| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447158
Identifier: 126447158
GI number: 126447158
Start: 545342
End: 546520
Strand: Direct
Name: 126447158
Synonym: BMA10247_A0600
Alternate gene names: NA
Gene position: 545342-546520 (Clockwise)
Preceding gene: 126447822
Following gene: 126445836
Centisome position: 23.18
GC content: 68.45
Gene sequence:
>1179_bases ATGAAGGGGAGATCTGTCGTGACCATGTTGTCTTCCACGATTCCCGCCGTGCACTCGACGTGCGCGCACGCGCGCGACGC CGTGCGGGAAGTGCATGCTGCGCTCGCGAACTGCGACGCCGAACTGGTGTTGTTCTTCTGCTCGAGCCGCTTCGATCTCG ACGCGCTCGCGGACGAGATGCGCGAGCGGTTTCGCGGCACGCGCGTGATCGGCTGCACGACAGCCGGCGAGATCGGGCCG GCCGGCTACCGCAACGACAGTCTCGTCGCGGTTGCGCTGCCGCGCGCGCTGTTTACCGTCGAAACCGCGCTGCTCGAGGA TCTGCAGACGTTTACGATCGCAAGCGGGCATGCCTGCGCGCTCGACGCGCTGCACGATCTGGAGCGACGCGCGCCGCGCG CGAGCGGCGCGAATTCGTTCGCGCTGCTGTTGATCGACGGATTGTCGGTGCGCGAGGAGCCCGTCACGCGCACGCTGCAG GGCGCGCTCGGCGACATCGCGCTCGTCGGCGGCTCGGCGGCCGACGATCTGCGTTTCGAGCGAACCGCGATCTTCTACGA CGGGCGGTTCCGCGACGATTGCGCGGCGCTGATCGTCGCGTCGACCGCGCTGCCGTTTCGCACGTTCAAGACCCAGCATT TCCGCTGCGGCGCCGAGCGGCTCGTCGTCACGCAGGCGGATGCGGAACGCCGCACCGTCAGCGAGATCAACGGGCTGCCC GCCGCGGAGGAATACGCGCGCCTCATCGGCGCGCGCGTCGAGGATCTCAGCCCCGGCCACTTCGCGGCGGCGCCCGTCGT CGTGCTGATCGACGGCACCGATTACGTGCGATCGATCCAGAAGCTCAACCCGGACGGCAGCCTCACGTTCTACTGCGCGA TCGAGGAGGGCCTCGTGCTGCGCGTGGCGCGCGCGCTCGATCTCGTCGACAACCTGCAGGCGACGTTCGGCGATTTGCGC GACTCGTTCGGCGAGCCGCAGCTCGTGCTCGCGTGGGATTGCATCCTGCGCCATCTCGAGATGATGCAGCGGGGCACGCG CGATACCGCGGCGGAGGTGCTGAAGGCGAACCATGCCGTCGGCTTCAGCACCTACGGCGAACAGTACGGCGGCGTTCACG TGAACCAGACGCTCACCGGCATCGTCTTCAGTCGCGCGCCGGAGCCCGACCGTGGCTGA
Upstream 100 bases:
>100_bases CGAGCCGCCGCGCGGCATGTTGGACTGATACATCACGGCCGGCGACGGCGAACCGCCCCGTGCCCGGCCACGAAGACATC GGCTCGTTCGAAGCCGACTG
Downstream 100 bases:
>100_bases ATCGAGTCTCGTCGACGACGCGTCGGCCGACATCCCCTCCCTGAAGAAGGAGATCGTGCGGTTGAACAAGATCGTGCGCT CGCTGATGGATCGCGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKGRSVVTMLSSTIPAVHSTCAHARDAVREVHAALANCDAELVLFFCSSRFDLDALADEMRERFRGTRVIGCTTAGEIGP AGYRNDSLVAVALPRALFTVETALLEDLQTFTIASGHACALDALHDLERRAPRASGANSFALLLIDGLSVREEPVTRTLQ GALGDIALVGGSAADDLRFERTAIFYDGRFRDDCAALIVASTALPFRTFKTQHFRCGAERLVVTQADAERRTVSEINGLP AAEEYARLIGARVEDLSPGHFAAAPVVVLIDGTDYVRSIQKLNPDGSLTFYCAIEEGLVLRVARALDLVDNLQATFGDLR DSFGEPQLVLAWDCILRHLEMMQRGTRDTAAEVLKANHAVGFSTYGEQYGGVHVNQTLTGIVFSRAPEPDRG
Sequences:
