Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126447033

Identifier: 126447033

GI number: 126447033

Start: 2298226

End: 2298966

Strand: Reverse

Name: 126447033

Synonym: BMA10247_A2369

Alternate gene names: NA

Gene position: 2298966-2298226 (Counterclockwise)

Preceding gene: 126446173

Following gene: 126447954

Centisome position: 97.72

GC content: 65.99

Gene sequence:

>741_bases
TTGCATATCCCTTTTGAACGCGACGGCGACTTGATGGATATCGGGAGCTATCCACACTGGCTGCAGGACGTGGTCGGCAC
GGTGCGCGCCGCGCGCGACCGCGTGCGCTTTCACGAAGTGTTCTCGCTGATGCGCGACAGCCGCCTCGCGCCGCGGCAGC
TCGCCGCGTTCTTCGTGAACGGCTGGCCTGTCGTCGAGCAGTTCCCGAAGTACATGTCGATGAACCTGCTGAAGGCGAAC
GGCACGAACTCGTCCGGCGAAGAGAAGGCGCGCCGCTATCTGATCCGCAACATCCGCGTCGAGCTGAACCACGTCGAGCA
CTGGGTGAACTGGGCGGAGGCGAGCGGCGTGCCGCGCCGGCAACTGACCGACGGCGACAGCCCGCCCGCCGCGCTCGCGC
TCAGCCACTGGTGCTGGAAGAGCAGCAGCGCGGATACGCTCGCGGCGAGCATCGCGGCCACCAACTATGCGATCGAAGGC
GTGACGGGCGAATGGAGCGCGGACCTGTGCCGCTCGGACGTCTACGAAATGGGCTTCCCCGAGGCGGTGCGCGGCCGCGC
GATGCGCTGGCTGAGATTGCATTCGAGCTACGACGACAAGCATCCGTGGGAAGCGCTCGACATCGTCGCGACGATTCTCG
GTCAATCGCCGAGCACCGAACAGGTGCGAGACGTCGCGGCCGGCATCGAGCGCAGCTTCCGCTACTTCGAAATGAGCCTG
TCCTGCTGCCTCGACGCGTGA

Upstream 100 bases:

>100_bases
CGGCATCGATTTCTGCCAGGGATATTTCTTTGCTCAGCCTTCGCCGTGGCGCGAGGGCGGCTATTGACGTGGTTCGATGA
CTTTATCTAAGGAGAGGAAA

Downstream 100 bases:

>100_bases
GCCTCGTGCGTCGTCGTCAGGCGAAGGGCGCAGGGGGCGCCGCCCGCGACGGCGAGGCGAGCGCGCGGCGCTTCGGCTCG
CTCGCGAGCGCATGCGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN
GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG
VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL
SCCLDA

Sequences:

>Translated_246_residues
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN
GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG
VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL
SCCLDA
>Mature_246_residues
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN
GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG
VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL
SCCLDA

Specific function: Unknown

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27892; Mature: 27892

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVN
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GWPVVEQFPKYMSMNLLKANGTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRR
CCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEGVTGEWSADLCRSDVYEMGFP
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
EAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SCCLDA
HHHCCC
>Mature Secondary Structure
MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVN
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GWPVVEQFPKYMSMNLLKANGTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRR
CCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEGVTGEWSADLCRSDVYEMGFP
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC
EAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SCCLDA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA