| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446829
Identifier: 126446829
GI number: 126446829
Start: 270764
End: 271651
Strand: Reverse
Name: 126446829
Synonym: BMA10247_A0310
Alternate gene names: NA
Gene position: 271651-270764 (Counterclockwise)
Preceding gene: 126446227
Following gene: 126445816
Centisome position: 11.55
GC content: 58.67
Gene sequence:
>888_bases ATGGCTCGAAATCGTACAGTGTTGCCTCTCGAACGCGCGCAAGTGGACGTGGTGCAGGAACGCAGCGGCGTCGTCGGCGA TAGGCGAATATCGCTCAGGGTGTGCGGAGAGGCGACTCAGGGATATTTGCTAGAGCGATACCATGCGGCGCCGGGCGAGC CTTCGTTCGTCCAACGCGTGAATCTGTTCGACGACGCGACCATTGCATCGTTCGTCGAACACGATCCTTATTCCGCGGAA CTGGAAAGCTTGTACCGTGCGGTCATAGACGTGCCGAAAAAAGCATTGAAATTCGCTGGACGCGAAACGATTCAACCCGA ATTCGCATCGGAATGCGTGAGCGAGAGCGGTTTATTGACCGTGATGCGCAATACGATACTGGAATGTGGCGCAACGAACT GTTTTTACCATTACTTCAGGATAGACGAGAAAACCGGAAATCTGAAGAATCACGAATTATTGATCGGCGGAACGCCCGTA TGGTCGCACCGTTATGTGCATCGCCATTGGTATCTGAATGATCCCGCGATGGCGCACGCGCGCAACGATACGCGCCCGCT GCGCGCATCGACGCTCGCCCCGCTGCCGCACGATCACTGGCTGAACCAGCAGGCGCAATTTCTCGGCCTGACCAGCAATG TGTTTTTCCCTGCGCATCGTCGCGACGACGACACGATCGGTTTGTTGCACGTGAGCTCGTCGCTGCCCGCCGCGCAAGGC GAGGAAATCATCTGGCGCAACCGGCGCACGCTGCGCGGCCTCGCCACCGAGATGCTCGAATGGAAAGTCACGGCGCAGCG CAACACGCTTGCCCGCGAGATGTCGCTCAGCCATCACGAGCTCGTCGCGCTGCGACTCGTCGGCAGGGTGACCTGCCCCC TTCGATAG
Upstream 100 bases:
>100_bases ACGATTTGTTGGCGGGCCTTTCCCCATCGGCCCGGCGCTCCGTTTGGTCGCGGCGATTCGTCATGAAATCCGGCAGTCCC CGAAGCATGGCTTGGCGCGT
Downstream 100 bases:
>100_bases GGCCAATGGGCTTCTAGCAAAGTCCCTTTAAACCAACTCCTGGAAAGCGGCAGGAGCGTCCGCGGTTGCCCGATGTTTCG CCGCAAACTCTGACGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MARNRTVLPLERAQVDVVQERSGVVGDRRISLRVCGEATQGYLLERYHAAPGEPSFVQRVNLFDDATIASFVEHDPYSAE LESLYRAVIDVPKKALKFAGRETIQPEFASECVSESGLLTVMRNTILECGATNCFYHYFRIDEKTGNLKNHELLIGGTPV WSHRYVHRHWYLNDPAMAHARNDTRPLRASTLAPLPHDHWLNQQAQFLGLTSNVFFPAHRRDDDTIGLLHVSSSLPAAQG EEIIWRNRRTLRGLATEMLEWKVTAQRNTLAREMSLSHHELVALRLVGRVTCPLR
Sequences:
>Translated_295_residues MARNRTVLPLERAQVDVVQERSGVVGDRRISLRVCGEATQGYLLERYHAAPGEPSFVQRVNLFDDATIASFVEHDPYSAE LESLYRAVIDVPKKALKFAGRETIQPEFASECVSESGLLTVMRNTILECGATNCFYHYFRIDEKTGNLKNHELLIGGTPV WSHRYVHRHWYLNDPAMAHARNDTRPLRASTLAPLPHDHWLNQQAQFLGLTSNVFFPAHRRDDDTIGLLHVSSSLPAAQG EEIIWRNRRTLRGLATEMLEWKVTAQRNTLAREMSLSHHELVALRLVGRVTCPLR >Mature_294_residues ARNRTVLPLERAQVDVVQERSGVVGDRRISLRVCGEATQGYLLERYHAAPGEPSFVQRVNLFDDATIASFVEHDPYSAEL ESLYRAVIDVPKKALKFAGRETIQPEFASECVSESGLLTVMRNTILECGATNCFYHYFRIDEKTGNLKNHELLIGGTPVW SHRYVHRHWYLNDPAMAHARNDTRPLRASTLAPLPHDHWLNQQAQFLGLTSNVFFPAHRRDDDTIGLLHVSSSLPAAQGE EIIWRNRRTLRGLATEMLEWKVTAQRNTLAREMSLSHHELVALRLVGRVTCPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33556; Mature: 33424
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNRTVLPLERAQVDVVQERSGVVGDRRISLRVCGEATQGYLLERYHAAPGEPSFVQRV CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCHHHHHC NLFDDATIASFVEHDPYSAELESLYRAVIDVPKKALKFAGRETIQPEFASECVSESGLLT CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCCHHH VMRNTILECGATNCFYHYFRIDEKTGNLKNHELLIGGTPVWSHRYVHRHWYLNDPAMAHA HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCHHHHC RNDTRPLRASTLAPLPHDHWLNQQAQFLGLTSNVFFPAHRRDDDTIGLLHVSSSLPAAQG CCCCCCCCHHCCCCCCCHHHCCCHHHHEECCCCEEECCCCCCCCCEEEEEECCCCCCCCC EEIIWRNRRTLRGLATEMLEWKVTAQRNTLAREMSLSHHELVALRLVGRVTCPLR CHHHHHCHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARNRTVLPLERAQVDVVQERSGVVGDRRISLRVCGEATQGYLLERYHAAPGEPSFVQRV CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCHHHHHC NLFDDATIASFVEHDPYSAELESLYRAVIDVPKKALKFAGRETIQPEFASECVSESGLLT CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCCHHH VMRNTILECGATNCFYHYFRIDEKTGNLKNHELLIGGTPVWSHRYVHRHWYLNDPAMAHA HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCHHHHC RNDTRPLRASTLAPLPHDHWLNQQAQFLGLTSNVFFPAHRRDDDTIGLLHVSSSLPAAQG CCCCCCCCHHCCCCCCCHHHCCCHHHHEECCCCEEECCCCCCCCCEEEEEECCCCCCCCC EEIIWRNRRTLRGLATEMLEWKVTAQRNTLAREMSLSHHELVALRLVGRVTCPLR CHHHHHCHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA