417177 [H]