| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446773
Identifier: 126446773
GI number: 126446773
Start: 174404
End: 175843
Strand: Reverse
Name: 126446773
Synonym: BMA10247_A0204
Alternate gene names: NA
Gene position: 175843-174404 (Counterclockwise)
Preceding gene: 126447554
Following gene: 126447309
Centisome position: 7.47
GC content: 68.4
Gene sequence:
>1440_bases ATGCGACGCAATGCCTTGCCTGTCTCGTTTGTCTCCGGAATCGCCGCGGCCGCGGCCCTTGCGATGTCCGCCGCCGCGCA CGGCGCGCCCGTGCTCGTTTCCGGCCCGAGCCCATTCGCCGGTTGCACGATCGGCGGCCCCGGCGTCAACTATGTGAACG CGGAAGTCGAACCGTGGGTCGCCGTGAATCCCGCGAATCCCTCCAACGTGATCGGCGCGTGGCAGCAGGACCGCTGGTCG AACGGCGGCGCGCACGGGCTCGTCGCCGGCTATTCGTTCGACGGCGGCCTCACGTGGAAACAGACGAACCTGCCGTTCAG CGCATGCGCGGGCGGCCTCGCGTACGAGCGCGCGTCCGATCCGTGGGTGTCGATCGGGCCCGACGGCACCGCGTATTCGG TGTCGATCTCGTTCAACCAGTCGAACAACAGCAACGCGGTCGCGGCGTCGGTCTCGACGGACGGCGGCCAGACCTGGAGC GCGCCGACACTGCTCATCGCCGACAACGAGCCGACCACGCAGTTCTTCAACGACAAGGAATCGGTGAGCGCGAACCCGAC GAAGGCCGGCACCGCGTACGCGGTATGGGACCGGCTCGAGCAACCGACCGGCAACCCGCACGCGAACCTGCACACCGCCG CGTCTCGCGGGCCGAGCTACTTTTCGAAGACCGTCGACGGCGGCAAGACATGGAGCGCGCCGAGCGTGATCGTCGACGTG CCGTCCCGCCAGCAGACGATCGGCAACCAGATCGTCGTCGATCGCAAGACGGGCACGCTGTACGATTTCTTCGACCTGAT CCAGCCGCCGTTCAGCGCGGCCGCGGGCAAGGTCGCGTTCATCAAGTCGACCGACGACGGCGCGACGTGGACGAAGCCGC AAATCGTGTCGGGCCTGCAGACGGTGTCCGTCACCGATCCGAATACGAACGAACCGGTTCGCACGGGCGACATCATCCCC GAGCCCGCGATCGATCCCGCGACGGGCCAGCTGTACGTCGTCTGGCAGGACTCGCGCTTCAACGGCGGCCTGTACGACGA GATCGCGCTGTCGACGTCGTCCGACGGCGGCGCGACGTGGAGCGCGCCGCTGCGCGTGAACACGCCGAGCGGGCGGCCCG CGTTCAATCCGTCGGTGCGGGTGAACTCGGCGGGCGTCGTCGCGGTCACCTATTACGACTTCCGCGATCTGCAGCCCGGC AACACGACGACGCTGCCGACCCACTACTGGCGCACGCTGTCGAGCGACGGCGGCCGCACGTTCGGCACCGAGCGGCGCAT CGCCGGCCCGTTCGACATGCGCACCGCGCCCGTCGCCGAAGGCTTCTTCATCGGCGATTACGCGGGGCTCGACACGCGCG GCACGTCGTTCCTGCCGTTCTTCGTGCAAACGAACTCGGGCAACACGGCGAACCGCACCGACGTGTTCGCCGCGCCGTAA
Upstream 100 bases:
>100_bases GGCGAGCCGATGCGACCGTGCCGACCGAGGGGCGGCCCGCGCGCGCTCGCGCCGCTTGGATTCGGCAGTCGCGGCCGCTG CTCACCAAGGAGAGTTGTCC
Downstream 100 bases:
>100_bases GCGGGCGCGCCCACGCGACGCGCGCAGGCCGCGCGCCTGCGTCACGGCGCTCGCGGCGCGGCACGACGCAACGCAACGCC TGGCGCGCCGTGCGCCGTGC
Product: BNR/Asp-box repeat-containing protein
Products: NA
Alternate protein names: Neuraminidase; BNR/Asp-Box Repeat Protein
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MRRNALPVSFVSGIAAAAALAMSAAAHGAPVLVSGPSPFAGCTIGGPGVNYVNAEVEPWVAVNPANPSNVIGAWQQDRWS NGGAHGLVAGYSFDGGLTWKQTNLPFSACAGGLAYERASDPWVSIGPDGTAYSVSISFNQSNNSNAVAASVSTDGGQTWS APTLLIADNEPTTQFFNDKESVSANPTKAGTAYAVWDRLEQPTGNPHANLHTAASRGPSYFSKTVDGGKTWSAPSVIVDV PSRQQTIGNQIVVDRKTGTLYDFFDLIQPPFSAAAGKVAFIKSTDDGATWTKPQIVSGLQTVSVTDPNTNEPVRTGDIIP EPAIDPATGQLYVVWQDSRFNGGLYDEIALSTSSDGGATWSAPLRVNTPSGRPAFNPSVRVNSAGVVAVTYYDFRDLQPG NTTTLPTHYWRTLSSDGGRTFGTERRIAGPFDMRTAPVAEGFFIGDYAGLDTRGTSFLPFFVQTNSGNTANRTDVFAAP
Sequences:
>Translated_479_residues MRRNALPVSFVSGIAAAAALAMSAAAHGAPVLVSGPSPFAGCTIGGPGVNYVNAEVEPWVAVNPANPSNVIGAWQQDRWS NGGAHGLVAGYSFDGGLTWKQTNLPFSACAGGLAYERASDPWVSIGPDGTAYSVSISFNQSNNSNAVAASVSTDGGQTWS APTLLIADNEPTTQFFNDKESVSANPTKAGTAYAVWDRLEQPTGNPHANLHTAASRGPSYFSKTVDGGKTWSAPSVIVDV PSRQQTIGNQIVVDRKTGTLYDFFDLIQPPFSAAAGKVAFIKSTDDGATWTKPQIVSGLQTVSVTDPNTNEPVRTGDIIP EPAIDPATGQLYVVWQDSRFNGGLYDEIALSTSSDGGATWSAPLRVNTPSGRPAFNPSVRVNSAGVVAVTYYDFRDLQPG NTTTLPTHYWRTLSSDGGRTFGTERRIAGPFDMRTAPVAEGFFIGDYAGLDTRGTSFLPFFVQTNSGNTANRTDVFAAP >Mature_479_residues MRRNALPVSFVSGIAAAAALAMSAAAHGAPVLVSGPSPFAGCTIGGPGVNYVNAEVEPWVAVNPANPSNVIGAWQQDRWS NGGAHGLVAGYSFDGGLTWKQTNLPFSACAGGLAYERASDPWVSIGPDGTAYSVSISFNQSNNSNAVAASVSTDGGQTWS APTLLIADNEPTTQFFNDKESVSANPTKAGTAYAVWDRLEQPTGNPHANLHTAASRGPSYFSKTVDGGKTWSAPSVIVDV PSRQQTIGNQIVVDRKTGTLYDFFDLIQPPFSAAAGKVAFIKSTDDGATWTKPQIVSGLQTVSVTDPNTNEPVRTGDIIP EPAIDPATGQLYVVWQDSRFNGGLYDEIALSTSSDGGATWSAPLRVNTPSGRPAFNPSVRVNSAGVVAVTYYDFRDLQPG NTTTLPTHYWRTLSSDGGRTFGTERRIAGPFDMRTAPVAEGFFIGDYAGLDTRGTSFLPFFVQTNSGNTANRTDVFAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50404; Mature: 50404
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNALPVSFVSGIAAAAALAMSAAAHGAPVLVSGPSPFAGCTIGGPGVNYVNAEVEPWV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEEECCCCCEE AVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTWKQTNLPFSACAGGLAYERASD EECCCCCCHHEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCEECCCCC PWVSIGPDGTAYSVSISFNQSNNSNAVAASVSTDGGQTWSAPTLLIADNEPTTQFFNDKE CEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCEEEEECCCCCHHHCCCCC SVSANPTKAGTAYAVWDRLEQPTGNPHANLHTAASRGPSYFSKTVDGGKTWSAPSVIVDV CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHCCCCHHHHHCCCCCCCCCCCEEEEEC PSRQQTIGNQIVVDRKTGTLYDFFDLIQPPFSAAAGKVAFIKSTDDGATWTKPQIVSGLQ CCHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHCCCEEEEEEECCCCCCCCCHHHHCCEE TVSVTDPNTNEPVRTGDIIPEPAIDPATGQLYVVWQDSRFNGGLYDEIALSTSSDGGATW EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEE SAPLRVNTPSGRPAFNPSVRVNSAGVVAVTYYDFRDLQPGNTTTLPTHYWRTLSSDGGRT ECCEEEECCCCCCCCCCCEEECCCCEEEEEEECCEECCCCCCCCCCHHHHHHHCCCCCCC FGTERRIAGPFDMRTAPVAEGFFIGDYAGLDTRGTSFLPFFVQTNSGNTANRTDVFAAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MRRNALPVSFVSGIAAAAALAMSAAAHGAPVLVSGPSPFAGCTIGGPGVNYVNAEVEPWV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEEECCCCCEE AVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTWKQTNLPFSACAGGLAYERASD EECCCCCCHHEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHCCCCEECCCCC PWVSIGPDGTAYSVSISFNQSNNSNAVAASVSTDGGQTWSAPTLLIADNEPTTQFFNDKE CEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCEEEEECCCCCHHHCCCCC SVSANPTKAGTAYAVWDRLEQPTGNPHANLHTAASRGPSYFSKTVDGGKTWSAPSVIVDV CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEHHCCCCHHHHHCCCCCCCCCCCEEEEEC PSRQQTIGNQIVVDRKTGTLYDFFDLIQPPFSAAAGKVAFIKSTDDGATWTKPQIVSGLQ CCHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHCCCEEEEEEECCCCCCCCCHHHHCCEE TVSVTDPNTNEPVRTGDIIPEPAIDPATGQLYVVWQDSRFNGGLYDEIALSTSSDGGATW EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEE SAPLRVNTPSGRPAFNPSVRVNSAGVVAVTYYDFRDLQPGNTTTLPTHYWRTLSSDGGRT ECCEEEECCCCCCCCCCCEEECCCCEEEEEEECCEECCCCCCCCCCHHHHHHHCCCCCCC FGTERRIAGPFDMRTAPVAEGFFIGDYAGLDTRGTSFLPFFVQTNSGNTANRTDVFAAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA