| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is gsiB [H]
Identifier: 126446712
GI number: 126446712
Start: 1325303
End: 1326865
Strand: Reverse
Name: gsiB [H]
Synonym: BMA10247_A1359
Alternate gene names: 126446712
Gene position: 1326865-1325303 (Counterclockwise)
Preceding gene: 126445940
Following gene: 126447251
Centisome position: 56.4
GC content: 66.03
Gene sequence:
>1563_bases ATGACCCAGCCGCATTCGTTCTTGCCGTTCTCGCCGCGCGCGCTTCTCGTCGCCTGCGCGGGCGCGATCGCGATGTCGTC CGCGCCGCTCGCGCTCGCCGAGCGCGCCGCGGTGATGGCCGTCGATTCGACGTTCACGACGCTCGATCCGTACGATTCGA ACGACACGCTGTCGCAGGCGGTGTCGAAATCGTTCTATCAGGGCCTGTTCGGCTTCGACAAGGACATGAAGCTCGTGAAC GTGCTCGCGACCGGCTACGAAGCGAGCCCCGACGCGAAGGTCTACACGATCAGGCTGCGCCAGGGCGTGAAATTCCAGGA CGGCACCGATTTCAACGCGGCCGCGGTGAAGGCGAACTTCGACCGCGTGACCGATCCGGCGAACAAGCTCAAGCGCTACA ACCTGTTCCGCCGGATCGCGAAGACCGAGGTCGTCGATCCGTACACGGCGAAGATCACGCTGACCGAGCCGTTCTCGGCG TTCATCAACGTGCTCGCGCACCCGTCGGCCGTGATGATCTCGCCCGCCGCGCTGAAGAAGTACGGGCGCGAGATCGGGCT GCATCCGGTCGGCACCGGCCCGTTCGAGCTCGTCGAATGGAAGCAGACCGACGACCTGAAGGTGAAGAAGTTCGCGGGCT ACTGGAAGGCCGGCTATCCGAAGATCGACGCGATCGACTGGAAGCCCGTCGTCGACAACAACACGCGCGCCGCGCTGATG AAGACGGGCGAGGCCGATTTCGCGTTCCGCATTCCGTTCGAGCAGACGGCCGAGCTGAAGGCGAGCCCGAAGGTCGACGT GATCGAGCGCGCGTCGATCATCCAGCGCTACGTGAGCCTGAACGTGATGCAAAAGCCGTTCGACAACCCGAAGGTTCGCC AGGCGCTGAACTACGCGGTCAACAAGGAGGCGCTCGCGAAGGTCGCGTTCGCCGGCAACGCGACGCCCGCCACCGGCATC GTGCCGCAGGGCGTCGATTACGCGGTGAAGCTCGGCCCGTGGCCGTACGATCCGGCGAAGGCGCGCGCGCTGCTCAAGGA GGCGGGCTACCCGAGCGGCTTCGAGACGACGCTCTGGTCCGCGTACAACAACTCGACGTCGCAGAAGGCGATCCAGTTCG TCCAGCAGCAGCTCGCGCAGGTCGGCGTGAAGGCGCAGGTGCAGGCGCTCGAGGCGGGCGAGCGGGTCGCGAAGGTCGAG AGCGCGCAGGACCCGGCGAAGGCGCCCGTGCGGATGTACTACATCGGCTGGTCCGCGTCGACGGGCGAGTCGGACTGGGC GATCTCGCCGCTGCTCGCGTCGTCGTCGATTCCGCCGAAGCTCGTGAATACCGCGTACTACCGGAACGATGCCGTCGACG CCGATCTCGCGAAGGCGCTCGAGACGACCGATCGCGCGAAGAAGGCCGAGCTGTACGCGGACGCGCAAAGGCGCATCTGG GCCGACGCGCCGTGGATTGCGCTCGTGCAGGAGAAGATCGTCTACGCGCGCAGCAAGCGCCTGCAGGGCGCGTACGTGAT GCCGGACGGCTCGTTCAACTTCGACGAGATCGCGATCAAGTGA
Upstream 100 bases:
>100_bases ACCACGCGACAGCAGGACCACACGACAGCAGGATCGCACGACAGCAGGATCGCACGACCCCGTCACACGCACTCACGCAG CATCGCAAAGGAGCCCACAC
Downstream 100 bases:
>100_bases GCGCGATGACGGGAGGTGGCCGGGGCGCCTCGCCGGATCGTCGCGATTTCGCCCGCCCGGGCGCGCGCGGCGCGTCGCGC GCATCGGATACCGGCGGCGC
Product: putative glutathione ABC transporter, periplasmic glutathione-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTQPHSFLPFSPRALLVACAGAIAMSSAPLALAERAAVMAVDSTFTTLDPYDSNDTLSQAVSKSFYQGLFGFDKDMKLVN VLATGYEASPDAKVYTIRLRQGVKFQDGTDFNAAAVKANFDRVTDPANKLKRYNLFRRIAKTEVVDPYTAKITLTEPFSA FINVLAHPSAVMISPAALKKYGREIGLHPVGTGPFELVEWKQTDDLKVKKFAGYWKAGYPKIDAIDWKPVVDNNTRAALM KTGEADFAFRIPFEQTAELKASPKVDVIERASIIQRYVSLNVMQKPFDNPKVRQALNYAVNKEALAKVAFAGNATPATGI VPQGVDYAVKLGPWPYDPAKARALLKEAGYPSGFETTLWSAYNNSTSQKAIQFVQQQLAQVGVKAQVQALEAGERVAKVE SAQDPAKAPVRMYYIGWSASTGESDWAISPLLASSSIPPKLVNTAYYRNDAVDADLAKALETTDRAKKAELYADAQRRIW ADAPWIALVQEKIVYARSKRLQGAYVMPDGSFNFDEIAIK
Sequences:
>Translated_520_residues MTQPHSFLPFSPRALLVACAGAIAMSSAPLALAERAAVMAVDSTFTTLDPYDSNDTLSQAVSKSFYQGLFGFDKDMKLVN VLATGYEASPDAKVYTIRLRQGVKFQDGTDFNAAAVKANFDRVTDPANKLKRYNLFRRIAKTEVVDPYTAKITLTEPFSA FINVLAHPSAVMISPAALKKYGREIGLHPVGTGPFELVEWKQTDDLKVKKFAGYWKAGYPKIDAIDWKPVVDNNTRAALM KTGEADFAFRIPFEQTAELKASPKVDVIERASIIQRYVSLNVMQKPFDNPKVRQALNYAVNKEALAKVAFAGNATPATGI VPQGVDYAVKLGPWPYDPAKARALLKEAGYPSGFETTLWSAYNNSTSQKAIQFVQQQLAQVGVKAQVQALEAGERVAKVE SAQDPAKAPVRMYYIGWSASTGESDWAISPLLASSSIPPKLVNTAYYRNDAVDADLAKALETTDRAKKAELYADAQRRIW ADAPWIALVQEKIVYARSKRLQGAYVMPDGSFNFDEIAIK >Mature_519_residues TQPHSFLPFSPRALLVACAGAIAMSSAPLALAERAAVMAVDSTFTTLDPYDSNDTLSQAVSKSFYQGLFGFDKDMKLVNV LATGYEASPDAKVYTIRLRQGVKFQDGTDFNAAAVKANFDRVTDPANKLKRYNLFRRIAKTEVVDPYTAKITLTEPFSAF INVLAHPSAVMISPAALKKYGREIGLHPVGTGPFELVEWKQTDDLKVKKFAGYWKAGYPKIDAIDWKPVVDNNTRAALMK TGEADFAFRIPFEQTAELKASPKVDVIERASIIQRYVSLNVMQKPFDNPKVRQALNYAVNKEALAKVAFAGNATPATGIV PQGVDYAVKLGPWPYDPAKARALLKEAGYPSGFETTLWSAYNNSTSQKAIQFVQQQLAQVGVKAQVQALEAGERVAKVES AQDPAKAPVRMYYIGWSASTGESDWAISPLLASSSIPPKLVNTAYYRNDAVDADLAKALETTDRAKKAELYADAQRRIWA DAPWIALVQEKIVYARSKRLQGAYVMPDGSFNFDEIAIK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=504, Percent_Identity=63.6904761904762, Blast_Score=670, Evalue=0.0, Organism=Escherichia coli, GI1789966, Length=470, Percent_Identity=30.4255319148936, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1787762, Length=532, Percent_Identity=26.5037593984962, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1787495, Length=503, Percent_Identity=25.2485089463221, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789887, Length=497, Percent_Identity=25.7545271629779, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1787551, Length=536, Percent_Identity=26.1194029850746, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI1789397, Length=486, Percent_Identity=22.8395061728395, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI87081878, Length=503, Percent_Identity=21.6699801192843, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 57110; Mature: 56978
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPHSFLPFSPRALLVACAGAIAMSSAPLALAERAAVMAVDSTFTTLDPYDSNDTLSQA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCEEECCCCCCCHHHHHH VSKSFYQGLFGFDKDMKLVNVLATGYEASPDAKVYTIRLRQGVKFQDGTDFNAAAVKANF HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCC DRVTDPANKLKRYNLFRRIAKTEVVDPYTAKITLTEPFSAFINVLAHPSAVMISPAALKK HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCEEECHHHHHH YGREIGLHPVGTGPFELVEWKQTDDLKVKKFAGYWKAGYPKIDAIDWKPVVDNNTRAALM HHHHCCCCCCCCCCHHEEEECCCCCCCHHHHHCHHCCCCCCCCCCCCCCCCCCCCCEEEE KTGEADFAFRIPFEQTAELKASPKVDVIERASIIQRYVSLNVMQKPFDNPKVRQALNYAV ECCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKEALAKVAFAGNATPATGIVPQGVDYAVKLGPWPYDPAKARALLKEAGYPSGFETTLWS CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHH AYNNSTSQKAIQFVQQQLAQVGVKAQVQALEAGERVAKVESAQDPAKAPVRMYYIGWSAS HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC TGESDWAISPLLASSSIPPKLVNTAYYRNDAVDADLAKALETTDRAKKAELYADAQRRIW CCCCCCEECHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ADAPWIALVQEKIVYARSKRLQGAYVMPDGSFNFDEIAIK CCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHEEEC >Mature Secondary Structure TQPHSFLPFSPRALLVACAGAIAMSSAPLALAERAAVMAVDSTFTTLDPYDSNDTLSQA CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCEEECCCCCCCHHHHHH VSKSFYQGLFGFDKDMKLVNVLATGYEASPDAKVYTIRLRQGVKFQDGTDFNAAAVKANF HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCC DRVTDPANKLKRYNLFRRIAKTEVVDPYTAKITLTEPFSAFINVLAHPSAVMISPAALKK HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCEEECHHHHHH YGREIGLHPVGTGPFELVEWKQTDDLKVKKFAGYWKAGYPKIDAIDWKPVVDNNTRAALM HHHHCCCCCCCCCCHHEEEECCCCCCCHHHHHCHHCCCCCCCCCCCCCCCCCCCCCEEEE KTGEADFAFRIPFEQTAELKASPKVDVIERASIIQRYVSLNVMQKPFDNPKVRQALNYAV ECCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKEALAKVAFAGNATPATGIVPQGVDYAVKLGPWPYDPAKARALLKEAGYPSGFETTLWS CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHH AYNNSTSQKAIQFVQQQLAQVGVKAQVQALEAGERVAKVESAQDPAKAPVRMYYIGWSAS HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC TGESDWAISPLLASSSIPPKLVNTAYYRNDAVDADLAKALETTDRAKKAELYADAQRRIW CCCCCCEECHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ADAPWIALVQEKIVYARSKRLQGAYVMPDGSFNFDEIAIK CCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA