| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447176
Identifier: 126447176
GI number: 126447176
Start: 406999
End: 409203
Strand: Direct
Name: 126447176
Synonym: BMA10247_A0460
Alternate gene names: NA
Gene position: 406999-409203 (Clockwise)
Preceding gene: 126447004
Following gene: 262192865
Centisome position: 17.3
GC content: 65.22
Gene sequence:
>2205_bases GTGACCCGCGTGTTCACACTCGACAGCCTGCACGGCGACGACCTGAAGTTCCACCGGCTCTACGGCGAGGAAGCGCTCGG GCGGATGTTCGACTTCCGGATCGAAGCGCTCGCCGACAATCACAGCCTGTCGCTGAAGGAACTGCTCGGCAAGCCGGTGA CGGTGCGCATCCGGCAGCAGGACGAATCGGAGCGCCATCTGAACGGGATCGTCGCGCGCGCCGCGCTGGTCGGGCGGCGC GCGGAGCGGCATTACGGCTATCAACTGATCGTGCGGCCGTGGCTGTGGCTCGCGACGCGCCGCTCCGATTGCCGGATCTT CCAGAACAAGACGGTGCCGGAGATCGTGCAGGACGTGCTCGGCACGTACGGCTTTCCGATCGAAAACCATCTGACCGACA CGTACGCGCCGCGCGACTACTGCGTGCAGTACAACGAGACCGACGCGGCGTTCGTGTCGCGGCTGATGGAGTTCGAAGGG ATCTACTACTACTTCAAGCACGCCGCGCAAACGCACACGCTGATGCTGTGCGACGCGATGGCGTCGCACGTCGCGCTGCC GGGCTACGAGCACATTCCGTTCATCGCGCGCGACCGCACCGCGATCGCCGACGAAGAGCACATCGACAGCTGGCTGCCCG CGCAGGAAGTGAGCATCGGCAAGCACGAGACGAGCGACTACGACTACACGAAGCCGCGCGCGGATCTGTCCGCGCAGAAG ATCGATCCGCGCGGCCACGACCATGACGGCTTCGCGTCGTTCGAATGGCCCGGCGGCTATCGCGACGATGAACCGGGCGC GCATTACAGCCGCGTGCGGCTCGAAGAGCAGCAGGCGGAGCACGAACGCGCGCTCGCGCGCACCGACGTGCGCGGCATCG CACCCGGCTATCTGTTCACGCTCGAACACTGCCCGCGCGCCGACCAGAACCGCGAATACCTGATCGTGCGCTGCCAGTAT CGGTTTCAGGAGAACGCGTACGCGACCGATAGCGGCAACGAGGCGGTCGTGCACGAATCTCAGACACTCGTGCAGCCTTC GAGCCTGCCGTATCGCTCGCCGCGCGCGACGCCGCGGCCGCGCACGAACGGCCCGCAGACGGCGACCGTCGTCGGCCCGA AGGGCGAGGAAATCTGGACGGACCAGTACGGGCGCGTGAAGCTGCAATTTCGCTGGGACCGCTACGGGCAGAGCGACCAG AACTCGTCGTGCTGGGTGCGCGTGTCGAGCCCGTGGGCGGGCGGCGGCTTCGGCGGCGTGCAGATCCCGCGCATCGGCGA TGAGGTGGTGGTCGATTTCCTGAACGGCGACCCCGATCAGCCGATCGTGACGGGGCGCGTGTACAACGGCGAGAAGATGC CGCCATGGGGGCTGCCCGGCAGCGCGACACAAAGCGGGCTGCTGTCGCGCTCGTCGCCGGGCGGCACGGCCGAGCATTCG AACGCGTTTCGCTTCGAGGACAAGAAGGGCGCGGAGCAGCTGTGGATGCATGCGGAGCGCAACTTCGACGCGGAGACTGA GCAGGACCACACGCTGTCGGTGGGCCACGATCATTCGCATTCGGTCGGCAACAACGAGATGATGAGCGTCGCGAACGACC GGCAAAGGAGCGTCGGGCAGAACGAGACGGTGAACATCGGGAAACATCGCGTCGCGCAGATCGGCGGGAACGAGACGCAT GGCGTCGCGGGAAACCGCACGCGGCAGGTCGGACAGAACGAAGCCGTGACGATCGGCGCGAATCGCGAGGCGACGATCGG CGGCAATCACGTGGAGACGGTCGCGAAAGACAAGACCGAAACGATTGGGCAGGGCAAGACGCTGAATGTCACTCAGCACT ATCAGACGACTTCGAAGAGCATGAAGACCGCTGTCGCCGAACATCACGCCGAGGAGATCGGCTCGCGAACGTCGACGATC GAGAAAGCGCACGAGCTCAACGTTGGCGGTTCTCAATCGGTGAACGTTGGCGCGAGCCACACGATGAGCGTGAAGAACAA CGTACATGTCGGCGCGGGCGATCAGATCTCGCTCGTTTGCGGCGATGCGAGCATCACGCTGAAGAAGGACGGCACGATCG CGATCAACGGCGTCACGGTGGAATCGAGCGCCAGCGGAAGCCATAGCGTGCGCGGCAAGACAGTGACGTCGTCGGCGACG GGCGAGCACACGGTGGAAGGCACGATACTGAAACTGAACCCCTGA
Upstream 100 bases:
>100_bases AGATCCTGCGCGCGACGATCGAGGGGCGCGCGCTGCGGGCGATCGACGTGAGCGCCGAAGACGGCCAGTTCGTTTACCGA TTCGAAGAGGAGGGCGCGAC
Downstream 100 bases:
>100_bases CGGGGCGCGAGGATCATGCAGAACTGGCAACCCACGAACCCCGTGGAGCGCAGGTTCATGGATGCGCACACGGATTGGCA ACGCTTCGCGAAGGATCGCG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 734; Mature: 733
Protein sequence:
>734_residues MTRVFTLDSLHGDDLKFHRLYGEEALGRMFDFRIEALADNHSLSLKELLGKPVTVRIRQQDESERHLNGIVARAALVGRR AERHYGYQLIVRPWLWLATRRSDCRIFQNKTVPEIVQDVLGTYGFPIENHLTDTYAPRDYCVQYNETDAAFVSRLMEFEG IYYYFKHAAQTHTLMLCDAMASHVALPGYEHIPFIARDRTAIADEEHIDSWLPAQEVSIGKHETSDYDYTKPRADLSAQK IDPRGHDHDGFASFEWPGGYRDDEPGAHYSRVRLEEQQAEHERALARTDVRGIAPGYLFTLEHCPRADQNREYLIVRCQY RFQENAYATDSGNEAVVHESQTLVQPSSLPYRSPRATPRPRTNGPQTATVVGPKGEEIWTDQYGRVKLQFRWDRYGQSDQ NSSCWVRVSSPWAGGGFGGVQIPRIGDEVVVDFLNGDPDQPIVTGRVYNGEKMPPWGLPGSATQSGLLSRSSPGGTAEHS NAFRFEDKKGAEQLWMHAERNFDAETEQDHTLSVGHDHSHSVGNNEMMSVANDRQRSVGQNETVNIGKHRVAQIGGNETH GVAGNRTRQVGQNEAVTIGANREATIGGNHVETVAKDKTETIGQGKTLNVTQHYQTTSKSMKTAVAEHHAEEIGSRTSTI EKAHELNVGGSQSVNVGASHTMSVKNNVHVGAGDQISLVCGDASITLKKDGTIAINGVTVESSASGSHSVRGKTVTSSAT GEHTVEGTILKLNP
Sequences:
>Translated_734_residues MTRVFTLDSLHGDDLKFHRLYGEEALGRMFDFRIEALADNHSLSLKELLGKPVTVRIRQQDESERHLNGIVARAALVGRR AERHYGYQLIVRPWLWLATRRSDCRIFQNKTVPEIVQDVLGTYGFPIENHLTDTYAPRDYCVQYNETDAAFVSRLMEFEG IYYYFKHAAQTHTLMLCDAMASHVALPGYEHIPFIARDRTAIADEEHIDSWLPAQEVSIGKHETSDYDYTKPRADLSAQK IDPRGHDHDGFASFEWPGGYRDDEPGAHYSRVRLEEQQAEHERALARTDVRGIAPGYLFTLEHCPRADQNREYLIVRCQY RFQENAYATDSGNEAVVHESQTLVQPSSLPYRSPRATPRPRTNGPQTATVVGPKGEEIWTDQYGRVKLQFRWDRYGQSDQ NSSCWVRVSSPWAGGGFGGVQIPRIGDEVVVDFLNGDPDQPIVTGRVYNGEKMPPWGLPGSATQSGLLSRSSPGGTAEHS NAFRFEDKKGAEQLWMHAERNFDAETEQDHTLSVGHDHSHSVGNNEMMSVANDRQRSVGQNETVNIGKHRVAQIGGNETH GVAGNRTRQVGQNEAVTIGANREATIGGNHVETVAKDKTETIGQGKTLNVTQHYQTTSKSMKTAVAEHHAEEIGSRTSTI EKAHELNVGGSQSVNVGASHTMSVKNNVHVGAGDQISLVCGDASITLKKDGTIAINGVTVESSASGSHSVRGKTVTSSAT GEHTVEGTILKLNP >Mature_733_residues TRVFTLDSLHGDDLKFHRLYGEEALGRMFDFRIEALADNHSLSLKELLGKPVTVRIRQQDESERHLNGIVARAALVGRRA ERHYGYQLIVRPWLWLATRRSDCRIFQNKTVPEIVQDVLGTYGFPIENHLTDTYAPRDYCVQYNETDAAFVSRLMEFEGI YYYFKHAAQTHTLMLCDAMASHVALPGYEHIPFIARDRTAIADEEHIDSWLPAQEVSIGKHETSDYDYTKPRADLSAQKI DPRGHDHDGFASFEWPGGYRDDEPGAHYSRVRLEEQQAEHERALARTDVRGIAPGYLFTLEHCPRADQNREYLIVRCQYR FQENAYATDSGNEAVVHESQTLVQPSSLPYRSPRATPRPRTNGPQTATVVGPKGEEIWTDQYGRVKLQFRWDRYGQSDQN SSCWVRVSSPWAGGGFGGVQIPRIGDEVVVDFLNGDPDQPIVTGRVYNGEKMPPWGLPGSATQSGLLSRSSPGGTAEHSN AFRFEDKKGAEQLWMHAERNFDAETEQDHTLSVGHDHSHSVGNNEMMSVANDRQRSVGQNETVNIGKHRVAQIGGNETHG VAGNRTRQVGQNEAVTIGANREATIGGNHVETVAKDKTETIGQGKTLNVTQHYQTTSKSMKTAVAEHHAEEIGSRTSTIE KAHELNVGGSQSVNVGASHTMSVKNNVHVGAGDQISLVCGDASITLKKDGTIAINGVTVESSASGSHSVRGKTVTSSATG EHTVEGTILKLNP
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81355; Mature: 81224
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVFTLDSLHGDDLKFHRLYGEEALGRMFDFRIEALADNHSLSLKELLGKPVTVRIRQQ CCEEEEECCCCCCCEEEEEHHCHHHHHHHHHHEEEEECCCCCEEHHHHHCCCEEEEEECC DESERHLNGIVARAALVGRRAERHYGYQLIVRPWLWLATRRSDCRIFQNKTVPEIVQDVL CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCEEECCCCHHHHHHHHH GTYGFPIENHLTDTYAPRDYCVQYNETDAAFVSRLMEFEGIYYYFKHAAQTHTLMLCDAM HHCCCCHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHCCCEEEEHHCCCCCEEEHHHHH ASHVALPGYEHIPFIARDRTAIADEEHIDSWLPAQEVSIGKHETSDYDYTKPRADLSAQK HHHHCCCCCCCCCEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHC IDPRGHDHDGFASFEWPGGYRDDEPGAHYSRVRLEEQQAEHERALARTDVRGIAPGYLFT CCCCCCCCCCCEEEECCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCCCEEEE LEHCPRADQNREYLIVRCQYRFQENAYATDSGNEAVVHESQTLVQPSSLPYRSPRATPRP ECCCCCCCCCCCEEEEEEEEEECCCCEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCC RTNGPQTATVVGPKGEEIWTDQYGRVKLQFRWDRYGQSDQNSSCWVRVSSPWAGGGFGGV CCCCCCEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCE QIPRIGDEVVVDFLNGDPDQPIVTGRVYNGEKMPPWGLPGSATQSGLLSRSSPGGTAEHS ECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC NAFRFEDKKGAEQLWMHAERNFDAETEQDHTLSVGHDHSHSVGNNEMMSVANDRQRSVGQ CCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC NETVNIGKHRVAQIGGNETHGVAGNRTRQVGQNEAVTIGANREATIGGNHVETVAKDKTE CCEEECCCCEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEECCCHHHHHHCCCHH TIGQGKTLNVTQHYQTTSKSMKTAVAEHHAEEIGSRTSTIEKAHELNVGGSQSVNVGASH HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCE TMSVKNNVHVGAGDQISLVCGDASITLKKDGTIAINGVTVESSASGSHSVRGKTVTSSAT EEEECCCEEECCCCEEEEEECCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCEEECCCC GEHTVEGTILKLNP CCEEECEEEEEECC >Mature Secondary Structure TRVFTLDSLHGDDLKFHRLYGEEALGRMFDFRIEALADNHSLSLKELLGKPVTVRIRQQ CEEEEECCCCCCCEEEEEHHCHHHHHHHHHHEEEEECCCCCEEHHHHHCCCEEEEEECC DESERHLNGIVARAALVGRRAERHYGYQLIVRPWLWLATRRSDCRIFQNKTVPEIVQDVL CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCEEECCCCHHHHHHHHH GTYGFPIENHLTDTYAPRDYCVQYNETDAAFVSRLMEFEGIYYYFKHAAQTHTLMLCDAM HHCCCCHHHCCCCCCCCHHHEEEECCCHHHHHHHHHHHCCCEEEEHHCCCCCEEEHHHHH ASHVALPGYEHIPFIARDRTAIADEEHIDSWLPAQEVSIGKHETSDYDYTKPRADLSAQK HHHHCCCCCCCCCEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHC IDPRGHDHDGFASFEWPGGYRDDEPGAHYSRVRLEEQQAEHERALARTDVRGIAPGYLFT CCCCCCCCCCCEEEECCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCCCEEEE LEHCPRADQNREYLIVRCQYRFQENAYATDSGNEAVVHESQTLVQPSSLPYRSPRATPRP ECCCCCCCCCCCEEEEEEEEEECCCCEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCC RTNGPQTATVVGPKGEEIWTDQYGRVKLQFRWDRYGQSDQNSSCWVRVSSPWAGGGFGGV CCCCCCEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCE QIPRIGDEVVVDFLNGDPDQPIVTGRVYNGEKMPPWGLPGSATQSGLLSRSSPGGTAEHS ECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC NAFRFEDKKGAEQLWMHAERNFDAETEQDHTLSVGHDHSHSVGNNEMMSVANDRQRSVGQ CCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC NETVNIGKHRVAQIGGNETHGVAGNRTRQVGQNEAVTIGANREATIGGNHVETVAKDKTE CCEEECCCCEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEECCCHHHHHHCCCHH TIGQGKTLNVTQHYQTTSKSMKTAVAEHHAEEIGSRTSTIEKAHELNVGGSQSVNVGASH HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCCE TMSVKNNVHVGAGDQISLVCGDASITLKKDGTIAINGVTVESSASGSHSVRGKTVTSSAT EEEECCCEEECCCCEEEEEECCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCEEECCCC GEHTVEGTILKLNP CCEEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA