| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447509
Identifier: 126447509
GI number: 126447509
Start: 232379
End: 233077
Strand: Direct
Name: 126447509
Synonym: BMA10247_A0269
Alternate gene names: NA
Gene position: 232379-233077 (Clockwise)
Preceding gene: 126446445
Following gene: 126446052
Centisome position: 9.88
GC content: 72.39
Gene sequence:
>699_bases ATGACCATCGAAGTGGGATTACTGTTGTTTCCGCAGGTGCAGCAGCTCGACCTGACCGGCCCGCACGACGTGTTCGCATC GCTGCCCGGCGTCACGGTGCGGCTCGTGTGGAAAACGCGCGAGCCGGTGGCGTCGAGCAGCGGGCTCGTGCTTGCGCCGA ACGCGACGTTCGACGATTGCCCGCCGCTCGATGTGATTTGCGTGCCGGGCGGCATCGGCGTCGCCGATCTGATGGAGGAT GCGGACACGCTCGCGTTTTTGCGCCGGCACGCGGCGCATGCGCGCTACGTGAGCTCGGTGTGCACGGGCGCGCTCGTGCT CGGCGCGGCGGGACTGCTGCGCGGGCGGCGCGCGACGACGCACTGGGCGTTCCATTCGCTGCTCGCGCCGTTCGGCGCGA CGCCGGTACGCGAGCGCGTCGTGCGCGACGGCAATCTCGTGACGGGCGGCGGCGTGACCGCGGGGATCGATTTCGCGCTG ACGCTCGCGGCCGAGCTCGTCGGCGAGGACGATGCGCAGGCGGTGCAGTTGCAGCTCGAATATGCGCCGGCCCCGCCGTT CGCGGCGGGCGATCCGGATACCGCGCCGGCGCGGATCGTCGAGCGCATGCGCGAGCGGTCGAAGCCGGTGCTCGCGCGGC GCGAGCAGGTGGTCGCGCGCGCCGTGGCGGCGCTCGAGCGGCAGCGCGCCGACGGGTGA
Upstream 100 bases:
>100_bases TGCGTACAGTCGGTTTGTCCATCGCGCCGGTGCGGTCGGCGCGAGCCGGCGCAACGCTCATGATGTTGACGTGACGTTGA TGAACTGGAGGAGGTTCGGC
Downstream 100 bases:
>100_bases TGCACGTTGCCCGCTGATTGACGGCCCCGCGCGCAAGCGCAGGCCGGGTGTGGCGGCGCGAGGGGACGGCGCCGCCGGAT TGCGGGGCGCGGCTCGCCGC
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Transcriptional Regulatory Protein; AraC Family Transcription Regulator; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMED ADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFAL TLAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERQRADG
Sequences:
>Translated_232_residues MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMED ADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFAL TLAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERQRADG >Mature_231_residues TIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDCPPLDVICVPGGIGVADLMEDA DTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATTHWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALT LAAELVGEDDAQAVQLQLEYAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERQRADG
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24556; Mature: 24425
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDC CEEEEEEEECCCHHEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCC PPLDVICVPGGIGVADLMEDADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATT CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALTLAAELVGEDDAQAVQLQLE HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE YAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERQRADG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIEVGLLLFPQVQQLDLTGPHDVFASLPGVTVRLVWKTREPVASSSGLVLAPNATFDDC EEEEEEEECCCHHEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCC PPLDVICVPGGIGVADLMEDADTLAFLRRHAAHARYVSSVCTGALVLGAAGLLRGRRATT CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLAPFGATPVRERVVRDGNLVTGGGVTAGIDFALTLAAELVGEDDAQAVQLQLE HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE YAPAPPFAAGDPDTAPARIVERMRERSKPVLARREQVVARAVAALERQRADG ECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA