Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126447248

Identifier: 126447248

GI number: 126447248

Start: 1785091

End: 1785573

Strand: Reverse

Name: 126447248

Synonym: BMA10247_A1854

Alternate gene names: NA

Gene position: 1785573-1785091 (Counterclockwise)

Preceding gene: 126446786

Following gene: 126447393

Centisome position: 75.89

GC content: 62.94

Gene sequence:

>483_bases
ATGTCGAACACTCCCCCGGAATTGCTGAAGGCGGCCGATATCGAGGCGATGGAGGCCGTGCGCTCGGTTCACGTGCTGAA
CGCGAACGCGGTGCGCCTGAAGAAGCCGCTGAGCGAGAAGACCGGAATCACGCAGTTCGGGTTCCTGATCGTCACGCTGA
TGCCGGGGCATGAATCGTCCGAATGTCATCGGCATCTTTACGAAGAGGAGTGCGTGTACATCCTGTCCGGGTACGGGGAG
GCGACGCTCGGGGAGCGCGCATATCCGGTCGGGCCGGGGGATTTTCTGGGGTTCGCGCGGCGCGGGCCGGCGCATGTGCT
GAAGAACACGTGGGATGTGCCGTTGGTGTTCATCACCGCCGGGCAGCGGCTGGAACATGACGTCTGCGAATATCCGAGGG
TGGGGAAGCGGTTGTTCGTGGCGGGGGAAATGGAGGGGTATGTGGATTGGGAGGAAGGGCCGCGCGAAATGCTCGGCGAT
TGA

Upstream 100 bases:

>100_bases
GCGTAGACGGGCGGCGGCGACGGTTGCGGCCCGGGTGGGCCGGGCCGCGGCGCGGTTGTGTTATTCGAATCGGATTATCC
CCATTGGAGCGAGAGGAATC

Downstream 100 bases:

>100_bases
GCGATCCGCGCAGCCGATTGATCCGTGCAGTGAGCTTCTCCACGCAGCCGGTGCGCATGCGGCGCAGCCCATCGGCGCGT
TCTGCCGGACGGGCGATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin Domain Protein; Cupin 2 Protein; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGE
ATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD

Sequences:

>Translated_160_residues
MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGE
ATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD
>Mature_159_residues
SNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESSECHRHLYEEECVYILSGYGEA
TLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITAGQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD

Specific function: Unknown

COG id: COG3837

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17831; Mature: 17699

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESS
CCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCEECEEEEEECCCCCCH
ECHRHLYEEECVYILSGYGEATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITA
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEEEEC
GQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD
CCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHCC
>Mature Secondary Structure 
SNTPPELLKAADIEAMEAVRSVHVLNANAVRLKKPLSEKTGITQFGFLIVTLMPGHESS
CCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCCEECEEEEEECCCCCCH
ECHRHLYEEECVYILSGYGEATLGERAYPVGPGDFLGFARRGPAHVLKNTWDVPLVFITA
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEEEEC
GQRLEHDVCEYPRVGKRLFVAGEMEGYVDWEEGPREMLGD
CCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA