| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is argT [H]
Identifier: 126447410
GI number: 126447410
Start: 728597
End: 729379
Strand: Reverse
Name: argT [H]
Synonym: BMA10247_A0792
Alternate gene names: 126447410
Gene position: 729379-728597 (Counterclockwise)
Preceding gene: 126446883
Following gene: 262192853
Centisome position: 31.0
GC content: 63.09
Gene sequence:
>783_bases GTGAAAAAAATCTTGGCGGCTTTGACCGTGGCCCTGCTGGCGGTGTCGGCAGGCGGCGTGCAGGCGAAGGATTGGTCGAC GATCCGCTTTGGCGTCGACGCGAGCTACCCGCCTTTCGAATCGAAAGGTCCGGACGGCAAGGTGGTCGGCTTCGACGTCG ACCTCGGCAACGAAATCTGCAAGCGCGTGAAGGCAAAGTGCGTGTGGATCGAGAACGACTTCGACGGCATGATCCCGGCG CTGAAGGCGCGCAAGTTCGACGGCGTGCTGTCGTCGATGTCGATGACGCCGCAGCGTGAAGAGCAGATCGCGTTCTCGTC GAAGCTGTTCAACACGCCGACGCGCCTCGTCACGAAGAAGGGCGCGAACCTGATGCCGACGGCCGAATCGCTCAAGGGCA AGACGGTCGGCGTCGAGCAGGGCACGATCCAGGAAACCTACGCGAAGGTGCACTGGGCGCCGATGGGCGTGAAGGTGCAA CCGTACCAGAACCAGGATCAGGTCTACGCCGACCTGATCGCGGGCCGCCTCGACGCGGCGCTGCAGGACGCGGTGCAGGC CGACATCGGCTTCCTGAAGACGCCGCGCGGCAAGGACTACGCGTTCGCCGGCACCGACCTCAACGATCCGAAGACGCTCG GCGAAGGCGCGGGCATCGGCCTGCGCAAGGAAGACACCGATCTGAAGGCGAAGATCGACAAGGCGATCGCCGACATGCAC AAGGACGGCACGTACGACAAGATCGCGAAGAAGTACTTCGACTTCGACGTCTACGGCAAGTAA
Upstream 100 bases:
>100_bases ACCGGACGAGGGCACCAGTCAGCCCGGCCGCAGCCGCGCCGGGCCGAAGCGCACTACGGCACGACCGCGCGCAACCATCG AACTACAACGAGGAATGACA
Downstream 100 bases:
>100_bases CGGCAAGCCACGCCGGACCGCGGGCGACGCGTCCATGCGGCGCGCCGCGACCACGGCGGAAACGGGCTTCGCTTCGCGGC GAAGCCCGTTTTTTCATGCG
Product: amino acid ABC transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKKILAALTVALLAVSAGGVQAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRVKAKCVWIENDFDGMIPA LKARKFDGVLSSMSMTPQREEQIAFSSKLFNTPTRLVTKKGANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQ PYQNQDQVYADLIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAIADMH KDGTYDKIAKKYFDFDVYGK
Sequences:
>Translated_260_residues MKKILAALTVALLAVSAGGVQAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRVKAKCVWIENDFDGMIPA LKARKFDGVLSSMSMTPQREEQIAFSSKLFNTPTRLVTKKGANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQ PYQNQDQVYADLIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAIADMH KDGTYDKIAKKYFDFDVYGK >Mature_260_residues MKKILAALTVALLAVSAGGVQAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEICKRVKAKCVWIENDFDGMIPA LKARKFDGVLSSMSMTPQREEQIAFSSKLFNTPTRLVTKKGANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQ PYQNQDQVYADLIAGRLDAALQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAIADMH KDGTYDKIAKKYFDFDVYGK
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=259, Percent_Identity=53.6679536679537, Blast_Score=294, Evalue=5e-81, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=54.9356223175966, Blast_Score=287, Evalue=6e-79, Organism=Escherichia coli, GI1787085, Length=254, Percent_Identity=36.2204724409449, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1787088, Length=253, Percent_Identity=33.9920948616601, Blast_Score=157, Evalue=9e-40, Organism=Escherichia coli, GI1788228, Length=255, Percent_Identity=30.1960784313725, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787031, Length=253, Percent_Identity=32.4110671936759, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1786876, Length=235, Percent_Identity=28.5106382978723, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28334; Mature: 28334
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILAALTVALLAVSAGGVQAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEIC CHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHH KRVKAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIAFSSKLFNTPTRLVTKK HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHC GANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQPYQNQDQVYADLIAGRLDAA CCCCCCCHHHHCCCEECCCCCHHHHHHHHEEECCCCEEECCCCCHHHHHHHHHHHHHHHH LQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAIADMH HHHHHHHHHCCEECCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KDGTYDKIAKKYFDFDVYGK CCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKILAALTVALLAVSAGGVQAKDWSTIRFGVDASYPPFESKGPDGKVVGFDVDLGNEIC CHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHH KRVKAKCVWIENDFDGMIPALKARKFDGVLSSMSMTPQREEQIAFSSKLFNTPTRLVTKK HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHC GANLMPTAESLKGKTVGVEQGTIQETYAKVHWAPMGVKVQPYQNQDQVYADLIAGRLDAA CCCCCCCHHHHCCCEECCCCCHHHHHHHHEEECCCCEEECCCCCHHHHHHHHHHHHHHHH LQDAVQADIGFLKTPRGKDYAFAGTDLNDPKTLGEGAGIGLRKEDTDLKAKIDKAIADMH HHHHHHHHHCCEECCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KDGTYDKIAKKYFDFDVYGK CCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]