| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126447248
Identifier: 126447248
GI number: 126447248
Start: 1785091
End: 1785573
Strand: Reverse
Name: 126447248
Synonym: BMA10247_A1854
Alternate gene names: NA
Gene position: 1785573-1785091 (Counterclockwise)
Preceding gene: 126446786
Following gene: 126447393
Centisome position: 75.89
GC content: 62.94
Gene sequence:
>483_bases ATGTCGAACACTCCCCCGGAATTGCTGAAGGCGGCCGATATCGAGGCGATGGAGGCCGTGCGCTCGGTTCACGTGCTGAA CGCGAACGCGGTGCGCCTGAAGAAGCCGCTGAGCGAGAAGACCGGAATCACGCAGTTCGGGTTCCTGATCGTCACGCTGA TGCCGGGGCATGAATCGTCCGAATGTCATCGGCATCTTTACGAAGAGGAGTGCGTGTACATCCTGTCCGGGTACGGGGAG GCGACGCTCGGGGAGCGCGCATATCCGGTCGGGCCGGGGGATTTTCTGGGGTTCGCGCGGCGCGGGCCGGCGCATGTGCT GAAGAACACGTGGGATGTGCCGTTGGTGTTCATCACCGCCGGGCAGCGGCTGGAACATGACGTCTGCGAATATCCGAGGG TGGGGAAGCGGTTGTTCGTGGCGGGGGAAATGGAGGGGTATGTGGATTGGGAGGAAGGGCCGCGCGAAATGCTCGGCGAT TGA
Upstream 100 bases:
>100_bases GCGTAGACGGGCGGCGGCGACGGTTGCGGCCCGGGTGGGCCGGGCCGCGGCGCGGTTGTGTTATTCGAATCGGATTATCC CCATTGGAGCGAGAGGAATC
Downstream 100 bases:
>100_bases GCGATCCGCGCAGCCGATTGATCCGTGCAGTGAGCTTCTCCACGCAGCCGGTGCGCATGCGGCGCAGCCCATCGGCGCGT TCTGCCGGACGGGCGATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Domain Protein; Cupin 2 Protein; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGE ATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD
Sequences:
>Translated_160_residues MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGE ATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD >Mature_159_residues SNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGEA TLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD
Specific function: Unknown
COG id: COG3837
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17831; Mature: 17699
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESS CCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCEECEEEEEECCCCCCH ECHRHLYEEECVYILSGYGEATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITA HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEEEEC GQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD CCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHCC >Mature Secondary Structure SNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESS CCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCEECEEEEEECCCCCCH ECHRHLYEEECVYILSGYGEATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITA HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEEEEC GQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD CCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA