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The map label for this gene is virG [H]

Identifier: 126447328

GI number: 126447328

Start: 1607621

End: 1608358

Strand: Reverse

Name: virG [H]

Synonym: BMA10247_A1669

Alternate gene names: 126447328

Gene position: 1608358-1607621 (Counterclockwise)

Preceding gene: 126446436

Following gene: 126447767

Centisome position: 68.36

GC content: 66.4

Gene sequence:

>738_bases
ATGACGAATGTGACAAGATCGCCGGCGGTGCTCGTCGTCGAGGACGACGAACCGTTGCGGCGCGTGCTTTGCAATTACCT
GTCGGGCCACGGGATGGCCGTGGACGGCGTGGGAACGGCGGCAGCGGCCGCCGAATCGGTCGGGCGGCGCGAATACGAGA
TGGTGCTGCTCGATCTCGGCCTGCCGGACGGCGACGGCATCGACGTGCTGCTGCGCTGGCGCGAAACGCAGCGCTTTCCG
CTCATCTGCGTGACGGGGCGCAGCGAAGAGGCCGATCGCATCATGGGCCTCGAATTCGGCGCGGACGATTACGTCGTGAA
GCCGTACTCGCTGCGCGAGGTGCTCGCCCGGATGCGCGCGCTGTGGCGGCGCGCCGAGCCGTCGACGACGCCCGTGCGGC
GCGGCAGGCATCCGCGTGCGTACCGCTTCGACGGATGGACGCTGAACATGAACACGCGCCGGCTGTTGACGCGCGATGCG
CAGGAAATTCCGCTGACGGTCGGCGAATTCAACCTGCTCGCGTTCTTTCTCGGCTCGCCGTCGCGCGTCGTCACGCGCGC
GCAGTTGCTCGAGTGCACGCGTGCGTTCGACGACGTGTTCGATCGCGCGGTCGACGTGCAGATCTGGCGGCTGCGCAAGA
AAATCGAGAAGGATCCGAAGCATCCCGAACTGATTCGAACCGAGCGGGGCGTCGGCTACTACTTCGACGCGAAAGAGGTG
GAGACGCTATGGGGATGA

Upstream 100 bases:

>100_bases
GCGCGGGCAGTTGCTTCCGGCTCACGTTGCCGGCGGCATGGGGAACGGGCGCGCCCGGCGCAATGGACGCCGGCGCGCCC
GGCGCAGTACAGGAGAGGAC

Downstream 100 bases:

>100_bases
GCGAACGGCGCCCGCCCGGCGGCGCGGCGGCGCGCGCGCGCATGCCGATCGATGTCCAAGCGCTCGCCGTGCTGGGGCGC
ACGGACATCGATTCCGCCAT

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTNVTRSPAVLVVEDDEPLRRVLCNYLSGHGMAVDGVGTAAAAAESVGRREYEMVLLDLGLPDGDGIDVLLRWRETQRFP
LICVTGRSEEADRIMGLEFGADDYVVKPYSLREVLARMRALWRRAEPSTTPVRRGRHPRAYRFDGWTLNMNTRRLLTRDA
QEIPLTVGEFNLLAFFLGSPSRVVTRAQLLECTRAFDDVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGVGYYFDAKEV
ETLWG

Sequences:

>Translated_245_residues
MTNVTRSPAVLVVEDDEPLRRVLCNYLSGHGMAVDGVGTAAAAAESVGRREYEMVLLDLGLPDGDGIDVLLRWRETQRFP
LICVTGRSEEADRIMGLEFGADDYVVKPYSLREVLARMRALWRRAEPSTTPVRRGRHPRAYRFDGWTLNMNTRRLLTRDA
QEIPLTVGEFNLLAFFLGSPSRVVTRAQLLECTRAFDDVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGVGYYFDAKEV
ETLWG
>Mature_244_residues
TNVTRSPAVLVVEDDEPLRRVLCNYLSGHGMAVDGVGTAAAAAESVGRREYEMVLLDLGLPDGDGIDVLLRWRETQRFPL
ICVTGRSEEADRIMGLEFGADDYVVKPYSLREVLARMRALWRRAEPSTTPVRRGRHPRAYRFDGWTLNMNTRRLLTRDAQ
EIPLTVGEFNLLAFFLGSPSRVVTRAQLLECTRAFDDVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGVGYYFDAKEVE
TLWG

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=39.0350877192982, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=34.1991341991342, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786911, Length=236, Percent_Identity=36.4406779661017, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787229, Length=239, Percent_Identity=36.4016736401674, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786599, Length=235, Percent_Identity=37.0212765957447, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788394, Length=244, Percent_Identity=34.0163934426229, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=33.1896551724138, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=35.2422907488987, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790552, Length=238, Percent_Identity=35.2941176470588, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=34.1991341991342, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1787375, Length=234, Percent_Identity=32.9059829059829, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=31.8777292576419, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=31.3304721030043, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003174
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28026; Mature: 27895

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVTRSPAVLVVEDDEPLRRVLCNYLSGHGMAVDGVGTAAAAAESVGRREYEMVLLDLG
CCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCEEEEEEEEEC
LPDGDGIDVLLRWRETQRFPLICVTGRSEEADRIMGLEFGADDYVVKPYSLREVLARMRA
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEEEEECCCCEEECCHHHHHHHHHHHH
LWRRAEPSTTPVRRGRHPRAYRFDGWTLNMNTRRLLTRDAQEIPLTVGEFNLLAFFLGSP
HHHHCCCCCCHHHCCCCCCCEEECCEEECCCHHHHHHCCHHHCCEEECCCEEEEEECCCC
SRVVTRAQLLECTRAFDDVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGVGYYFDAKEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECHHHH
ETLWG
HHHCC
>Mature Secondary Structure 
TNVTRSPAVLVVEDDEPLRRVLCNYLSGHGMAVDGVGTAAAAAESVGRREYEMVLLDLG
CCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCEEEEEEEEEC
LPDGDGIDVLLRWRETQRFPLICVTGRSEEADRIMGLEFGADDYVVKPYSLREVLARMRA
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEEEEECCCCEEECCHHHHHHHHHHHH
LWRRAEPSTTPVRRGRHPRAYRFDGWTLNMNTRRLLTRDAQEIPLTVGEFNLLAFFLGSP
HHHHCCCCCCHHHCCCCCCCEEECCEEECCCHHHHHHCCHHHCCEEECCCEEEEEECCCC
SRVVTRAQLLECTRAFDDVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGVGYYFDAKEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECHHHH
ETLWG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027669 [H]