| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is yjhP [C]
Identifier: 126446817
GI number: 126446817
Start: 1347204
End: 1348193
Strand: Reverse
Name: yjhP [C]
Synonym: BMA10247_A1380
Alternate gene names: 126446817
Gene position: 1348193-1347204 (Counterclockwise)
Preceding gene: 126447494
Following gene: 126445910
Centisome position: 57.3
GC content: 68.38
Gene sequence:
>990_bases ATGCAAAACGTCGATCGTCCGACCGGTTCTTCACTCGCGGGTGCCGCCATTCTGCTGGAAATCGGCGCCGCATACGGCAT CGTCGATTTCATCCGGCATTCGAACGGTTTCGACGTGGCCGCGCTCGCCGAGCGCAGCGGAATCGGCGAGCCGATGATCG CCGACTATGTCGATGCGATGCGCGAGGCCGGGCTCGTCACGCTCGCGAAGGCGGGCGAGCGCGACATCTACCGGCCGGCC GACGATTTTCCCGACGTCGTCAACGATGTCGGCTACCTGTCGTGGGCGCTGCTCGCATGCGCGCCGCTGATCGTCAACGC GCGCGAATTCGCTGCCGACAATGCGCTCGCGCAGGCGCGCCATCCGCGCGACGGCGGGCTCGTCGCGCGCACGTCGAAAT GGATGGGCGAGCTGTCGTTCTATCCGCAGCCCGAGCGCGCGATCCTGAAGCTGCGGCCGAAAAAGATCGTCGACCTCGGG TCCGGCTCGGGCGGCTTCCTGATCCGGATGCTGCATCAGCTCGACGGCGCGCGCGGCGTCGGCGTCGATCTCAGCGCGAC GGCCACCGAGCAGGCGAAGCAGGCAGCCGAAGCGAACGGCTTCGCCGGGCGGCTCGAATTCCTGCATCGGCCGATCCAGT CGCTCGTCGACGATCCGGCGCCGCTCAAGGGCGCGGACGTCGTGCACGCGGGCTTCGTGATGCACGATCTGCTGCCCGCC GAGGAGCGCACGCTCGACGCGCTGCTCGAAACGTGCCGCGAGCACGCGTCGAGCGGCACCGTCGTGATCGTCGACGCGGT GCCGCTCGCGCCCGACCGGTGGGAGCGTTCGTTCGCCGCGGCCTTCAATCACCTGCACCGCAACTTCATGTCGCGCCGGC TGCTGAGCGAGGACGCGTGGCGGGAGAAATTCGAGCAGGCGGGGTTCGGAAACGTCGCCGTCGAAACGCTCGGCCACCCC GGTGGCCGGATGATTCTGGGGAGCGCTTGA
Upstream 100 bases:
>100_bases CAGAATCGGCGCGTTTCAATTTCATCCAATACAGCCAATTAAGGCGGACATAGTTTTGCGCCGAGGGTTGTGCAATTTAA AAACTCGAAAAGGGGTTGCC
Downstream 100 bases:
>100_bases GGAGATGTTCTTCGTTGTCTTGGGCCGATGTGATGTAGTCACTTCCGAGGAGTGTGTCATGCCGATCACTGTCGATGAAC TGGTTCAGAAAGTCAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPA DDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPRDGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLG SGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPA EERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHP GGRMILGSA
Sequences:
>Translated_329_residues MQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPA DDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPRDGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLG SGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPA EERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHP GGRMILGSA >Mature_329_residues MQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPA DDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPRDGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLG SGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPA EERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHP GGRMILGSA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35428; Mature: 35428
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH REAGLVTLAKAGERDIYRPADDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQAR HHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPRDGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGV CCCCCCEEEHHHHHHHHCCCCCCCHHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCC GVDLSATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPA CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC EERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAW HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKFEQAGFGNVAVETLGHPGGRMILGSA HHHHHHCCCCCEEHHHCCCCCCCEEECCC >Mature Secondary Structure MQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH REAGLVTLAKAGERDIYRPADDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQAR HHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPRDGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGV CCCCCCEEEHHHHHHHHCCCCCCCHHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCC GVDLSATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPA CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC EERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAW HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKFEQAGFGNVAVETLGHPGGRMILGSA HHHHHHCCCCCEEHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA