| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is bpmI [H]
Identifier: 126446745
GI number: 126446745
Start: 651759
End: 652367
Strand: Reverse
Name: bpmI [H]
Synonym: BMA10247_A0700
Alternate gene names: 126446745
Gene position: 652367-651759 (Counterclockwise)
Preceding gene: 126446904
Following gene: 126445792
Centisome position: 27.73
GC content: 69.79
Gene sequence:
>609_bases ATGTCATACATCATCGCGGGCCGATTGAACGAACTGCCGCCGCACGTCCAGACCGATCTCGGCGCGTATCGCTACGACGT GTTCGTGCGCCGGCTCGGCTGGACGATCGCCGGCCACTCGCTCGACGAACATGCGGAGTGGGACGAGTTCGACGGGCCGT CGACGATTCATGTCGTCGCGCTCGACGACGCGCGCGAGATCTGCGGCTACGCACGCCTGCTGCCGACGACGGGCCCGTAT CTGCTGCGCGACGTGTTTGCGCATCTGCTCGGCTCGTCGCCCGCGCCGCAATCGCCTGCCGTCTGGGAAATGTCGCGCTT CGCCGCGTCGCGGCGGCGGCGAAGCGCGACCGAGCGCGAGCCGCTCGGCATGGCGTTCTTTCCGTCGGTGCTCACGGTGG CCGCGTCGCTCGGCGCGACGCGCGTGGTCGGCGTGATGACGCCATCGATCGAACGCCTGTACCGCCGCTCGGGCATCGCG CTGCATCGCCTCGGCAACGCGATGCCGGGCGCGGGCGGCAGCCTGTCCGCATGCTCGATCGATCTGCCGCGCCTCGCGTT CGCGCCGTTGGGCCTCAAGCAGTGCGCGGCGTGCCTGGCGATGCATTGA
Upstream 100 bases:
>100_bases GAGACCGCGCACGCGTGCTTCTCGACCCTCACCGCTCATACGCGATCGGAACGCGCGCCGCCTTCGCGCCGACGATCGAT CCATCGGAGAACCAAGCGCC
Downstream 100 bases:
>100_bases CCAGGAAGGCGGGCGCATCGGGCGAGACACGCGTCTTGTCGTTTTTGCCGATGTCGACGCGCTCGCCTGACGCCATCGCC CGGTGCGTCGCGACGCCGCG
Product: autoinducer synthetase BpmI
Products: NA
Alternate protein names: Autoinducer synthesis protein rhlI [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARLLPTTGPY LLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERLYRRSGIA LHRLGNAMPGAGGSLSACSIDLPRLAFAPLGLKQCAACLAMH
Sequences:
>Translated_202_residues MSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARLLPTTGPY LLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERLYRRSGIA LHRLGNAMPGAGGSLSACSIDLPRLAFAPLGLKQCAACLAMH >Mature_201_residues SYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARLLPTTGPYL LRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERLYRRSGIAL HRLGNAMPGAGGSLSACSIDLPRLAFAPLGLKQCAACLAMH
Specific function: Required for the synthesis of BHL (N-butanoyl-L- homoserine lactone), and HHL (N-hexanoyl-L-homoserine lactone) autoinducer molecules which bind to rhlR and thus acts in elastase biosynthesis regulation [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 21944; Mature: 21812
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00949 AUTOINDUCERS_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVA CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE LDDAREICGYARLLPTTGPYLLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATERE ECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PLGMAFFPSVLTVAASLGATRVVGVMTPSIERLYRRSGIALHRLGNAMPGAGGSLSACSI CCCHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEC DLPRLAFAPLGLKQCAACLAMH CCCHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure SYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVA CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE LDDAREICGYARLLPTTGPYLLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATERE ECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PLGMAFFPSVLTVAASLGATRVVGVMTPSIERLYRRSGIALHRLGNAMPGAGGSLSACSI CCCHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEC DLPRLAFAPLGLKQCAACLAMH CCCHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7604006; 8522523; 7494482; 10984043 [H]