>Translated_392_residues MKGRSVVTMLSSTIPAVHSTCAHARDAVREVHAALANCDAELVLFFCSSRFDLDALADEMRERFRGTRVIGCTTAGEIGP AGYRNDSLVAVALPRALFTVETALLEDLQTFTIASGHACALDALHDLERRAPRASGANSFALLLIDGLSVREEPVTRTLQ GALGDIALVGGSAADDLRFERTAIFYDGRFRDDCAALIVASTALPFRTFKTQHFRCGAERLVVTQADAERRTVSEINGLP AAEEYARLIGARVEDLSPGHFAAAPVVVLIDGTDYVRSIQKLNPDGSLTFYCAIEEGLVLRVARALDLVDNLQATFGDLR DSFGEPQLVLAWDCILRHLEMMQRGTRDTAAEVLKANHAVGFSTYGEQYGGVHVNQTLTGIVFSRAPEPDRG >Mature_392_residues MKGRSVVTMLSSTIPAVHSTCAHARDAVREVHAALANCDAELVLFFCSSRFDLDALADEMRERFRGTRVIGCTTAGEIGP AGYRNDSLVAVALPRALFTVETALLEDLQTFTIASGHACALDALHDLERRAPRASGANSFALLLIDGLSVREEPVTRTLQ GALGDIALVGGSAADDLRFERTAIFYDGRFRDDCAALIVASTALPFRTFKTQHFRCGAERLVVTQADAERRTVSEINGLP AAEEYARLIGARVEDLSPGHFAAAPVVVLIDGTDYVRSIQKLNPDGSLTFYCAIEEGLVLRVARALDLVDNLQATFGDLR DSFGEPQLVLAWDCILRHLEMMQRGTRDTAAEVLKANHAVGFSTYGEQYGGVHVNQTLTGIVFSRAPEPDRG
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42455; Mature: 42455
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRSVVTMLSSTIPAVHSTCAHARDAVREVHAALANCDAELVLFFCSSRFDLDALADEM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHH RERFRGTRVIGCTTAGEIGPAGYRNDSLVAVALPRALFTVETALLEDLQTFTIASGHACA HHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCHHH LDALHDLERRAPRASGANSFALLLIDGLSVREEPVTRTLQGALGDIALVGGSAADDLRFE HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEE RTAIFYDGRFRDDCAALIVASTALPFRTFKTQHFRCGAERLVVTQADAERRTVSEINGLP EEEEEECCCCCHHHHHHHHHHHCCCHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHCCCC AAEEYARLIGARVEDLSPGHFAAAPVVVLIDGTDYVRSIQKLNPDGSLTFYCAIEEGLVL CHHHHHHHHHCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCHHH RVARALDLVDNLQATFGDLRDSFGEPQLVLAWDCILRHLEMMQRGTRDTAAEVLKANHAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GFSTYGEQYGGVHVNQTLTGIVFSRAPEPDRG CCCCCCHHHCCEEECCHHEEHEEECCCCCCCC >Mature Secondary Structure MKGRSVVTMLSSTIPAVHSTCAHARDAVREVHAALANCDAELVLFFCSSRFDLDALADEM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHH RERFRGTRVIGCTTAGEIGPAGYRNDSLVAVALPRALFTVETALLEDLQTFTIASGHACA HHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCHHH LDALHDLERRAPRASGANSFALLLIDGLSVREEPVTRTLQGALGDIALVGGSAADDLRFE HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEE RTAIFYDGRFRDDCAALIVASTALPFRTFKTQHFRCGAERLVVTQADAERRTVSEINGLP EEEEEECCCCCHHHHHHHHHHHCCCHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHCCCC AAEEYARLIGARVEDLSPGHFAAAPVVVLIDGTDYVRSIQKLNPDGSLTFYCAIEEGLVL CHHHHHHHHHCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCHHH RVARALDLVDNLQATFGDLRDSFGEPQLVLAWDCILRHLEMMQRGTRDTAAEVLKANHAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GFSTYGEQYGGVHVNQTLTGIVFSRAPEPDRG CCCCCCHHHCCEEECCHHEEHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA