| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447325
Identifier: 126447325
GI number: 126447325
Start: 622623
End: 624023
Strand: Reverse
Name: 126447325
Synonym: BMA10247_A0672
Alternate gene names: NA
Gene position: 624023-622623 (Counterclockwise)
Preceding gene: 126446653
Following gene: 126445626
Centisome position: 26.52
GC content: 68.31
Gene sequence:
>1401_bases ATGAAAAAACTGAAATACGCGGCAGCGCTGCTGACCGCGGTCGCGATGAGCCCGTCGTGGTCGCAAGCCTCGACCCTCGT CGCGCAATCGCACGTGGACGGCGTGAGCCGCGCCGAGCCGGCGAAAATCGGCGAGCAGCTCGCCGCGCGCCGCGCGTCGC TGCCCACTCTGCCGCGCCCGCTGCCCACGCTGTCCGCCGGCGCGATTCGCCAAGCCGGCCTGCGCGCGCCGCTCGCGAAG CGCCAGGCGACGCTCGCCGCGCCGGCCGCCGCGACCGTCGCGCCGCCCGTCGCGAACTGCACCGACGTGACGATCGGCGC CGCGTACAACGCGGCCACCGCGCCCGCCGGCCAGGCCGACTGCTTCCAGTTCGTCGCGCCGAGCGCGACGAAGATCGTCG CATACGTCGTGAACCTGCCCGCGAACGAGCAGCACGACGCGCATCTGGTGCAGGTCAACGAAGACGGCTCGTGGACGGTG CTCGACAGCCAGGCCGACCTGTCGCCAAACAAGATCGTCGAGGCGGTGCCGAACGGCCCGGTGCGCCTGCTGCTGCTCGT CAGCGCGCAGCAGGGCGCGGGCAATGCGCCGTTCCAGTTCCAGGTGCTCGGCACGACGGGCTACGACAGCTACGAGCCGA ACGATTCGATCCTGCATCCGACGAAGCTCACGGGCAACCAGTTGATCAGCGCGAACCTCGATACGGTCGCGGATTTCGAC TACTACGCGGTGCAGGTGCCGTCGACGCAGACGGCGAACTACGTGACGTTCAAGGGCGCGGGCACGCAAACGGCCGAGCT CGAGACCGCGCCGAACACGTGGGCGACGCTCGCGTCGGGCACGTCGTACAACATCACGTCGCCCGCGGGCGCGACGCTGA TGTTCCGCGTCTACGACAAGGGCACGACCGCGCCCGCCGCGCAGGCATACACGCTGCGCATATCGGACGGCGCGGGCACC GCGGGCTTCTATCGCTTCCTCGACGAAGAGAACATCACGCACCTCGTGCGCGGCAACGAGAACGTCGCGCGGGTCGTGTC GGCGGGCACGATTGCGTGGGACTCGACGGGCAACGTGCGCCTGCCGCCGGGCGAGCGCATCTGGCTGCGCGCGTACGATA GCGCGGGCCCGAACGGCCCCAACACGCTGCTGTCGGAAACCTCGGGCTACACCGACGCGAACGGCAACCTGCTCGTCAAT CTGAATGTCGGCGTGTGCCAGGGCGGCGGAACGATGACGGGCGACTTCAATACGATGTCGGTGCCTTCGGATCGCTGGCG GATCACCTATAACCCGTATGCGTTCGTGGTCGCGTATCTCGACAACGCGCAAATCCGGGCGCAGACGTCGATCAAGCACT TCACGCACATCTGCACCGAGCAGTACCTCGGCCGCAAGTAA
Upstream 100 bases:
>100_bases CGTTCGCCCGCCCATCGACCCGAAACTTTCCCGCCCTTTTTTTCCTCGGCAAACGTATGATGATTGCCGCGCATCCAGCG CATCCACATACGGAGACCCT
Downstream 100 bases:
>100_bases AGGGCGGCGCGGAACATGCGGCCCGCATTCGGCGGGCCGCATCGCATCGCGGGCGAGACCGGCCGGCGCGGCGCGCGCCG CTCGCGCGGGATGAGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKKLKYAAALLTAVAMSPSWSQASTLVAQSHVDGVSRAEPAKIGEQLAARRASLPTLPRPLPTLSAGAIRQAGLRAPLAK RQATLAAPAAATVAPPVANCTDVTIGAAYNAATAPAGQADCFQFVAPSATKIVAYVVNLPANEQHDAHLVQVNEDGSWTV LDSQADLSPNKIVEAVPNGPVRLLLLVSAQQGAGNAPFQFQVLGTTGYDSYEPNDSILHPTKLTGNQLISANLDTVADFD YYAVQVPSTQTANYVTFKGAGTQTAELETAPNTWATLASGTSYNITSPAGATLMFRVYDKGTTAPAAQAYTLRISDGAGT AGFYRFLDEENITHLVRGNENVARVVSAGTIAWDSTGNVRLPPGERIWLRAYDSAGPNGPNTLLSETSGYTDANGNLLVN LNVGVCQGGGTMTGDFNTMSVPSDRWRITYNPYAFVVAYLDNAQIRAQTSIKHFTHICTEQYLGRK
Sequences:
>Translated_466_residues MKKLKYAAALLTAVAMSPSWSQASTLVAQSHVDGVSRAEPAKIGEQLAARRASLPTLPRPLPTLSAGAIRQAGLRAPLAK RQATLAAPAAATVAPPVANCTDVTIGAAYNAATAPAGQADCFQFVAPSATKIVAYVVNLPANEQHDAHLVQVNEDGSWTV LDSQADLSPNKIVEAVPNGPVRLLLLVSAQQGAGNAPFQFQVLGTTGYDSYEPNDSILHPTKLTGNQLISANLDTVADFD YYAVQVPSTQTANYVTFKGAGTQTAELETAPNTWATLASGTSYNITSPAGATLMFRVYDKGTTAPAAQAYTLRISDGAGT AGFYRFLDEENITHLVRGNENVARVVSAGTIAWDSTGNVRLPPGERIWLRAYDSAGPNGPNTLLSETSGYTDANGNLLVN LNVGVCQGGGTMTGDFNTMSVPSDRWRITYNPYAFVVAYLDNAQIRAQTSIKHFTHICTEQYLGRK >Mature_466_residues MKKLKYAAALLTAVAMSPSWSQASTLVAQSHVDGVSRAEPAKIGEQLAARRASLPTLPRPLPTLSAGAIRQAGLRAPLAK RQATLAAPAAATVAPPVANCTDVTIGAAYNAATAPAGQADCFQFVAPSATKIVAYVVNLPANEQHDAHLVQVNEDGSWTV LDSQADLSPNKIVEAVPNGPVRLLLLVSAQQGAGNAPFQFQVLGTTGYDSYEPNDSILHPTKLTGNQLISANLDTVADFD YYAVQVPSTQTANYVTFKGAGTQTAELETAPNTWATLASGTSYNITSPAGATLMFRVYDKGTTAPAAQAYTLRISDGAGT AGFYRFLDEENITHLVRGNENVARVVSAGTIAWDSTGNVRLPPGERIWLRAYDSAGPNGPNTLLSETSGYTDANGNLLVN LNVGVCQGGGTMTGDFNTMSVPSDRWRITYNPYAFVVAYLDNAQIRAQTSIKHFTHICTEQYLGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49280; Mature: 49280
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKYAAALLTAVAMSPSWSQASTLVAQSHVDGVSRAEPAKIGEQLAARRASLPTLPRP CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC LPTLSAGAIRQAGLRAPLAKRQATLAAPAAATVAPPVANCTDVTIGAAYNAATAPAGQAD CCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCHH CFQFVAPSATKIVAYVVNLPANEQHDAHLVQVNEDGSWTVLDSQADLSPNKIVEAVPNGP HHHHHCCCHHEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCC VRLLLLVSAQQGAGNAPFQFQVLGTTGYDSYEPNDSILHPTKLTGNQLISANLDTVADFD EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCEEEECCCCCEECCC YYAVQVPSTQTANYVTFKGAGTQTAELETAPNTWATLASGTSYNITSPAGATLMFRVYDK EEEEECCCCCCCCEEEEECCCCCCEEEECCCCCEEEEECCCEEEECCCCCCEEEEEEECC GTTAPAAQAYTLRISDGAGTAGFYRFLDEENITHLVRGNENVARVVSAGTIAWDSTGNVR CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCEEEEECCEEEECCCCCEE LPPGERIWLRAYDSAGPNGPNTLLSETSGYTDANGNLLVNLNVGVCQGGGTMTGDFNTMS CCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEC VPSDRWRITYNPYAFVVAYLDNAQIRAQTSIKHFTHICTEQYLGRK CCCCCEEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLKYAAALLTAVAMSPSWSQASTLVAQSHVDGVSRAEPAKIGEQLAARRASLPTLPRP CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC LPTLSAGAIRQAGLRAPLAKRQATLAAPAAATVAPPVANCTDVTIGAAYNAATAPAGQAD CCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCHH CFQFVAPSATKIVAYVVNLPANEQHDAHLVQVNEDGSWTVLDSQADLSPNKIVEAVPNGP HHHHHCCCHHEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCC VRLLLLVSAQQGAGNAPFQFQVLGTTGYDSYEPNDSILHPTKLTGNQLISANLDTVADFD EEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCEEEECCCCCEECCC YYAVQVPSTQTANYVTFKGAGTQTAELETAPNTWATLASGTSYNITSPAGATLMFRVYDK EEEEECCCCCCCCEEEEECCCCCCEEEECCCCCEEEEECCCEEEECCCCCCEEEEEEECC GTTAPAAQAYTLRISDGAGTAGFYRFLDEENITHLVRGNENVARVVSAGTIAWDSTGNVR CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCEEEEECCEEEECCCCCEE LPPGERIWLRAYDSAGPNGPNTLLSETSGYTDANGNLLVNLNVGVCQGGGTMTGDFNTMS CCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEC VPSDRWRITYNPYAFVVAYLDNAQIRAQTSIKHFTHICTEQYLGRK CCCCCEEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA