| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is catD [H]
Identifier: 126447451
GI number: 126447451
Start: 48003
End: 48788
Strand: Direct
Name: catD [H]
Synonym: BMA10247_A0059
Alternate gene names: 126447451
Gene position: 48003-48788 (Clockwise)
Preceding gene: 126446175
Following gene: 126446920
Centisome position: 2.04
GC content: 67.43
Gene sequence:
>786_bases ATGCCTTTCGCTTCAGTCGATGGAGTGCGACTGCATTACCGGATCGATCGCGCGGCGCGCGCCGACGCGCCGTGGCTCGT GTTCTCGAACTCGCTCGGCGCGGACCTGTCGATGTGGGCGCCGCAGATCGGCCCGATGACCGCGCACTTCAATCTGCTGC GCTACGACACGCGCGGTCACGGCCACTCGGACGCGCCGGCCGGCTCGTACACGATCGAGCAACTGGCGGGCGACGTGATC GGCCTTCTCGATCACGTCGGTGTCGCGCGCGCGCATTTCTGCGGCATCTCGATGGGCGGCCTGACGGGCGCGGCGCTCGC CGCGCGTCACGCGAAGCGCGTCGATCGCGTGGTGCTGTCGAACACGTCGGCGAAAATCGGCTCGCCGGAAATATGGGCGC CGCGTGCGCGCAAGGCGCGCGCCGAAGGGATGGCGGCGCTCGCCGACGCGGTGCTGCCCCGCTGGTTCACGGCCGCGTTC TTCGAGCGCGAGCCGCGCCTTATCGACGTGATTCGCGATACGTTCAATCACACGGACAAAGACGGCTACGCGGCGAACTG CGATGCGTTGAACGCCGCCGATCTGCGTGACGAGGCGAAAGGCATCGCGGTGCCGACGCTCGTGGTGACGGGCGCGCACG ACCTTTCGACGCCGCCGGAACAGGGCCGCGCGCTTGCCGCGTCGATCGCAGGCGCGAAGCATGTCGAATTCGATTGCGCG CACATCTCGAACATCGAATGTGCGGACGGCTTCAATCGCACGCTGATCGATTTCCTGACGGCCTGA
Upstream 100 bases:
>100_bases GCGGCAGTTGCTCGATCCCGCTCATTACGTCGGCGAGGCGCACGCCTATGTCGACGCCGTGCTCGCGCTCCACGCGAGCC GCCATTAAGGAGAGATACCC
Downstream 100 bases:
>100_bases CGCGAGCGCATCGAGATGAACGACGATCAACGTTACGAAGCGGGCATGAACGTGCGCCGCGCGGTGCTCGGCGATGCGCA CGTCGACCGGTCGCTCGCGA
Product: 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPFASVDGVRLHYRIDRAARADAPWLVFSNSLGADLSMWAPQIGPMTAHFNLLRYDTRGHGHSDAPAGSYTIEQLAGDVI GLLDHVGVARAHFCGISMGGLTGAALAARHAKRVDRVVLSNTSAKIGSPEIWAPRARKARAEGMAALADAVLPRWFTAAF FEREPRLIDVIRDTFNHTDKDGYAANCDALNAADLRDEAKGIAVPTLVVTGAHDLSTPPEQGRALAASIAGAKHVEFDCA HISNIECADGFNRTLIDFLTA
Sequences:
>Translated_261_residues MPFASVDGVRLHYRIDRAARADAPWLVFSNSLGADLSMWAPQIGPMTAHFNLLRYDTRGHGHSDAPAGSYTIEQLAGDVI GLLDHVGVARAHFCGISMGGLTGAALAARHAKRVDRVVLSNTSAKIGSPEIWAPRARKARAEGMAALADAVLPRWFTAAF FEREPRLIDVIRDTFNHTDKDGYAANCDALNAADLRDEAKGIAVPTLVVTGAHDLSTPPEQGRALAASIAGAKHVEFDCA HISNIECADGFNRTLIDFLTA >Mature_260_residues PFASVDGVRLHYRIDRAARADAPWLVFSNSLGADLSMWAPQIGPMTAHFNLLRYDTRGHGHSDAPAGSYTIEQLAGDVIG LLDHVGVARAHFCGISMGGLTGAALAARHAKRVDRVVLSNTSAKIGSPEIWAPRARKARAEGMAALADAVLPRWFTAAFF EREPRLIDVIRDTFNHTDKDGYAANCDALNAADLRDEAKGIAVPTLVVTGAHDLSTPPEQGRALAASIAGAKHVEFDCAH ISNIECADGFNRTLIDFLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=238, Percent_Identity=25.6302521008403, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87081721, Length=234, Percent_Identity=25.2136752136752, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 27950; Mature: 27819
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFASVDGVRLHYRIDRAARADAPWLVFSNSLGADLSMWAPQIGPMTAHFNLLRYDTRGH CCCCCCCCEEEEEEECHHHCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEECCCC GHSDAPAGSYTIEQLAGDVIGLLDHVGVARAHFCGISMGGLTGAALAARHAKRVDRVVLS CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NTSAKIGSPEIWAPRARKARAEGMAALADAVLPRWFTAAFFEREPRLIDVIRDTFNHTDK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC DGYAANCDALNAADLRDEAKGIAVPTLVVTGAHDLSTPPEQGRALAASIAGAKHVEFDCA CCCCCCCCCCCCHHHHHHCCCCEECEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEHH HISNIECADGFNRTLIDFLTA HCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure PFASVDGVRLHYRIDRAARADAPWLVFSNSLGADLSMWAPQIGPMTAHFNLLRYDTRGH CCCCCCCEEEEEEECHHHCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEECCCC GHSDAPAGSYTIEQLAGDVIGLLDHVGVARAHFCGISMGGLTGAALAARHAKRVDRVVLS CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NTSAKIGSPEIWAPRARKARAEGMAALADAVLPRWFTAAFFEREPRLIDVIRDTFNHTDK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC DGYAANCDALNAADLRDEAKGIAVPTLVVTGAHDLSTPPEQGRALAASIAGAKHVEFDCA CCCCCCCCCCCCHHHHHHCCCCEECEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEHH HISNIECADGFNRTLIDFLTA HCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]