| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is yfiK [C]
Identifier: 126447383
GI number: 126447383
Start: 273341
End: 273934
Strand: Direct
Name: yfiK [C]
Synonym: BMA10247_A0313
Alternate gene names: 126447383
Gene position: 273341-273934 (Clockwise)
Preceding gene: 126447512
Following gene: 126446029
Centisome position: 11.62
GC content: 60.94
Gene sequence:
>594_bases TTGCGCTCTCTGGTGGCCCTGCTTTTCGCTGCGGCTGTGGTGATGGGCAGCCCCGGGCCCTCCACCGTCAGTGTGACCGC GATGGGCGCGTCCTACGGAGTGCGCCGGTCGCTCAAGTATGCGTGGGGCCTCATCGCGGGCACGGTGGCGGTATTGCTGC TCGTGTCGACGGGCGTGACGGCATTCGTGATGTCGATGCCGAGCGCAGCGAGGATTCTCAATATCGTTTCGGCCCTCTAC ATCCTCTATCTCGCGTACAGGATCGCCACCGCGCCGCCACTCGACAAGCGGGCGGAAAACCTCTCGTCTCCCGCTTTCAA GGGGGGATTCCTGCTGGCCGTCGCCAATCCGAAGGCGTATATCGCGATCGGCGCGGTATTTGCGGGAACGACGCTCGTCG CGACTGATTACGGTCTCGATGCCGCGGCCAAGATCGTTCTGCTCAGCGTAATGATCGTCATCATCCATCTCGGCTGGCTA TTGGCGGGCGTATCGCTGTCCCGGTTTTTGCACGACCCCGTTGCGTCTCGCATCATCAATGTTTCGTTGGCGGCGATATT AGCCATTGTTTCGCTGATTGCGCTATTCGAATGA
Upstream 100 bases:
>100_bases TTCAAGACAGCCTCCCTGACGCTTCCATAAGCTACCCATTCAAAAAAGATGGCGCGCTGGAGCTTCGATGGTAAACCAAG TCGACCTTGTTTCGGAGACA
Downstream 100 bases:
>100_bases AATACTCGACGTGCCGGCCTCATCGAAGGCGGCACGTTATCTTCAGCGTGGTGCAGGGGGGCAGAGTGACCGAAACGGCG CGGAAACGGAACCCTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine Exporter Protein LysE/YggA; Amino Acid Transporter LysE; Translocator Protein LysE Family; Transporter LysE Family; RhtB Family Transporter; LysE Family Protein; LOW QUALITY PROTEIN Lysine Exporter Protein LysE; Transporter-LysE Family; LysE Family Translocator Protein; Amino Acid Efflux Protein; Transporter LysE Family Protein; Threonine Efflux Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRSLVALLFAAAVVMGSPGPSTVSVTAMGASYGVRRSLKYAWGLIAGTVAVLLLVSTGVTAFVMSMPSAARILNIVSALY ILYLAYRIATAPPLDKRAENLSSPAFKGGFLLAVANPKAYIAIGAVFAGTTLVATDYGLDAAAKIVLLSVMIVIIHLGWL LAGVSLSRFLHDPVASRIINVSLAAILAIVSLIALFE
Sequences:
>Translated_197_residues MRSLVALLFAAAVVMGSPGPSTVSVTAMGASYGVRRSLKYAWGLIAGTVAVLLLVSTGVTAFVMSMPSAARILNIVSALY ILYLAYRIATAPPLDKRAENLSSPAFKGGFLLAVANPKAYIAIGAVFAGTTLVATDYGLDAAAKIVLLSVMIVIIHLGWL LAGVSLSRFLHDPVASRIINVSLAAILAIVSLIALFE >Mature_197_residues MRSLVALLFAAAVVMGSPGPSTVSVTAMGASYGVRRSLKYAWGLIAGTVAVLLLVSTGVTAFVMSMPSAARILNIVSALY ILYLAYRIATAPPLDKRAENLSSPAFKGGFLLAVANPKAYIAIGAVFAGTTLVATDYGLDAAAKIVLLSVMIVIIHLGWL LAGVSLSRFLHDPVASRIINVSLAAILAIVSLIALFE
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20433; Mature: 20433
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLVALLFAAAVVMGSPGPSTVSVTAMGASYGVRRSLKYAWGLIAGTVAVLLLVSTGVT CHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVMSMPSAARILNIVSALYILYLAYRIATAPPLDKRAENLSSPAFKGGFLLAVANPKAY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCEE IAIGAVFAGTTLVATDYGLDAAAKIVLLSVMIVIIHLGWLLAGVSLSRFLHDPVASRIIN EEHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAAILAIVSLIALFE HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSLVALLFAAAVVMGSPGPSTVSVTAMGASYGVRRSLKYAWGLIAGTVAVLLLVSTGVT CHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVMSMPSAARILNIVSALYILYLAYRIATAPPLDKRAENLSSPAFKGGFLLAVANPKAY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCEE IAIGAVFAGTTLVATDYGLDAAAKIVLLSVMIVIIHLGWLLAGVSLSRFLHDPVASRIIN EEHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAAILAIVSLIALFE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA