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The map label for this gene is yqjI [H]

Identifier: 126447334

GI number: 126447334

Start: 21827

End: 22450

Strand: Reverse

Name: yqjI [H]

Synonym: BMA10247_A0027

Alternate gene names: 126447334

Gene position: 22450-21827 (Counterclockwise)

Preceding gene: 126447570

Following gene: 126447929

Centisome position: 0.95

GC content: 69.71

Gene sequence:

>624_bases
ATGTTCGGCGGCCATCGCCGCGGCGGCGGCCGGCATGGCTTCGGCCCATTCGGCGGCTTCGGCGGCGGCGGCCCCGGTGG
GTTCGGCGGCTTCGGAGACGACGCGATGCCGCGCGGCCGTCAATTCAGCGCCGACGATCTGCAGTTGCTGCTGCTCGCGC
TGCTCGCCGAGCAGCCGAGCCACGGCTATGAGCTGATCAAGGCGCTCGACACGCGCTCGAGCGGCTTCTACGCGCCGAGC
CCCGGCATGGTGTATCCGGCGCTCACGTATCTGGAAGAACTCGGCTACGTGACGGTGCAGGCCGAAGGCAACCGCAAGCG
TTACGCGCTCGCCGACGCGGGCCGCGCGCATCTCGACGCGCAGCGTGAACGCGTCGAGATGCTGTTCGCGAAGCTCGCGC
ATCTCGGCCGCAAGATGGAATTCATGCGTCGCGCGTTCGCCGGCGAAGCGCCCGCCGCGCCCGAGGACGACACGCGCGGC
TGGCTGCCGGAATTCGTCGAAGCACGGATGGCGCTCAAGCAAGCGCTCTTTCGCAGAAGCGGTGCAAACGCCGACGAGCA
ACGCCGCATCGCGGCCATTTTGCGGCGCGCCGTCGCCGACATCGAAGGCCGCGCGCAAGGCTGA

Upstream 100 bases:

>100_bases
GACACAGGAGGCGGACATGCGTCACGCTCACCGTTTTTCGCGCCGCGAATGCGGCATGTCCGATTCGTTCGGACACAGCC
CGTTCGAGATGTTTCGTCAG

Downstream 100 bases:

>100_bases
ATCGCGCCGTTTCCGGCTCATCAAGGAGAACCGATCGACATGACCCAACCGACTACCGAGCGCGCGGTCGTACGCGTGCG
TCATACGCTGAAATTCCGCC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MFGGHRRGGGRHGFGPFGGFGGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLALLAEQPSHGYELIKALDTRSSGFYAPS
PGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAAPEDDTRG
WLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG

Sequences:

>Translated_207_residues
MFGGHRRGGGRHGFGPFGGFGGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLALLAEQPSHGYELIKALDTRSSGFYAPS
PGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAAPEDDTRG
WLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG
>Mature_207_residues
MFGGHRRGGGRHGFGPFGGFGGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLALLAEQPSHGYELIKALDTRSSGFYAPS
PGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAAPEDDTRG
WLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=88, Percent_Identity=42.0454545454545, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 22484; Mature: 22484

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGGHRRGGGRHGFGPFGGFGGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLALLAEQPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
HGYELIKALDTRSSGFYAPSPGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEHHHCCHHHHHH
QRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAAPEDDTRGWLPEFVEARMALKQALFRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GANADEQRRIAAILRRAVADIEGRAQG
CCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFGGHRRGGGRHGFGPFGGFGGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLALLAEQPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
HGYELIKALDTRSSGFYAPSPGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEHHHCCHHHHHH
QRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAAPEDDTRGWLPEFVEARMALKQALFRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GANADEQRRIAAILRRAVADIEGRAQG
CCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]