| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446911
Identifier: 126446911
GI number: 126446911
Start: 398380
End: 399888
Strand: Direct
Name: 126446911
Synonym: BMA10247_A0454
Alternate gene names: NA
Gene position: 398380-399888 (Clockwise)
Preceding gene: 126447080
Following gene: 126447416
Centisome position: 16.93
GC content: 65.87
Gene sequence:
>1509_bases ATGAATGAACGTGCCCAAACCCAGGCCGACACGCGCGCCGCCGCCCAGCCCGTGGTCGCGCGCGACGAGTTCGCCGCGCT GCTGCAAAAGGAGTTCAAGCCGAAGACGGCGGAGGCGCGCGAATCGGTCGAGCGCGCGGTGCGCACGCTCGCGCAGCAGG CGCTCGAGCACACGGTCGGCATGACGACCGACGCTTACGGCAGCGTCAAGCAGATCATCGCCGAGATCGACCGCAAGCTC TCCGAGCAGATCAACCTGATCCTGCATCATCAGGAGTTCCAGACGCTCGAAGGCGCGTGGCGCGGCCTGCACTACCTCGT CACGAACACCGAGACCGACGAGCTGCTGAAGATCAAGGCACTGCCCGCGTCGCGCAACGAGCTCGCGCGCACACTCAAGC GCTACAAGGGCGTCGCGTGGGATCAGAGCCCGCTGTTTCGCAAGGTCTACGAAGAAGAGTACGGCCAGTTCGGCGGCGAG CCGTTCGGCTGCCTCGTCGGCGATTTCCATTTCAACCACAGTCCGCCCGACGTCGAGATGCTCGGCGAGCTGTCGAAGAT CGCGGCGGCCGCGCATGCGCCGTTCATCGCGGGCGCGTCGCCCGAGCTGATGCAGATGGATTCGTGGCAGGAGCTCGCCA ATCCGCGTGATCTGACGAAGATCTTCCAGAACACCGAATACGCCGCGTGGCGCAGCCTGCGCCAGTCCGAGGATTCGCGC TACGTCGGGCTCGCGATGCCGCGCTTTCTCGCGCGGCTGCCGTACGGCGCGCGCACGAATCCCGTCGACGAATTCGACTT CGAGGAGGATACCGGCGCCGCGAGCCACGACCGCTACACGTGGGCGAATTCCGCGTACGCGATGGCGGCGAACATCAACC GCTCGTTCAAGCTGTACGGCTGGTGCTCGTCGATCCGCGGCGTCGAATCGGGCGGCGCGGTGCAAGGGCTGCCGTGCCAC ACGTTCCCCACCGACGACGGCGGCGTCGACCAGAAATGCCCGACCGAGATCGCGATCAGCGACCGCCGCGAGGCCGAGCT CGCGAAGAACGGCTTCATGCCGTTCGTACATCGAAAGAATTCGGATTTCGCGGCGTTCATCGGCGCGCAGTCGCTGTATC AGCCCGCCGAGTATCACGATCCCGACGCGACCGCGAACGCGCGGCTCTCGGGCCGCCTGCCGTACCTGTTCGCGTGCTGC CGCTTCGCGCATTACCTGAAGTGCATCGTGCGCGACAAGATCGGCTCGTTTCGCGAGCGCGACGACATGGAGCGCTGGCT CAACGACTGGATCATGAACTACGTCGACGGCGATCCGGCGAACTCGTCGCAGGAGACGAAGGCGCGCAAGCCGCTCGCGG CCGCGCAGGTCGTCGTCGAGGAGATCGACGACAACCCCGGCTATTACGCGTCGAAATTCTTCCTGCGGCCGCATTACCAG CTGGAAGGGCTCACCGTGTCGCTGCGGCTCATCTCGAAGCTGCCGTCGGCGAAGGCGGCGGGCGAATGA
Upstream 100 bases:
>100_bases GCACTGCTGGCCTCGCTCGTGCGGCAGCCGCTCGCGGCGGACGCCGAAGGCGGCGCGCGGCAGCCCGTGACCGGCACCGA AGACGACCCGGAGATTCGCC
Downstream 100 bases:
>100_bases GCGGCAAACGCTCGGGATTGGACTGACACATTCCGCAATCAACCACAACGGAGACAGCGATGGGCGTCGCAATGTTTATG AAAGTGGACGGCGTCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVGMTTDAYGSVKQIIAEIDRKL SEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKALPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGE PFGCLVGDFHFNHSPPDVEMLGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYGWCSSIRGVESGGAVQGLPCH TFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKNSDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACC RFAHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ LEGLTVSLRLISKLPSAKAAGE
Sequences:
>Translated_502_residues MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVGMTTDAYGSVKQIIAEIDRKL SEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKALPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGE PFGCLVGDFHFNHSPPDVEMLGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYGWCSSIRGVESGGAVQGLPCH TFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKNSDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACC RFAHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ LEGLTVSLRLISKLPSAKAAGE >Mature_502_residues MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVGMTTDAYGSVKQIIAEIDRKL SEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKALPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGE PFGCLVGDFHFNHSPPDVEMLGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYGWCSSIRGVESGGAVQGLPCH TFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKNSDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACC RFAHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ LEGLTVSLRLISKLPSAKAAGE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56441; Mature: 56441
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MTTDAYGSVKQIIAEIDRKLSEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE LPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGEPFGCLVGDFHFNHSPPDVEM CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHH LGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR HHHHHHHHHHHCCCEECCCCHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCC YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYG EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEE WCSSIRGVESGGAVQGLPCHTFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKN EHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEECCC SDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACCRFAHYLKCIVRDKIGSFRER CCHHHHHCHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEE LEGLTVSLRLISKLPSAKAAGE ECCCEEHHHHHHHCCCCCCCCC >Mature Secondary Structure MNERAQTQADTRAAAQPVVARDEFAALLQKEFKPKTAEARESVERAVRTLAQQALEHTVG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MTTDAYGSVKQIIAEIDRKLSEQINLILHHQEFQTLEGAWRGLHYLVTNTETDELLKIKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEE LPASRNELARTLKRYKGVAWDQSPLFRKVYEEEYGQFGGEPFGCLVGDFHFNHSPPDVEM CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHH LGELSKIAAAAHAPFIAGASPELMQMDSWQELANPRDLTKIFQNTEYAAWRSLRQSEDSR HHHHHHHHHHHCCCEECCCCHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCC YVGLAMPRFLARLPYGARTNPVDEFDFEEDTGAASHDRYTWANSAYAMAANINRSFKLYG EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEE WCSSIRGVESGGAVQGLPCHTFPTDDGGVDQKCPTEIAISDRREAELAKNGFMPFVHRKN EHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEECCC SDFAAFIGAQSLYQPAEYHDPDATANARLSGRLPYLFACCRFAHYLKCIVRDKIGSFRER CCHHHHHCHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAQVVVEEIDDNPGYYASKFFLRPHYQ HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEE LEGLTVSLRLISKLPSAKAAGE ECCCEEHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA