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The map label for this gene is lrrA [H]

Identifier: 126447161

GI number: 126447161

Start: 1416589

End: 1417539

Strand: Direct

Name: lrrA [H]

Synonym: BMA10247_A1455

Alternate gene names: 126447161

Gene position: 1416589-1417539 (Clockwise)

Preceding gene: 126447322

Following gene: 126446061

Centisome position: 60.21

GC content: 67.3

Gene sequence:

>951_bases
ATGCAAGCAAGAAAACCGAAGAGCCGTGCGCTCCTCGGCCAGTTGACCGACATGGACCTGCGGCTGCTGCGCGTGTTCAG
GAGCGTCGTCCAGTGCGGCGGGATGGCGGCCGCCGAGCTGGAGCTGAACATCGGCATCTCGACGATCAGCCGGCACGTGA
AGGATCTCGAGACGCGCTTGGGCCTCGTGCTGTGCCGGCGCGGCCGCGCCGGCTTCACGCTCACGCCCGAGGGCCAGACC
GTCTATGAGGAGACGCTGCGGCTGCTCGCGTCGGTCGAGGCGTTCAGGAGCCGCGTGGACGGGATTCACGACCGGATGGG
CGGCGAACTGCAGATCGCCGTGTTCGACAAGACCGCGACGAACCCGCACGCGCGGCTCGGCGACGCGATCGGGCGCTTTC
ACGACGAGGCGCCGGACGTGGCGCTGAATCTGCACGTCGCATCGATCAACGAGGTCGAGCGCGGGATCATCGACGGCAGC
TATCAGGTAGGGATCATTCCCGCGCATCGCAGCTCCGGCAGCCTCGTCTATGCCGATCTCTTCGACGAGCGGATGCTGCT
GTACTGCGGCGCGAGCCACGCGCTGTTCAACGCGCCGCACACGAAGCTCACGTGGCGCCAGGTGCGCGGCTACGCGTTCG
CGGGGCTCGGCTACCACTCGCCGAACATGGAGGTGAGCCATCGCGCGAAGCTCACGCGCAGCGCGACGGCGTCCGATCAG
GAATCGATCGCGACGCTGATCCTCTCGGGGCGGTATCTCGGCTTCCTGCCCGATCACTATGCGGAAAGCTTCGAGGCGAA
GGGGCTGATGCGGCCCGTCGCGCCGCAGCGCTTTCATTATTCATGCCGGTTCGTGAGCCTGCTGCGGCGCTCGCCGCGGC
CGTCGCGCGCGGCGCTGCTGTTTCAGGAATGCCTTGAAATCGCGCATGCGGGGCACCGCGCGAAAGCGTGA

Upstream 100 bases:

>100_bases
GGTCGGCGCGGCGATGCGCGAGTGAATGAAGATGTTGCGCATTGTCGAGTCGGCGAATAGTCTTTTGAATATCGCAATAT
CAATGTTTACTTGAGCATTT

Downstream 100 bases:

>100_bases
GCGCGATTCGATGGGCTGAATCGACGCGCCGATCCGGCGTGCGCGTTCGATATGCGCGCCCGACGTGCCCGACGTGCCCG
ACGCCCCCGTCCGCCCGGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQARKPKSRALLGQLTDMDLRLLRVFRSVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASVEAFRSRVDGIHDRMGGELQIAVFDKTATNPHARLGDAIGRFHDEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYADLFDERMLLYCGASHALFNAPHTKLTWRQVRGYAFAGLGYHSPNMEVSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEAKGLMRPVAPQRFHYSCRFVSLLRRSPRPSRAALLFQECLEIAHAGHRAKA

Sequences:

>Translated_316_residues
MQARKPKSRALLGQLTDMDLRLLRVFRSVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASVEAFRSRVDGIHDRMGGELQIAVFDKTATNPHARLGDAIGRFHDEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYADLFDERMLLYCGASHALFNAPHTKLTWRQVRGYAFAGLGYHSPNMEVSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEAKGLMRPVAPQRFHYSCRFVSLLRRSPRPSRAALLFQECLEIAHAGHRAKA
>Mature_316_residues
MQARKPKSRALLGQLTDMDLRLLRVFRSVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASVEAFRSRVDGIHDRMGGELQIAVFDKTATNPHARLGDAIGRFHDEAPDVALNLHVASINEVERGIIDGS
YQVGIIPAHRSSGSLVYADLFDERMLLYCGASHALFNAPHTKLTWRQVRGYAFAGLGYHSPNMEVSHRAKLTRSATASDQ
ESIATLILSGRYLGFLPDHYAESFEAKGLMRPVAPQRFHYSCRFVSLLRRSPRPSRAALLFQECLEIAHAGHRAKA

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787879, Length=251, Percent_Identity=24.7011952191235, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35032; Mature: 35032

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARKPKSRALLGQLTDMDLRLLRVFRSVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASVEAFRSRVDGIHDRMGGELQIAVFDKTAT
HHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NPHARLGDAIGRFHDEAPDVALNLHVASINEVERGIIDGSYQVGIIPAHRSSGSLVYADL
CCHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEH
FDERMLLYCGASHALFNAPHTKLTWRQVRGYAFAGLGYHSPNMEVSHRAKLTRSATASDQ
HCCEEEEEECCCHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCH
ESIATLILSGRYLGFLPDHYAESFEAKGLMRPVAPQRFHYSCRFVSLLRRSPRPSRAALL
HHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
FQECLEIAHAGHRAKA
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQARKPKSRALLGQLTDMDLRLLRVFRSVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASVEAFRSRVDGIHDRMGGELQIAVFDKTAT
HHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NPHARLGDAIGRFHDEAPDVALNLHVASINEVERGIIDGSYQVGIIPAHRSSGSLVYADL
CCHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEH
FDERMLLYCGASHALFNAPHTKLTWRQVRGYAFAGLGYHSPNMEVSHRAKLTRSATASDQ
HCCEEEEEECCCHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCH
ESIATLILSGRYLGFLPDHYAESFEAKGLMRPVAPQRFHYSCRFVSLLRRSPRPSRAALL
HHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
FQECLEIAHAGHRAKA
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]