| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447033
Identifier: 126447033
GI number: 126447033
Start: 2298226
End: 2298966
Strand: Reverse
Name: 126447033
Synonym: BMA10247_A2369
Alternate gene names: NA
Gene position: 2298966-2298226 (Counterclockwise)
Preceding gene: 126446173
Following gene: 126447954
Centisome position: 97.72
GC content: 65.99
Gene sequence:
>741_bases TTGCATATCCCTTTTGAACGCGACGGCGACTTGATGGATATCGGGAGCTATCCACACTGGCTGCAGGACGTGGTCGGCAC GGTGCGCGCCGCGCGCGACCGCGTGCGCTTTCACGAAGTGTTCTCGCTGATGCGCGACAGCCGCCTCGCGCCGCGGCAGC TCGCCGCGTTCTTCGTGAACGGCTGGCCTGTCGTCGAGCAGTTCCCGAAGTACATGTCGATGAACCTGCTGAAGGCGAAC GGCACGAACTCGTCCGGCGAAGAGAAGGCGCGCCGCTATCTGATCCGCAACATCCGCGTCGAGCTGAACCACGTCGAGCA CTGGGTGAACTGGGCGGAGGCGAGCGGCGTGCCGCGCCGGCAACTGACCGACGGCGACAGCCCGCCCGCCGCGCTCGCGC TCAGCCACTGGTGCTGGAAGAGCAGCAGCGCGGATACGCTCGCGGCGAGCATCGCGGCCACCAACTATGCGATCGAAGGC GTGACGGGCGAATGGAGCGCGGACCTGTGCCGCTCGGACGTCTACGAAATGGGCTTCCCCGAGGCGGTGCGCGGCCGCGC GATGCGCTGGCTGAGATTGCATTCGAGCTACGACGACAAGCATCCGTGGGAAGCGCTCGACATCGTCGCGACGATTCTCG GTCAATCGCCGAGCACCGAACAGGTGCGAGACGTCGCGGCCGGCATCGAGCGCAGCTTCCGCTACTTCGAAATGAGCCTG TCCTGCTGCCTCGACGCGTGA
Upstream 100 bases:
>100_bases CGGCATCGATTTCTGCCAGGGATATTTCTTTGCTCAGCCTTCGCCGTGGCGCGAGGGCGGCTATTGACGTGGTTCGATGA CTTTATCTAAGGAGAGGAAA
Downstream 100 bases:
>100_bases GCCTCGTGCGTCGTCGTCAGGCGAAGGGCGCAGGGGGCGCCGCCCGCGACGGCGAGGCGAGCGCGCGGCGCTTCGGCTCG CTCGCGAGCGCATGCGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL SCCLDA
Sequences:
>Translated_246_residues MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL SCCLDA >Mature_246_residues MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVNGWPVVEQFPKYMSMNLLKAN GTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRRQLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEG VTGEWSADLCRSDVYEMGFPEAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL SCCLDA
Specific function: Unknown
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27892; Mature: 27892
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVN CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GWPVVEQFPKYMSMNLLKANGTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRR CCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEGVTGEWSADLCRSDVYEMGFP CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC EAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SCCLDA HHHCCC >Mature Secondary Structure MHIPFERDGDLMDIGSYPHWLQDVVGTVRAARDRVRFHEVFSLMRDSRLAPRQLAAFFVN CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GWPVVEQFPKYMSMNLLKANGTNSSGEEKARRYLIRNIRVELNHVEHWVNWAEASGVPRR CCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QLTDGDSPPAALALSHWCWKSSSADTLAASIAATNYAIEGVTGEWSADLCRSDVYEMGFP CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC EAVRGRAMRWLRLHSSYDDKHPWEALDIVATILGQSPSTEQVRDVAAGIERSFRYFEMSL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SCCLDA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA